Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F16
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      26   0.78 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.2  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   9.6  

>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 574 RDIQSLMKAFATVSALIS-SKAMTSGQRVN-RSTAVKQYLKPFEIGSGPIIS 425
           R I  L+  F  ++ L+  S  MT    ++  S A + +++PF++ S P+++
Sbjct: 2   RTIAQLVTLFGAIALLLLVSTEMTFANPLSPNSPAERPHIQPFQMASAPLVA 53


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 347 FKSYTPHEVASACIYTT 397
           F  Y P  +A ACIY T
Sbjct: 232 FVRYQPETIACACIYLT 248


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 141 RKKLYCDTSGTSPRLYLPSEFRRQAFDTIHGLN 239
           R K+Y +T  T+  +YL     +  F T  G+N
Sbjct: 393 RVKIYLETEHTNMNIYLVQNCCQLFFMTNFGIN 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,872
Number of Sequences: 2352
Number of extensions: 12375
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)