Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G02
         (553 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolo...    31   2.7  
AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolo...    31   2.7  
L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchan...    31   3.6  
AY817668-1|AAV68045.1|  375|Homo sapiens arsenic (+3 oxidation s...    30   6.2  
AL358790-7|CAI52503.1|  375|Homo sapiens methyltransferase cyt19...    30   6.2  

>BC117261-1|AAI17262.1| 1332|Homo sapiens son of sevenless homolog 2
           (Drosophila) protein.
          Length = 1332

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 196 HHIYQYERDLRLVTSFESTISKI 264
           HH Y +ERDL L+   ES IS +
Sbjct: 697 HHFYDFERDLELLERLESFISSV 719


>AB209277-1|BAD92514.1| 1231|Homo sapiens son of sevenless homolog 2
           variant protein.
          Length = 1231

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 196 HHIYQYERDLRLVTSFESTISKI 264
           HH Y +ERDL L+   ES IS +
Sbjct: 727 HHFYDFERDLELLERLESFISSV 749


>L13858-1|AAA35914.1| 1332|Homo sapiens guanine nucleotide exchange
           factor protein.
          Length = 1332

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 196 HHIYQYERDLRLVTSFESTISKI 264
           HH Y +ERDL L+   ES IS +
Sbjct: 697 HHYYDFERDLELLERLESFISSV 719


>AY817668-1|AAV68045.1|  375|Homo sapiens arsenic (+3 oxidation
           state) methyltransferase protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
 Frame = -1

Query: 463 FTSRFT*KNA--VRISSDCCYYVRNSNLNSEFLVRPLKGSSLGMRTSSGSNAIDARSRNA 290
           F + FT K    V +  +    ++NS    +FL+RP+ G  L   TS G +A++ +    
Sbjct: 288 FDANFTFKEGEIVEVDEETAAILKNSRFAQDFLIRPI-GEKL--PTSGGCSALELKDIIT 344

Query: 289 LTFILA*D*FSISSIQTTSLAGDLSRTDK 203
             F LA +  S+ S      AG    T K
Sbjct: 345 DPFKLAEESDSMKSRCVPDAAGGCCGTKK 373


>AL358790-7|CAI52503.1|  375|Homo sapiens methyltransferase cyt19
           protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
 Frame = -1

Query: 463 FTSRFT*KNA--VRISSDCCYYVRNSNLNSEFLVRPLKGSSLGMRTSSGSNAIDARSRNA 290
           F + FT K    V +  +    ++NS    +FL+RP+ G  L   TS G +A++ +    
Sbjct: 288 FDANFTFKEGEIVEVDEETAAILKNSRFAQDFLIRPI-GEKL--PTSGGCSALELKDIIT 344

Query: 289 LTFILA*D*FSISSIQTTSLAGDLSRTDK 203
             F LA +  S+ S      AG    T K
Sbjct: 345 DPFKLAEESDSMKSRCVPDAAGGCCGTKK 373


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,243,355
Number of Sequences: 237096
Number of extensions: 1233738
Number of successful extensions: 1953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1953
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)