Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G01
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    72   5e-15
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    47   2e-07
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    47   2e-07
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    47   2e-07
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                46   3e-07
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    45   5e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    34   0.001
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   4.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   4.4  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   4.4  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   4.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 71.7 bits (168), Expect = 5e-15
 Identities = 41/108 (37%), Positives = 61/108 (56%)
 Frame = +1

Query: 13  ALHYLYSKLRVIHRDVKPSNILINRKGEVKMCDFGISGHLVDSVAKTIDAGCKPYMAPER 192
           A  YL+S+  +I+RD+KP N+L++ +G VK+ DFG +  L          G   Y+APE 
Sbjct: 478 AFDYLHSR-NIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEV 536

Query: 193 IDPSGDPSHYDIRSDVWSLGISLIELATGKFPYNTWGTPFEQLKQVVK 336
           I   G    +DI +D WSLG+ + EL TG  P+ T G P +    ++K
Sbjct: 537 ILNKG----HDISADYWSLGVLMFELLTGTPPF-TGGDPMKTYNIILK 579


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16  LHYLYSKLRVIHRDVKPSNILINRKGEVKMCDFGISGHLVDSVAKTIDAGCKPYMAPERI 195
           + YL+S+  ++HRDVK  N+L++ +   K+ DFG     V  +   +  G   +MAPE +
Sbjct: 710 IRYLHSQ-GLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIV--GTPVHMAPELL 766

Query: 196 DPSGDPSHYDIRSDVWSLGISLIELATG--KFPY 291
             SG   HYD   DV++ GI    L  G  + PY
Sbjct: 767 --SG---HYDSSVDVYAFGILFWYLCAGHVRLPY 795


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16   LHYLYSKLRVIHRDVKPSNILINRKGEVKMCDFGISGHLVDSVAKTIDAGCKPYMAPERI 195
            + YL+S+  ++HRDVK  N+L++ +   K+ DFG     V  +   +  G   +MAPE +
Sbjct: 748  IRYLHSQ-GLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIV--GTPVHMAPELL 804

Query: 196  DPSGDPSHYDIRSDVWSLGISLIELATG--KFPY 291
              SG   HYD   DV++ GI    L  G  + PY
Sbjct: 805  --SG---HYDSSVDVYAFGILFWYLCAGHVRLPY 833


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
 Frame = +1

Query: 10   SALHYLYSKLRVIHRDVKPSNILINRKGEVKMCDFGISGHLVDSV--AKTIDAGCKP--Y 177
            S + YL +++  +HRD+   N+L+N     K+ DFG+S  +  +   A T   G  P  +
Sbjct: 746  SGMQYL-AEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRW 804

Query: 178  MAPERIDPSGDPSHYDIRSDVWSLGISLIE-LATGKFPYNTWGTPFEQLKQVVK 336
             APE I        +   SDVWS+GI   E ++ G+ PY  W    + +K + K
Sbjct: 805  TAPEAI----AFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQ-DVIKSIEK 853


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +1

Query: 43  VIHRDVKPSNILINRKGEVKMCDFGISGHLVDSVAKTIDA--GCKPYMAPERIDPSGDPS 216
           ++H DVKP NIL+++ G+ K+ DFG S  ++      ID   G   Y APE I  +    
Sbjct: 176 IVHADVKPKNILMSKNGQPKLTDFGSS--VLIGAPNEIDKFYGTPGYTAPEVIKQNRPTP 233

Query: 217 HYDIRSDVWSLGISLIELATGKFPY 291
                +D++SLGI   ++   K P+
Sbjct: 234 ----AADIYSLGIVAWQMLFRKLPF 254


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 45.2 bits (102), Expect = 5e-07
 Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
 Frame = +1

Query: 43  VIHRDVKPSNILINRKGE---VKMCDFGISGHLVDSVAKTID-AGCKPYMAPE--RIDPS 204
           V+HRD+KP N+L+  K +   VK+ DFG++  +          AG   Y++PE  + +P 
Sbjct: 30  VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLKKEPY 89

Query: 205 GDPSHYDIRSDVWSLGISLIELATGKFPYNTWGTPFEQLKQVVKD---DPPRLPXWE 366
           G P       D+W+ G+ L  L  G  P+  W     +L   +K    D P  P W+
Sbjct: 90  GKP------VDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKTGSYDYPS-PEWD 137


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +1

Query: 16  LHYLYSKLRVIHRDVKPSNILINRKGEVKMCDFGI--SGHLVDSVAKT 153
           L +L+ +  +++RD+K  N+L+++ G +K+ DFG+   G   D   KT
Sbjct: 98  LFFLHGR-GIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKT 144


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  YLYSKLRVIHRDVKPSNILINRKGEVKMCDFGI 120
           Y Y  + VIH+D+ P N +   +G +K C  G+
Sbjct: 121 YRYEAVAVIHKDL-PINNVQGLRG-LKSCHTGV 151


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  YLYSKLRVIHRDVKPSNILINRKGEVKMCDFGI 120
           Y Y  + VIH+D+ P N +   +G +K C  G+
Sbjct: 121 YRYEAVAVIHKDL-PINNVQGLRG-LKSCHTGV 151


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 22  YLYSKLRVIHRDVKPSNILINRKGEVKMCDFGI 120
           Y Y  + VIH+D+ P N +   +G +K C  G+
Sbjct: 121 YRYEAVAVIHKDL-PINNVQGLRG-LKSCHTGV 151


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 LVDSVAKTIDAGCKPYMAPERIDP 201
           L++++  T +A C P+  P  I+P
Sbjct: 33  LMNTMTHTTNAFCLPFCGPNVINP 56


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 130 LVDSVAKTIDAGCKPYMAPERIDP 201
           L++++  T +A C P+  P  I+P
Sbjct: 32  LMNTMTHTTNAFCLPFCGPNVINP 55


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 18  SLPVFKTQGHTQR 56
           SLP FK  GH QR
Sbjct: 184 SLPQFKVLGHRQR 196


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 18  SLPVFKTQGHTQR 56
           SLP FK  GH QR
Sbjct: 123 SLPQFKVLGHRQR 135


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 94  EVKMCDFGISGHLVDSVAKTID 159
           E+++ D   SG+L+D   K ID
Sbjct: 333 EMRLMDAIDSGYLIDEYGKKID 354


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 94  EVKMCDFGISGHLVDSVAKTID 159
           E+++ D   SG+L+D   K ID
Sbjct: 333 EMRLMDAIDSGYLIDEYGKKID 354


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 325 VSVAQTESPTCCKGTCPSLAR 263
           V+  +T    CCKG C  L +
Sbjct: 448 VTDGETTKTFCCKGYCMDLLK 468


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 92  PFLLISIFEGFTSLCM 45
           PF +++++ GF S C+
Sbjct: 350 PFFVVNLWSGFCSQCI 365


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 540 RYREQVCRLLRRFI 581
           R REQV   LRRF+
Sbjct: 434 RTREQVTEALRRFV 447


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 540 RYREQVCRLLRRFI 581
           R REQV   LRRF+
Sbjct: 349 RTREQVTEALRRFV 362


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 540 RYREQVCRLLRRFI 581
           R REQV   LRRF+
Sbjct: 668 RTREQVTEALRRFV 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,388
Number of Sequences: 438
Number of extensions: 4566
Number of successful extensions: 29
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)