Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F16
(584 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 87 1e-17
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 87 1e-17
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 87 1e-17
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 83 2e-16
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 83 2e-16
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 83 2e-16
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 83 2e-16
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 81 8e-16
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 63 3e-10
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 61 9e-10
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 50 3e-06
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 42 5e-04
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 40 0.003
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 36 0.031
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 35 0.070
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 35 0.070
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 33 0.28
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 33 0.38
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 32 0.50
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 30 2.0
BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p pro... 29 3.5
AY069694-1|AAL39839.1| 843|Drosophila melanogaster LD46629p pro... 29 3.5
AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA... 29 3.5
AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC... 29 3.5
AE014298-970|AAO41636.1| 843|Drosophila melanogaster CG33691-PB... 29 3.5
AE014298-2161|AAF48463.1| 916|Drosophila melanogaster CG6324-PA... 29 4.6
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ... 28 8.1
AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p pro... 28 8.1
AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA... 28 8.1
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA... 28 8.1
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 87.4 bits (207), Expect = 1e-17
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ + Y W N+ K + + R C CQ++K T+HTK+P+ P
Sbjct: 903 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 961
Query: 399 TSRFSHVHVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
F V VD IGPLP S NG +Y +T + T++ I + + A+TVAKA +I +
Sbjct: 962 EHAFDRVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILK 1021
Query: 576 FG 581
+G
Sbjct: 1022 YG 1023
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 87.4 bits (207), Expect = 1e-17
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ + Y W N+ K + + R C CQ++K T+HTK+P+ P
Sbjct: 666 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 724
Query: 399 TSRFSHVHVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
F V VD IGPLP S NG +Y +T + T++ I + + A+TVAKA +I +
Sbjct: 725 EHAFDRVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILK 784
Query: 576 FG 581
+G
Sbjct: 785 YG 786
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 87.4 bits (207), Expect = 1e-17
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ + Y W N+ K + + R C CQ++K T+HTK+P+ P
Sbjct: 54 DPIQG-GHTGITKTLAKVKRHYYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETP 112
Query: 399 TSRFSHVHVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
F V VD IGPLP S NG +Y +T + T++ I + + A+TVAKA +I +
Sbjct: 113 EHAFDRVVVDTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILK 172
Query: 576 FG 581
+G
Sbjct: 173 YG 174
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 83.4 bits (197), Expect = 2e-16
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T I Y WP + K + +TC+ CQ++K+T HTK+P+ P
Sbjct: 661 DPIEG-GHTGISRTQSKIKRFYYWPQMTKTISKYVKTCLKCQQAKITTHTKTPLTLMPTP 719
Query: 399 TSRFSHVHVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
+ F V +D IGPLP S +G +Y +T + T++ I + A+TVAKA ++ +
Sbjct: 720 ATAFDTVLIDTIGPLPKSEDGNEYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLK 779
Query: 576 FG 581
+G
Sbjct: 780 YG 781
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 83.4 bits (197), Expect = 2e-16
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ I Y W N+ + + + R C CQ SK T HTK+P+ P
