Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G02
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -3

Query: 371 CSPVERILSRDANE-LRIECYRCSKSQRTDFYFSV 270
           C P    L R   E L+  C +C++ QRT  Y S+
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRTAAYRSI 87


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 113  LCWNILTVCVSL 148
            +CWN+L  CV L
Sbjct: 1123 ICWNVLLNCVYL 1134


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 303 RASIAFDPELVRIPRED 353
           R+   F P +VR+P ED
Sbjct: 185 RSDGTFGPFIVRVPEED 201


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 128 LTVCVSLSSSNGLILQILSWNHAIIFI 208
           +T C   S  N L+L I   + + +FI
Sbjct: 407 ITACKFFSIDNALLLSICGASSSYLFI 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,621
Number of Sequences: 336
Number of extensions: 2306
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)