Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F17
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18) 41 7e-04
SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36) 40 0.001
SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45) 40 0.002
SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 38 0.005
SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18) 37 0.011
SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 36 0.025
SB_43675| Best HMM Match : K_tetra (HMM E-Value=0) 35 0.043
SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17) 35 0.057
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45) 34 0.075
SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.099
SB_42912| Best HMM Match : K_tetra (HMM E-Value=7.20267e-43) 34 0.099
SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34) 33 0.13
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39) 33 0.23
SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38) 33 0.23
SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38) 33 0.23
SB_4594| Best HMM Match : K_tetra (HMM E-Value=5.6e-24) 31 0.53
SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44) 31 0.70
SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37) 31 0.92
SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40) 30 1.6
SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5) 29 2.1
SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34) 29 2.8
SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18) 29 2.8
SB_21396| Best HMM Match : CHGN (HMM E-Value=3e-16) 29 2.8
SB_58498| Best HMM Match : Mtc (HMM E-Value=3.00004e-41) 29 3.7
SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 29 3.7
SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37) 28 4.9
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 28 4.9
SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31) 28 4.9
SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21) 27 8.6
SB_33226| Best HMM Match : ubiquitin (HMM E-Value=5.6) 27 8.6
SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 8.6
SB_1942| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_43248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSMIPALNNLIE 550
D AY IDR P YF P+LNYLRHG +I+D++++ GVLEEA FY I+ ++ + IE
Sbjct: 513 DEDDAYMIDRDPRYFFPVLNYLRHGKLIIDRDLHEEGVLEEAEFYSIEPLVKMIKERIE 571
>SB_23998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 727
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +1
Query: 121 RVLRDEESIYINLHEKNCDKVEENVVNLCLEQKAKTMTEWITLNVGGKHFTTSRSTLTAK 300
R+L+D+ +IYI+LH V +L + + +TLNVGG FTT STLT K
Sbjct: 52 RLLKDDVTIYIHLHI---------VSHLLIIPSKMAIPAVVTLNVGGHFFTTRLSTLT-K 101
Query: 301 EPQSMLARMFASENNV 348
+ SMLA MF+ N+
Sbjct: 102 DQDSMLASMFSGRFNL 117
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSMIPAL 535
DS G +FIDR YF +LNYLR + +V V EA +Y I+ ++ L
Sbjct: 120 DSEGRFFIDRDGTYFVFLLNYLRDPSQLPPASV-AMQVYREAQYYRIEGLMAML 172
>SB_13351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 362 PSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTG-VLEEASFYGIDSMIPALN 538
P DS+G +FIDR F ILN+LR ++ L N +L EA FY I+ +I +
Sbjct: 310 PVNRDSNGRFFIDRDGTLFRYILNFLRSNVLSLPANFKDYELLLNEADFYQIEPLIEEIK 369
Query: 539 NL 544
+
Sbjct: 370 RI 371
