Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F19
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical pr...    64   9e-11
U13642-1|AAG00041.1|  184|Caenorhabditis elegans Yeast ham (hydr...    29   1.8  
AY052772-1|AAL14111.1|  184|Caenorhabditis elegans HAM-1-like pr...    29   1.8  
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,...    28   5.4  
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,...    28   5.4  
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,...    28   5.4  
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,...    28   5.4  
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,...    28   5.4  
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip...    28   5.4  
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip...    28   5.4  
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip...    28   5.4  
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip...    28   5.4  
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip...    28   5.4  
Z92785-2|CAB07200.1|  344|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF016421-10|AAC25792.1|  473|Caenorhabditis elegans Hypothetical...    27   9.5  

>Z12017-3|CAA78049.1|  570|Caenorhabditis elegans Hypothetical
           protein R08D7.3 protein.
          Length = 570

 Score = 63.7 bits (148), Expect = 9e-11
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
 Frame = +3

Query: 123 IQDNPTGWGPCEMPDQFRD-MPYQPFSKGDRLGKISDWTVVQ------DKKYQNK-YASQ 278
           + DN  GWGP        + +P+Q F+K DR+G+++DW  V       +++Y  + Y S 
Sbjct: 11  LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70

Query: 279 FGAGSSYAYFHDEDESTFHLVDTTR 353
             AGS + Y H  DE  F LVDT++
Sbjct: 71  ANAGSQFDYIHGMDEHNFQLVDTSK 95



 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 450 KQRDRKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMD 563
           +Q  R  G R+G  G   K R  SV VRP WV +E+M+
Sbjct: 157 RQGQRGQGGRFG--GDRPKERLPSVQVRPEWVVLEEMN 192


>U13642-1|AAG00041.1|  184|Caenorhabditis elegans Yeast ham
           (hydroxylaminopurinesensitivity) related protein 1
           protein.
          Length = 184

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 78  HVLPAEEPIRFIAPIIQDNPTGWGPCEMPDQFRD 179
           HV   + P + +AP   D   GW PC  PD F++
Sbjct: 122 HVFAGKCPGQIVAPR-GDTAFGWDPCFQPDGFKE 154


>AY052772-1|AAL14111.1|  184|Caenorhabditis elegans HAM-1-like
           protein protein.
          Length = 184

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 78  HVLPAEEPIRFIAPIIQDNPTGWGPCEMPDQFRD 179
           HV   + P + +AP   D   GW PC  PD F++
Sbjct: 122 HVFAGKCPGQIVAPR-GDTAFGWDPCFQPDGFKE 154


>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2857

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2836

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 230 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 288

Query: 351 RVQKPP 368
             Q PP
Sbjct: 289 PKQNPP 294


>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 286 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 344

Query: 351 RVQKPP 368
             Q PP
Sbjct: 345 PKQNPP 350


>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
           triphosphate receptorprotein 1, isoform g protein.
          Length = 1713

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
           triphosphate receptorprotein 1, isoform e protein.
          Length = 2857

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
           triphosphate receptorprotein 1, isoform f protein.
          Length = 2846

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 240 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 298

Query: 351 RVQKPP 368
             Q PP
Sbjct: 299 PKQNPP 304


>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
           triphosphate receptorprotein 1, isoform d protein.
          Length = 2836

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 230 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 288

Query: 351 RVQKPP 368
             Q PP
Sbjct: 289 PKQNPP 294


>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
           triphosphate receptorprotein 1, isoform a protein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 171 FRDMPYQPFSKGDRLGKISDWTVVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTT 350
           F  + +Q  ++ + L + ++W V     +     +   +G     FH  D+ TF  +DT 
Sbjct: 286 FNLLDHQSAAEVNCLNEPTEWQVFMFLLFDENQQNSVKSGDVVRLFH-ADQQTFLTLDTI 344

Query: 351 RVQKPP 368
             Q PP
Sbjct: 345 PKQNPP 350


>Z92785-2|CAB07200.1|  344|Caenorhabditis elegans Hypothetical
           protein F31E9.4 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 315 HHGNRHMKNRHQTVMHTYS-GTSYLA 241
           HHG +H++N  +  ++T S G+SY+A
Sbjct: 85  HHGLKHLENLFKVSLNTLSFGSSYMA 110


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 342 PPSGRCFHLHHGNRHMKNRHQTVMH 268
           PP     H HH ++H  ++HQ  +H
Sbjct: 423 PPHQHPIHHHHQSQHQLHQHQQYLH 447


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 342 PPSGRCFHLHHGNRHMKNRHQTVMH 268
           PP     H HH ++H  ++HQ  +H
Sbjct: 390 PPHQHPIHHHHQSQHQLHQHQQYLH 414


>Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical
           protein C38D9.8 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 315 HHGNRHMKNRHQTVMHTYS-GTSYLA 241
           HHG +H++N  +  ++T S G+SY+A
Sbjct: 85  HHGLKHLENLFKVSLNTLSFGSSYMA 110


>AF016421-10|AAC25792.1|  473|Caenorhabditis elegans Hypothetical
           protein F44E7.7 protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = -2

Query: 166 SGISHGPHPVGLS*IIGAMNLIGSSAGNTCSDIICSSLNLKFPISQHVGM*APLV 2
           SG++ G   +GL  ++  ++ IG     T   II ++ +L FP+S H+G  A  +
Sbjct: 101 SGVAIGA-VIGLLPLVPMLDNIGLRITFTLFGIISAASSLLFPLSVHMGFYAVFI 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,435
Number of Sequences: 27780
Number of extensions: 276526
Number of successful extensions: 634
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)