Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G03
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 239 9e-64
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 234 3e-62
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 208 2e-54
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 208 2e-54
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 208 2e-54
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 158 2e-39
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 157 4e-39
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 157 4e-39
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 106 7e-24
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 106 7e-24
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 103 9e-23
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 99 8e-22
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 81 3e-16
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 74 5e-14
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 74 6e-14
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 74 6e-14
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 61 3e-10
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 51 5e-07
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 27 5.1
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 27 5.1
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 27 5.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 239 bits (584), Expect = 9e-64
Identities = 120/154 (77%), Positives = 126/154 (81%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN RALRRLRTACERAKRTLSSS+QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM
Sbjct: 256 SNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTM 315
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 316 DPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAA 375
Query: 369 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL GDKSE VQD GIETAGG
Sbjct: 376 VQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGG 409
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 234 bits (572), Expect = 3e-62
Identities = 118/154 (76%), Positives = 123/154 (79%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN RALRRLRTACERA TLSSS QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM
Sbjct: 256 SNPRALRRLRTACERANETLSSSCQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTM 315
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 316 DPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAA 375
Query: 369 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL GDKSE VQD GIETAGG
Sbjct: 376 VQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGG 409
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 208 bits (508), Expect = 2e-54
Identities = 100/153 (65%), Positives = 118/153 (77%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA+RRLRTACERAKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+E
Sbjct: 257 NPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLE 316
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 317 PVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAV 376
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L G K E ++D GIETAGG
Sbjct: 377 QAAVLSGVKDETIKDVLLVDVAPLSLGIETAGG 409
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 208 bits (508), Expect = 2e-54
Identities = 100/153 (65%), Positives = 118/153 (77%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA+RRLRTACERAKRTLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+E
Sbjct: 257 NPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLE 316
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 317 PVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAV 376
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L G K E ++D GIETAGG
Sbjct: 377 QAAVLSGVKDETIKDVLLVDVAPLSLGIETAGG 409
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 208 bits (507), Expect = 2e-54
Identities = 99/154 (64%), Positives = 119/154 (77%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN RA+RRLRTACERAKRTLSSST+A++E+DSLF+G DFY+ ITRARFEEL ADLFR T+
Sbjct: 256 SNPRAIRRLRTACERAKRTLSSSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTL 315
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
EPVEK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE
Sbjct: 316 EPVEKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAA 375
Query: 369 XXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L G K + ++D GIETAGG
Sbjct: 376 VQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGG 409
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 158 bits (384), Expect = 2e-39
Identities = 78/155 (50%), Positives = 103/155 (66%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R + RA+++LR E+AKR LS+ Q IEI+SLF+G DF ++TRA+FEELN DLFR+T
Sbjct: 281 RKDNRAVQKLRREVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRAT 340
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
++PV+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE
Sbjct: 341 LKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGA 400
Query: 366 XXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
++ G E D GIET GG
Sbjct: 401 AVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGG 433
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 157 bits (381), Expect = 4e-39
Identities = 75/155 (48%), Positives = 106/155 (68%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R +KRA+++LR E+AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T
Sbjct: 284 RKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRAT 343
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 344 LKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGA 403
Query: 366 XXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
++ G+ E+ + GIET GG
Sbjct: 404 AVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGG 436
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 157 bits (381), Expect = 4e-39
Identities = 75/155 (48%), Positives = 106/155 (68%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R +KRA+++LR E+AKR LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T
Sbjct: 284 RKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRAT 343
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 344 LKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGA 403
Query: 366 XXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
++ G+ E+ + GIET GG
Sbjct: 404 AVQGGVISGE--EDTGEIVLLDVNPLTMGIETVGG 436
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 106 bits (255), Expect = 7e-24
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
+ N RAL+R+R A E AK TLS+S+ A IE++ L GIDF I+R FE +L +T
Sbjct: 251 KGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMAT 310
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXX 362
+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 311 VIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYG 370
Query: 363 XXXXXXILHGDKSEEVQD 416
+L G +EEVQD
Sbjct: 371 AAIMAAVLSG--AEEVQD 386
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 106 bits (255), Expect = 7e-24
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
+ N RAL+R+R A E AK TLS+S+ A IE++ L GIDF I+R FE +L +T
Sbjct: 251 KGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMAT 310
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXX 362
+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 311 VIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYG 370
Query: 363 XXXXXXILHGDKSEEVQD 416
+L G +EEVQD
Sbjct: 371 AAIMAAVLSG--AEEVQD 386
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 103 bits (246), Expect = 9e-23
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRST 185
+A++RLR A E+AK LSS+TQ I + + +TRA+FE++ DL + T
Sbjct: 282 QAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRT 341
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 342 IEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGA 400
Query: 366 XXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L GD V D GIET GG
Sbjct: 401 AIQGAVLAGD----VTDVLLLDVTPLSLGIETLGG 431
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 99 bits (238), Expect = 8e-22
Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRST 185
+A++RLR A E+AK LSS+TQ I + + +TRA+FE++ DL + T
Sbjct: 282 QAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRT 341
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 342 IEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGA 400
Query: 366 XXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L GD V D GIET GG
Sbjct: 401 AIQGAVLAGD----VTDVLLLDVTPLSLGIETLGG 431
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 81.4 bits (192), Expect = 3e-16
Identities = 41/113 (36%), Positives = 66/113 (58%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
+N+RA+ + ER K+ LS++ + +I+S E ID +TR F L +D+
Sbjct: 290 TNRRAMTKFSKEAERLKQVLSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDMESRFG 349
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
EP+E++LR A++ I VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 350 EPIEQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 74.1 bits (174), Expect = 5e-14
Identities = 40/114 (35%), Positives = 66/114 (57%)
Frame = +3
Query: 3 TRSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRS 182
T NK ++++R E+ K L++ +I ++ G Y +TR FE LN DL ++
Sbjct: 286 TIDNKEDIQQIRMEVEKGKIRLTNVPSTTISLNLKTVGKWNY-ELTRDEFETLNGDLLKA 344
Query: 183 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 344
P+ +L DA +D A + +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 345 IELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 73.7 bits (173), Expect = 6e-14
Identities = 36/113 (31%), Positives = 64/113 (56%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
+N RA+ +L ER K+ LS++ +++SLFE +F +TR E++ DL
Sbjct: 277 TNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIA 336
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 337 APILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 73.7 bits (173), Expect = 6e-14
Identities = 36/113 (31%), Positives = 64/113 (56%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
+N RA+ +L ER K+ LS++ +++SLFE +F +TR E++ DL
Sbjct: 293 TNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIA 352
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 353 APILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 61.3 bits (142), Expect = 3e-10
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSS-TQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
++ R RL CER K+ +S++ T + I+ E D + R FE+L A +F
Sbjct: 260 TSPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNRI 319
Query: 186 MEPVEKSLRDAKMDKAQ-IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 362
+ + D K + I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 320 KQVLINLFADGVSIKPEEIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDEAVARG 378
Query: 363 XXXXXXIL 386
IL
Sbjct: 379 AAMQCAIL 386
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = +3
Query: 273 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 452
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 453 IETAGG 470
IET GG
Sbjct: 59 IETVGG 64
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 66 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 212
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 374 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 423
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 66 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 212
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 438 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 487
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 401 RLVAVQNCSLYGGSVCDGLVRVDGLVQLL 315
+LVA+ N L GG VC G++ D V L+
Sbjct: 373 QLVAISNRRLRGGMVCRGVICEDDTVLLV 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,946,086
Number of Sequences: 27780
Number of extensions: 184591
Number of successful extensions: 605
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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