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +1
Query: 241 ITLNVGGKHFTTSRSTLTAKEPQSMLARMFA 333
I LNVGG HFTT+ TLT P SML MF+
Sbjct: 277 IDLNVGGNHFTTTLLTLTT-FPDSMLGSMFS 306
>SB_13524| Best HMM Match : K_tetra (HMM E-Value=3.7e-18)
Length = 495
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 377 SSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTG-VLEEASFYGIDSMIPALNNLIEE 553
+ G YFI+R P +F ILN++R GI L ++ +L EA FY ++ L
Sbjct: 55 ADGCYFINRDPKHFRYILNFIRTGIANLPEDAKSLNEILLEARFYPASGLLEHLTQPFML 114
Query: 554 SKSGC 568
K C
Sbjct: 115 LKGRC 119
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 199 NLCLEQKAKTMTEW-ITLNVGGKHFTTSRSTL 291
+L ++ + +W + LN+GGKHFT SR TL
Sbjct: 3 DLVFQKLDEIKLQWPVHLNIGGKHFTVSRRTL 34
>SB_18562| Best HMM Match : K_tetra (HMM E-Value=9.8e-36)
Length = 407
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
+ SG YF DR P F +LNYL+ G + +NV +E +++GID
Sbjct: 66 EESGEYFFDRHPAVFAQVLNYLQTGKLHCPRNVCGPLFEQELAYWGID 113
>SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45)
Length = 727
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 338 KIMCTLMNPSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
+ C P S+G YF DR P F +LNY R G + +V +E F+GID
Sbjct: 161 RCFCRYAPPHFDPSTGEYFFDRHPGVFANVLNYYRTGKLHCPLDVCGPLFEDELGFWGID 220
>SB_27575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
YFIDR P F +LNY R+G + + P EE +FYG+
Sbjct: 102 YFIDRDPYLFRFVLNYYRNGRLHCSQEDCPAAFEEELNFYGL 143
>SB_36328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/52 (42%), Positives = 25/52 (48%)
Frame = +2
Query: 362 PSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
P S YF DR FE ILNY R G + + V EE SF+GID
Sbjct: 54 PEYDTSHNEYFFDRHSAIFEDILNYYRTGKLHCPRGVCSAVFEEELSFWGID 105
>SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 368 ATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLE-EASFYGIDSMIPAL 535
A D+ G +FIDR + F ILN+LR + L + + L EA FY I+ +I AL
Sbjct: 44 ARDTRGNFFIDRDGSLFRYILNFLRTSELCLPDSFDEFQQLSLEADFYQIEDLIKAL 100
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 241 ITLNVGGKHFTTSRSTLTAKEPQSMLARMFASENNV 348
+ LNVGG +TTS TLT + SML MF+ N+
Sbjct: 9 VNLNVGGYVYTTSYKTLT-RCRDSMLGAMFSGRQNL 43
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 383 GAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
G YF DR P F +LNY R G + +V T EE S++GI+
Sbjct: 62 GEYFFDRHPRIFAEVLNYYRTGKLHCPGDVCSTLFQEELSYWGIN 106
>SB_27579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDS 520
YFIDR P+ F ILNY R+G + EE +FYGI S
Sbjct: 113 YFIDRDPHLFRYILNYYRNGKLHRSLEDCTESFEEELTFYGIRS 156
>SB_51344| Best HMM Match : K_tetra (HMM E-Value=6e-18)
Length = 307
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 344 MCTLMNPSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNP-TGVLEEASFYGIDS 520
MC + P D G FIDR F IL +LR G + + + +L EA FY ++
Sbjct: 112 MCNGIIPVPRDLKGQQFIDRDGATFRYILTFLRTGKLTVPEGYKYFRELLTEAEFYRLEP 171
Query: 521 MIPALNNLIEESK 559
++ + I+E +
Sbjct: 172 LVELIKGKIKEGE 184
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +1
Query: 208 LEQKAKTMTEWITLNVGGKHFTTSRSTLTAKEPQSMLARM 327
LEQ+ ++LNVGG ++T++ TLT + P+S+LA+M
Sbjct: 74 LEQQLLVFPSVVSLNVGGYNYTSTAYTLT-QYPKSVLAQM 112
>SB_9898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 350 TLMNPSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
