Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F19
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.1  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   2.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   8.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 374 TRTCSWTARSWR 409
           T+ C+W AR W+
Sbjct: 298 TKPCTWAARPWQ 309


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 374 TRTCSWTARSWR 409
           T+ C+W AR W+
Sbjct: 298 TKPCTWAARPWQ 309


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 374 TRTCSWTARSWR 409
           T+ C+W AR W+
Sbjct: 298 TKPCTWAARPWQ 309


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 242 HNCPVTYFA*AVSFTKRLVGHIP 174
           ++C     A  VS T+RLV H+P
Sbjct: 683 YSCVARNLAAEVSHTQRLVVHVP 705


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 477 SCRVCGHVACSK 442
           +C++CG V CSK
Sbjct: 7   TCQLCGKVLCSK 18


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 450 KQRDRKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFP 569
           K++ R L    G     ++I     T+RP + T++  ++P
Sbjct: 93  KKKKRSLMGAQGLSIRGLQINHEDETIRPVFSTLQRAEYP 132


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 109  NLIGSSAGNTCSDIICSSLNLKFPISQHV 23
            +L+G +      D+I  S+++KF   Q V
Sbjct: 937  SLVGKTVAVNFRDVIAKSISVKFQEGQTV 965


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 68  NVGTCVTG*RANKIHSANN 124
           NV TCV   R   +H+A N
Sbjct: 71  NVSTCVVIARNKSMHTATN 89


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 63  HIMSEHVLPAEEPI 104
           HI + H  P++EPI
Sbjct: 21  HIQNVHTRPSKEPI 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,725
Number of Sequences: 438
Number of extensions: 3257
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)