Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F22
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 230 3e-60
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 230 3e-60
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 230 3e-60
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 230 3e-60
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 230 3e-60
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 230 3e-60
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 5e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 1.9
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.3
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.3
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 4.3
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 4.3
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 4.3
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 4.3
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 30 5.7
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 30 5.7
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 30 5.7
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 30 5.7
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 30 5.7
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 7.5
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 7.5
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 7.5
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 7.5
U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase pr... 29 9.9
U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase pr... 29 9.9
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 24 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 51
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 47 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 106
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 107 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 166
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 167 KVETFSGVYKKLTGKDVNFEFPE 189
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 36 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 49
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 24 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 51
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 24 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 51
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 24 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 51
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 230 bits (563), Expect = 3e-60
Identities = 108/143 (75%), Positives = 129/143 (90%), Gaps = 1/143 (0%)
Frame = +2
Query: 167 QEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
+EIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+
Sbjct: 49 KEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKS 108
Query: 344 RVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEH 523
R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH
Sbjct: 109 RTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEH 168
Query: 524 KVDTFQSVYKKLTGREVTFEFPE 592
KV+TF VYKKLTG++V FEFPE
Sbjct: 169 KVETFSGVYKKLTGKDVNFEFPE 191
Score = 64.9 bits (151), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 24 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKKL 176
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AK++
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEI 51
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 5e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 374 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 529
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 546 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 367
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 366 L 364
L
Sbjct: 323 L 323
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.3
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +2
Query: 185 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 364
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 365 RPRSRTLTSVYDAILEDLVFP 427
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 182 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 289
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 182 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 289
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 182 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 289
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 182 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 289
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 182 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 289
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 470 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 553
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 470 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 553
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 470 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 553
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 470 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 553
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
>U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase
protein.
Length = 369
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -1
Query: 409 QYGVIYRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 236
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 235 ECL 227
+CL
Sbjct: 140 KCL 142
>U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase
protein.
Length = 321
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -1
Query: 409 QYGVIYRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 236
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 235 ECL 227
+CL
Sbjct: 140 KCL 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,594,328
Number of Sequences: 237096
Number of extensions: 2106847
Number of successful extensions: 4762
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4753
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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