++ +P +F DR+P+ F +LNY R G + ++V EE +F+GID
Sbjct: 50 SMKDPRPLAQRREFFFDRNPSIFTHVLNYYRTGKLHCPRDVCGPLFEEELAFWGID 105
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 377 SSGAYFIDRSPNYFEPILNYLRHGIV---ILDKNVNPTGVLEEASFYGIDSMIPALNNLI 547
S +YF+DR +F ILNYLR G + V + +EA+FY + +I ++ ++
Sbjct: 122 SDESYFLDRDGTHFRHILNYLRDGFLAETFPTDEVILKEIQQEANFYQLTGLIDSIEAML 181
>SB_43675| Best HMM Match : K_tetra (HMM E-Value=0)
Length = 794
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 350 TLMNPSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
T NP +F DR P F I+N+ R G + +V EE F+GID
Sbjct: 47 TRNNPDYDPEKNEFFFDRHPGVFAQIMNFYRTGKLHAPHDVCGPLFQEELMFWGID 102
>SB_47716| Best HMM Match : K_tetra (HMM E-Value=1.5e-17)
Length = 271
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +1
Query: 223 KTMTEWITLNVGGKHFTTSRSTLTAKEPQSMLARMFASENN 345
K E I LNVGGK+F+TS TLT + S+L R+F+ +
Sbjct: 32 KLFPENIELNVGGKYFSTSVFTLT-RIKDSLLGRIFSGRQS 71
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLE-EASFYGIDSMIPALNNL 544
D+SG YFIDR + F IL+YLR + + + + L+ EA FY ++ + L+ L
Sbjct: 76 DNSGKYFIDR--DGFLYILDYLRSKALHIPEKFDEIERLKMEADFYELEDLRQRLDRL 131
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
YF DR P F ILNY R G + +V EE ++GID
Sbjct: 1243 YFFDRHPGVFAHILNYYRTGKLHCPNDVCGPVFEEELQYWGID 1285
>SB_13958| Best HMM Match : K_tetra (HMM E-Value=7.00649e-45)
Length = 623
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
YF DR P+ F +LNY R+G + + + +E F+GI
Sbjct: 80 YFFDRDPDLFRHLLNYYRNGKLHYPRGECVSSFEDELEFFGI 121
>SB_50701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 33.9 bits (74), Expect = 0.099
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLE-EASFYGIDSMIPALNNLIE 550
DS G +FIDR F IL+YLR+ + L + N L EA + + M+ A+ +
Sbjct: 125 DSRGRFFIDRDGVLFRYILDYLRNCKLALPEGFNERERLTMEAEHFKLKGMVRAIQREKD 184
Query: 551 ESKS 562
KS
Sbjct: 185 NIKS 188
>SB_42912| Best HMM Match : K_tetra (HMM E-Value=7.20267e-43)
Length = 523
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 362 PSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSM 523
P ++ +F DR P F +LN+ R G + +V +E +F+GID +
Sbjct: 320 PEFDPNTSEFFFDRHPGVFAQVLNFYRTGKLHCPNDVCGPLFEDELAFWGIDEL 373
>SB_11146| Best HMM Match : K_tetra (HMM E-Value=1.1e-34)
Length = 336
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
+F DR P+ F ILNYLR G + + +L+E F+ I
Sbjct: 111 FFFDRDPDVFRYILNYLRSGRLHVSDEECFNSLLDELEFFHI 152
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 371 TDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVL-EEASFYGIDSMIPALNNLI 547
TDS G IDR +F ILN+LR G + L + + L E+ +Y I+ ++ L+
Sbjct: 54 TDSDGWILIDRCGKHFGTILNFLRDGSIPLPQCESELRELCTESKYYLIEQLVNQCEALL 113
Query: 548 EESK 559
+ +
Sbjct: 114 AKKQ 117
>SB_11649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 392 FIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
F DR P F+ +LNY R G + +V EE +++GID
Sbjct: 57 FFDRHPKIFDQVLNYYRTGKLHCPNDVCGPLFEEELAYWGID 98
>SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39)
Length = 218
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 350 TLMNPSATDSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSM 523
++MN + F DR P+ F ILNY R G + ++ +E F+GI+ M
Sbjct: 46 SIMNKQSEQPRKEIFFDRHPDLFAIILNYYRTGKLHAPRDCCGPLFEDELVFWGIEEM 103
>SB_6747| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 404