Sbjct: 36 DPIQG-GHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETP 94
Query: 399 TSRFSHVHVDIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
T+ F V VD +GPLP S G +Y +T + T++ I + + A TVAKA ++I +
Sbjct: 95 TNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILK 154
Query: 576 FG 581
+G
Sbjct: 155 YG 156
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 83.4 bits (197), Expect = 2e-16
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ I Y W N+ + + + R C CQ SK T HTK+P+ P
Sbjct: 492 DLIQG-GHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETP 550
Query: 399 TSRFSHVHVDIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
T+ F V VD +GPLP S G +Y +T + T++ I + + A TVAKA ++I +
Sbjct: 551 TNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILK 610
Query: 576 FG 581
+G
Sbjct: 611 YG 612
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 83.4 bits (197), Expect = 2e-16
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 DTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPP 398
D I G H G T+ I Y W N+ + + + R C CQ SK T HTK+P+ P
Sbjct: 492 DPIQG-GHTGITRTLAKIKRHYYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETP 550
Query: 399 TSRFSHVHVDIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISR 575
T+ F V VD +GPLP S G +Y +T + T++ I + + A TVAKA ++I +
Sbjct: 551 TNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILK 610
Query: 576 FG 581
+G
Sbjct: 611 YG 612
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 81.4 bits (192), Expect = 8e-16
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +3
Query: 240 HPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHV 419
H G T++ + WP + K + TC+ CQ+SK T+HTK+P+ P + F V
Sbjct: 296 HSGISRTLRKMKNCCCWPRMTKAISEYVETCLKCQQSKTTKHTKTPLTITETPATAFDIV 355
Query: 420 HVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFG 581
+D IGPLP S NG +Y +T + T++ + + + A++VAKA ++I ++G
Sbjct: 356 LIDTIGPLPRSENGNEYAVTIICDLTKYLVTVPIPNKSAKSVAKAVFENFILKYG 410
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +3
Query: 276 ARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS- 452
ARY WP + + R + R C C K ++ + P ++ V D +GPLP S
Sbjct: 118 ARYYWPGMHRGVRKYVRNCECCMMYKPSQLQAAGKMLTQVPEEPWATVCADFVGPLPRSK 177
Query: 453 NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFG 581
+G L VDRF++W E++ + ET+ KA ++R+G
Sbjct: 178 HGNSMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYG 220
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 61.3 bits (142), Expect = 9e-10
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Frame = +3
Query: 72 ELQQLVENNSSSLKLQLLHFSDFRKKLYCDTSGTSPRLYLPSEFRRQAFDTIHG-LNHPG 248
E++QL+EN + L + +Y T+ Y+P E Q H L H G
Sbjct: 1160 EIRQLLENTENKL------YEMRNGIVYKKTNENRLLFYVPIEMEEQVLYKYHNELGHVG 1213
Query: 249 AKTTIKLITARYVWPNIRKDCRLWTRTCVDC-QRSKVTRHTKSPVHAFTPPTSRFSHVHV 425
I+ I Y +PN+++ C C+ C S T T+ +H F +H+
Sbjct: 1214 RDKMIEAIMKNYWFPNLKQKCSTHISNCLKCISFSPKTGKTEGFLHNIPKGNKPFEIIHI 1273
Query: 426 DIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKA 551
D GP+ ++ K+ L VD FT++ + A + + V ++
Sbjct: 1274 DHYGPVDLARPKKHILVIVDAFTKFVRLYATKTTNTKEVIQS 1315
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 204 RRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVH 383
+R+ H H A+ +K I Y +P + + + C+ CQ++K RH + +
Sbjct: 744 QREIVSLEHNRAHRAAQENVKQILQYYFFPKMSQIAATFVSNCLVCQKAKYDRHPQKQIL 803
Query: 384 AFTP-PTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRW 500
TP P+ +H+DI S G Y LT +D+F+++
Sbjct: 804 GRTPIPSHVGETLHIDI-----FSTGRNYFLTCIDKFSKF 838
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 42.3 bits (95), Expect = 5e-04
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Frame = +3
Query: 9 VESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQLLHFSDFR-KKLYCDTSGTSPRL 185
V+ + T+ N+I +D+ L+E S+ HF R K L + G +
Sbjct: 800 VKILKGTLKPNRICAFLADDNN-SALIEKAFSTYFAHKKHFKIIRCKSLLHEIVGNPEQN 858
Query: 186 YLPSEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRH 365
E+ + NH G T + +PN++ R C C + K R
Sbjct: 859 KFIQEYHTNS-------NHRGIDETFLHLKRETYFPNMKNKISELIRNCETCLKLKYDRQ 911
Query: 366 TKSPVHAFTP--PTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAET 539
++ V TP P+ +H+DI I+N F LT +D+F+++ V + +
