Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F19
(569 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p pro... 182 3e-46
AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic t... 182 3e-46
AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-P... 182 3e-46
AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p pro... 117 1e-26
AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA... 117 1e-26
>BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p
protein.
Length = 560
Score = 182 bits (443), Expect = 3e-46
Identities = 94/183 (51%), Positives = 114/183 (62%), Gaps = 16/183 (8%)
Frame = +3
Query: 69 MSEHVLPAEEPIRFIAPIIQDNPTGWGPCEMPDQFRDMPYQPFSKGDRLGKISDWTVVQ- 245
MSE + A + F P +Q N GWGPCE+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 246 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPPYQ------XXXXXXXXXX 404
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKPP+Q
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 405 XXXXXXXXXXMTTLN----KQRD----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 560
MTTL+ K RD R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 561 DFP 569
DFP
Sbjct: 181 DFP 183
>AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic
translation initiationfactor 3 p66 subunit protein.
Length = 560
Score = 182 bits (443), Expect = 3e-46
Identities = 94/183 (51%), Positives = 114/183 (62%), Gaps = 16/183 (8%)
Frame = +3
Query: 69 MSEHVLPAEEPIRFIAPIIQDNPTGWGPCEMPDQFRDMPYQPFSKGDRLGKISDWTVVQ- 245
MSE + A + F P +Q N GWGPCE+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 246 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPPYQ------XXXXXXXXXX 404
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKPP+Q
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 405 XXXXXXXXXXMTTLN----KQRD----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 560
MTTL+ K RD R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 561 DFP 569
DFP
Sbjct: 181 DFP 183
>AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-PB
protein.
Length = 560
Score = 182 bits (443), Expect = 3e-46
Identities = 94/183 (51%), Positives = 114/183 (62%), Gaps = 16/183 (8%)
Frame = +3
Query: 69 MSEHVLPAEEPIRFIAPIIQDNPTGWGPCEMPDQFRDMPYQPFSKGDRLGKISDWTVVQ- 245
MSE + A + F P +Q N GWGPCE+PD F+D+PYQPFSK DRLGKI DWT
Sbjct: 1 MSETINTAAQFPSFEKPTVQFNEKGWGPCELPDTFKDVPYQPFSKNDRLGKICDWTNTSN 60
Query: 246 -DKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPPYQ------XXXXXXXXXX 404
DKKYQNKYAS FG G Y+Y+H+EDE+TFHLVDT RVQKPP+Q
Sbjct: 61 NDKKYQNKYASSFGTGIQYSYYHEEDETTFHLVDTARVQKPPHQRGRFRNMRNSRSGRGR 120
Query: 405 XXXXXXXXXXMTTLN----KQRD----RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDM 560
MTTL+ K RD R +GK++G RG P K+R++SV VR W +IE+M
Sbjct: 121 NARGGLNTHGMTTLSGKNVKARDPRHGRGMGKKFGHRGPPPKMRESSVAVRADWASIEEM 180
Query: 561 DFP 569
DFP
Sbjct: 181 DFP 183
>AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p
protein.
Length = 551
Score = 117 bits (282), Expect = 1e-26
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 FIAPIIQDNPTGWGPCEMPDQFRDMPYQPFSKGDRLGKISDWT-VVQDKKYQNKYASQFG 284
FI P ++ N GWGPCE+P+ D+PYQPF K DRLGKI DWT +V +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 285 AGSSYAYFHDEDESTFHLVDTTRVQ-KPPYQ 374
S YAYF+++D+STFHLVDTT + PYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 447 NKQRDRKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFP 569
N + + +G+R+G R AP +IR++SV V+ WV+IE++DFP
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFP 182
>AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA
protein.
Length = 551
Score = 117 bits (282), Expect = 1e-26
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 FIAPIIQDNPTGWGPCEMPDQFRDMPYQPFSKGDRLGKISDWT-VVQDKKYQNKYASQFG 284
FI P ++ N GWGPCE+P+ D+PYQPF K DRLGKI DWT +V +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 285 AGSSYAYFHDEDESTFHLVDTTRVQ-KPPYQ 374
S YAYF+++D+STFHLVDTT + PYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 447 NKQRDRKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFP 569
N + + +G+R+G R AP +IR++SV V+ WV+IE++DFP
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFP 182
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,411,220
Number of Sequences: 53049
Number of extensions: 556537
Number of successful extensions: 1277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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