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
+F+DR P+ F ILN+ R G + + EE FYGI
Sbjct: 67 FFLDRDPHMFRYILNFYRCGKLHTSSEDCYSAFKEELGFYGI 108
>SB_46471| Best HMM Match : K_tetra (HMM E-Value=1e-38)
Length = 347
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
+F+DR P+ F ILN+ R G + + EE FYGI
Sbjct: 67 FFLDRDPHMFRYILNFYRCGKLHTSSEDCYSAFKEELGFYGI 108
>SB_4594| Best HMM Match : K_tetra (HMM E-Value=5.6e-24)
Length = 303
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGID 517
D+ YF DR P F +LN+ R G + + EE F+GID
Sbjct: 113 DNKREYFFDRHPTAFCQVLNFYRTGKLHCPTEMCGPMFEEELIFWGID 160
>SB_12940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 392 FIDRSPNYFEPILNYLRHGIVILDKNVNPTG-VLEEASFYGIDSM 523
F+DR P F +LN++R + L +N +L EA++Y I+ +
Sbjct: 45 FLDRDPKVFRHVLNFIRDERLSLPENFKEYELLLREATYYQIEGI 89
>SB_18563| Best HMM Match : K_tetra (HMM E-Value=4.34403e-44)
Length = 191
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 392 FIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSM 523
F DR P F +LNY R G + +V EE +F+GI+ +
Sbjct: 75 FFDRHPGVFANVLNYYRTGKLHCPGDVCGPLFEEELAFWGIEEL 118
>SB_25131| Best HMM Match : Ion_trans (HMM E-Value=1.9e-37)
Length = 464
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGI 514
YF+DR P+ F ILNY + G + L +E F+GI
Sbjct: 110 YFLDRDPHIFRYILNYYKVGKLHLSYEDCFDSFHQELLFFGI 151
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 241 ITLNVGGKHFTTSRSTLTAKEPQSMLAR-----MFASENNVYXNES*CHRFQWRLFYRQK 405
+TLNV G+ F T STL K P ++L F E Y + H F++ L Y +
Sbjct: 70 VTLNVSGRRFCTWESTL-KKYPNTLLGSDALNLYFDKEKREYFLDRDPHIFRYILNYYKV 128
Query: 406 S*LF*TYFELLETRYSDI 459
L +Y + ++ + ++
Sbjct: 129 GKLHLSYEDCFDSFHQEL 146
>SB_10560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 256 GGKHFTTS--RSTLTAKEPQSMLARMFASENNVYXNES*CHRFQWR 387
GG HF + S + S+L M+A +NV N C WR
Sbjct: 127 GGTHFVNAFVTSPICCPSRSSILTGMYAHNHNVLTNNVNCSSLSWR 172
>SB_34101| Best HMM Match : K_tetra (HMM E-Value=3.5e-40)
Length = 440
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHG 448
YF DR P +F +LNY R G
Sbjct: 86 YFFDRDPVFFRHVLNYYRKG 105
>SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5)
Length = 424
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +1
Query: 13 VEDSIVTLKKEISKLFQVPEEILRLFTINECEINDVRVLRDEESIYINLHEKNCDKVEEN 192
++++++ K+E + F + EE +NEC+ N + RDE ++ C + N
Sbjct: 175 IKNNMMVFKRE-QEQFLLQEEQRMSKALNECDSNRRYINRDELCQVHGTNKHTCSIIPCN 233
Query: 193 VVNLCLE-QKAKT--MTEWITLNVGGKHFTTSRSTLTAKEPQSML 318
+E K T + + +N G + + + AK+ Q M+
Sbjct: 234 TTERAIEILKNPTFRVRHGVIINTGVNDVESQPANIVAKKQQQMV 278
>SB_57208| Best HMM Match : Ion_trans (HMM E-Value=5.5e-34)
Length = 722
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 389 YFIDRSPNYFEPILNYLRHGIVILDKNVNPTGVLEEASFYGIDSMIPALNN 541
Y +R P F ILNY R G + + EE SF+GI I A++N
Sbjct: 69 YTFERDPLMFRHILNYYRAGRLHYSCDYCADEFREELSFFGIS--INAVDN 117
>SB_37249| Best HMM Match : UDPGP (HMM E-Value=6.8e-18)
Length = 427
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 392 FIDRSPNYFEPILNYLR 442
FIDR P+ F PILN++R
Sbjct: 404 FIDRDPDAFVPILNFMR 420
>SB_21396| Best HMM Match : CHGN (HMM E-Value=3e-16)
Length = 519
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 79 LRLFTINECEINDVRVLR-DEESIYINLHEKNCD-KVEENVVNLCLEQKAKT 228
