Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F18
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 213 IEICCYYVFRYIFKYMLLFTMWLIFYMYLRFVTLSLC 323
           I + C Y F Y F    +  + L+   Y  ++ L  C
Sbjct: 233 IILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 243 YIFKYMLLFTMWLIFYMYL 299
           Y +   ++FT+ L+FY  L
Sbjct: 214 YFYSAFIIFTIHLLFYCVL 232


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 487 SPLVRKWSRWCVTIFFLIFGKVV 555
           +P  +K S W VTIF ++   V+
Sbjct: 130 APEEKKRSFWAVTIFLVLAASVI 152


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = -2

Query: 355 GVPEVIN*TQLQSDNVTNLKYI*KISHIVNNSIYLNMYRNT**QHISISQGFIIW*TI 182
           G+  +IN ++  +   T L +  KI H+VN  ++ N+ +     +   S   ++W T+
Sbjct: 206 GIQALINDSRKVTRFPTELTFCNKIKHLVN--LHKNLVKVAKDHNSLYSLHLLLWITV 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,882
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)