Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F24
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    29   0.036
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   0.44 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.5  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.036
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = +3

Query: 123 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 302
           +P  PA  P+   K   V+ + +R       ++MP ++ W  P    + P+ NS+P++V+
Sbjct: 39  RPLIPATAPQKPDKWEDVMADIER-------VIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 334 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 435
           RC    ++ GS+ WQ  +SC    +  E  ++V+
Sbjct: 68  RCASYIQVSGSKIWQMERSCMCCQESGEREASVS 101


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 278  PGRTPHTGAWREP 240
            PG  P T +W++P
Sbjct: 1157 PGHKPSTSSWQKP 1169


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/41 (19%), Positives = 21/41 (51%)
 Frame = -3

Query: 343 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 221
           ++ D  ++PH+  G    G++  + +  +    N+ + GG+
Sbjct: 313 FWDDEQQVPHIVKGNQWLGFDDPKSIQVKVEFANEKNLGGV 353


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 313 VTHGETTEGWEFLEGLHTQG 254
           VT G   EG+   E LH +G
Sbjct: 36  VTEGWDEEGYHTPESLHYEG 55


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -3

Query: 343 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 221
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -3

Query: 343 YYTDGDRLPHVTHGETTEGWEFLEGLHTQGLGGNQVDNGGI 221
           ++ D  ++PH+  G    G++  + +  +    N  + GG+
Sbjct: 314 FWDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKNLGGV 354


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 48  KSAAPLGGLFFESP 7
           K+ +P GG  FE+P
Sbjct: 396 KAPSPYGGQMFEAP 409


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 446 YIQLRYFIHRKVFRRKEGLQTHSFSIFFT 532
           Y+   YF+ R    +   + +H   IFFT
Sbjct: 146 YLLFDYFVQRNQEYKYYQILSHLSGIFFT 174


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 272 FQEFPPLGRFAVRDMR 319
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,487
Number of Sequences: 336
Number of extensions: 3365
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)