L+ F I E + +++R + S++ + HEK+CD ++ CL KAKT
Sbjct: 442 LQNFRITEVFFSYDKIIRAPDRSLFHHYHEKHCDPSLKWEQYRSCLGSKAKT 493
>SB_58498| Best HMM Match : Mtc (HMM E-Value=3.00004e-41)
Length = 217
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 437 LRHGIVILDKNVNPTGVLEEASFYGIDSMI 526
L HGIV+ DK+ N G ++A+ GI ++
Sbjct: 143 LAHGIVVFDKHGNAIGPSKKAAVKGISQVV 172
>SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 437 LRHGIVILDKNVNPTGVLEEASFYGIDSMI 526
L HGIV+ DK+ N G ++A+ GI ++
Sbjct: 403 LAHGIVVFDKHGNAIGPSKKAAVKGISQVV 432
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -1
Query: 143 LSSSL--NTRTSFISHSFIVNKRSISSGTWKSFDISFFNVTIES 18
LSSSL N + FI + S++ G W+ FD++ +N +ES
Sbjct: 297 LSSSLPQNQQQQFIMQNMESLIESMNKGNWQEFDLNQWNSLMES 340
>SB_31789| Best HMM Match : Ion_trans (HMM E-Value=6.3e-37)
Length = 583
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 374 DSSGAYFIDRSPNYFEPILNYLRHGIVILDKNVNP---TGVLEEASFYGI 514
D YF DR P F+ IL++ R G + N +P + +E +F+GI
Sbjct: 82 DDRKEYFFDRDPIMFKYILDFYRTGDFHI-SNKSPDCIEAISDELAFFGI 130
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Frame = +2
Query: 383 GAYFIDRSPNYFEPILNY------LRHGI-VILDKNVNP 478
GAY +D NY +P+ Y LR G V+LD ++NP
Sbjct: 938 GAYIVDALRNYEQPVFIYLLPNGELRGGAWVVLDPSINP 976
>SB_5106| Best HMM Match : F5_F8_type_C (HMM E-Value=3.6e-31)
Length = 445
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 238 WITLNVGGKHFTTSRSTLT-AKEPQSMLA 321
WI +N+G K+ T +R T K PQSM A
Sbjct: 352 WIMVNLGAKYHTGNRDQNTIIKNPQSMSA 380
>SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1214
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 436 VIQNRFKIIRTSVYKISATGICGTRIH*XTHYFHL 332
V +FK +RTS +K +A + TR++ YF +
Sbjct: 1058 VFGGKFKRVRTSTFKSNAIKVFPTRLYGYEKYFEM 1092
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +1
Query: 1 ARGAVEDSIVTLKKEISKLFQVPEEILRLFTINECEINDVRVLRDEESIYINLHEKNCDK 180
A+ A++++ L+K+ ++ F +E+L+ N I ++ LRD++ D
Sbjct: 407 AKAALKENKERLEKQTAE-FSEEKELLKTQVSNLEGI--LKNLRDDKERSEQHFVSELDS 463
Query: 181 VEENVVNLCLEQKAKTMTE 237
+ NLC+EQ AK E
Sbjct: 464 LRSRFDNLCMEQNAKRAIE 482
>SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21)
Length = 632
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 392 FIDRSPNYFEPILNYLRHG 448
F+D+ P FE + N+L HG
Sbjct: 431 FLDKYPGMFEVVANFLEHG 449
>SB_33226| Best HMM Match : ubiquitin (HMM E-Value=5.6)
Length = 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 19 DSIVTLKKEISKLFQVPEEILRLFTI--NECEINDVRVLRDEESIYIN 156
+++ LKK++ L + P E+ R++ + N EI + R L+D S +++
Sbjct: 40 ETLAGLKKKLEPLVECPSELFRIYRVYCNNQEIENTR-LQDTLSAFMD 86
>SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 990
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 473 NPTGVLEEASFYGIDSMIPALNNLIEESKSG 565
+P+G+ E S+Y +DS IP N E K+G
Sbjct: 727 SPSGI-ERRSWYELDSYIPLTENKTTEFKAG 756
>SB_1942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 451 YTVSQVIQNRFKIIRTSVYKISATGICGTRIH*XTHYFHLQTSWPA*IVVP 299
Y VS+V T VY ++ TR+H TH +H+ + +P +V P
Sbjct: 44 YPVSRVYPVTHVYPVTRVYPVTRVHPV-TRVHPVTHAYHITSVYPVTLVYP 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,818,949
Number of Sequences: 59808
Number of extensions: 309955
Number of successful extensions: 756
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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