Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F18
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               24   1.0  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   3.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 258 MLLFTMWLIFYMYLRFVTLSLC 323
           +LLFT+ ++ YM +R   ++LC
Sbjct: 6   ILLFTLCIVSYMMVRCDDITLC 27


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 15  PHYPLRHHRYTHIVVSFLS---SLVYAVRAIMC 104
           P  PLRH R T  V+S+ S   S+ ++  AI C
Sbjct: 53  PLLPLRHRRVTCDVLSWQSKWLSINHSACAIRC 85


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 276 WLIFYMYLRFVTLSL 320
           WL+  +YL F TL L
Sbjct: 135 WLLLMLYLLFATLPL 149


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = -1

Query: 533  KKIVTHQRDHLRTSGL 486
            K++VT+Q+  ++TSG+
Sbjct: 1067 KRVVTNQQQSIQTSGM 1082


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 15  PHYPLRHHRYTH 50
           PH  L HH+ TH
Sbjct: 810 PHQQLHHHQSTH 821


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,857
Number of Sequences: 438
Number of extensions: 3585
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)