Sbjct: 912 PQNIVFE-TPETPSKPLDIIHIDI---YTINNNFN--LTIIDKFSKFAAVYPIPNRNGIN 965
Query: 540 VAKAFIRDWISRFG 581
KA I+++ S+FG
Sbjct: 966 CIKA-IKNFFSQFG 978
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +3
Query: 177 PRLYLPSEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKV 356
P + +E + D + NH G T I + +P++++ R C C + K
Sbjct: 738 PEITDSTEIEKIITDYHYNSNHRGIDETYLHIKRQQFFPHMKERITQLIRKCETCLKLKY 797
Query: 357 TRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA 533
R + + + P+ +H+DI + Y LT +D+F+++ + +
Sbjct: 798 DRQPQKITYQISELPSKPLDILHIDI-----YTINKNYNLTIIDKFSKFAAAYPITNRNC 852
Query: 534 ETVAKAFIRDWISRFG 581
V KA ++ +IS+FG
Sbjct: 853 INVVKA-LKHFISQFG 867
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 36.3 bits (80), Expect = 0.031
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 195 SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVT-RHTK 371
+ F+ +T L HPG + T+KL + Y +PN + + C C +K R+T+
Sbjct: 711 ASFKELILNTHEKLLHPGIQKTVKLFSENYYFPNSQLLIQNIINECQVCNLAKTEHRNTE 770
Query: 372 SPVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAE 536
P+ P +DI S G Y L+ +D ++++ LE IK +
Sbjct: 771 MPMKITPKPEHCRDKFVIDIYS----SEGNHY-LSCIDIYSKF---ATLEQIKTK 817
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 35.1 bits (77), Expect = 0.070
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +3
Query: 228 HGLNHPGAKTTIKL-ITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PT 401
H H G T I+L + +Y +P + RL T +C C+ K RH P TP P
Sbjct: 701 HRRAHRGP-TEIRLQLLEKYYFPRMSSTIRLQTSSCQCCKLYKYERHPNKPNLQPTPIPN 759
Query: 402 SRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALE 521
+H+DI + + L+ +D+F+++ ++ L+
Sbjct: 760 YPCEILHIDI-----FALEKRLYLSCIDKFSKFAKLFHLQ 794
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 35.1 bits (77), Expect = 0.070
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = +3
Query: 117 QLLHFSDFRKKLYCDTSGTSPRLYLPSEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPN 296
+++ ++F K L C T Y +EF+ L HPG + TI L Y +P+
Sbjct: 804 EIISPNNFTKLLRCTTKLIDILTY--AEFKDLILKKHKELLHPGIEKTINLFKEEYYYPD 861
Query: 297 IRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP 395
+K + C C +K T H + TP
Sbjct: 862 SQKLIQTIINECQICYLAK-TEHQTQMTYETTP 893
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 195 SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVT-RHTK 371
+EF+ + L HPG + T KL + Y +PN + + C C +K R+TK
Sbjct: 695 AEFKELILQSHEKLLHPGIQKTKKLFSENYFFPNSQLQIQNIINECQVCNLAKSEHRNTK 754
Query: 372 SP 377
P
Sbjct: 755 VP 756
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 32.7 bits (71), Expect = 0.38
Identities = 28/114 (24%), Positives = 50/114 (43%)
Frame = +3
Query: 195 SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKS 374
+EF+ L HPG + T KL Y +PN + + C C +K T H +
Sbjct: 748 AEFKELILTAHEKLLHPGIQKTTKLFGETYYFPNSQLLIQNIINECSICNLAK-TEHRNT 806
Query: 375 PVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAE 536
+ T P + H + + S G K+ ++ +D ++++ LE+IK +
Sbjct: 807 DMPTKTTP--KPEHCREKFMIDIYSSEG-KHYVSCIDIYSKF---ATLEEIKTK 854
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1065
Score = 32.3 bits (70), Expect = 0.50
Identities = 26/106 (24%), Positives = 45/106 (42%)
Frame = +3
Query: 195 SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKS 374
SEF+ + L HPG + L +Y +P+ +K + C C SK
Sbjct: 748 SEFKEIIIKSHRELLHPGIEKQTNLFKEKYYYPDYQKLIQNIINECEVCNISKTEHRDTK 807
Query: 375 PVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVI 512
+ TP T F+ +I I+N K L+ +D ++++ +I
Sbjct: 808 LRYELTPET--FNPREKYVIDFYLINN--KTFLSCIDIYSKYAALI 849
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 195 SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCQRSKVT-RHTK 371
+EF+ + L HPG + KL + +PN + + C C +K R+TK
Sbjct: 748 AEFKEIILQSHEKLLHPGIQKMTKLFKENHFFPNSQLLIQNIINECNICNLAKTEHRNTK 807
Query: 372 SPVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAE 536
P+ P H + + S G K+ ++ +D ++++ LE IK +
Sbjct: 808 MPLKITPNP----EHCREKFVVDIYSSEG-KHYISCIDIYSKF---ATLEQIKTK 854
>BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p
protein.
Length = 758
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -3
Query: 204 ETLKVSINEETYQMCHNIISS*SQKNVITVISVKKNCFQQVVVAHCRFLVQCV 46
+ LKV +++ C N+ + + ++T+I +KN F V + HC+ L++ +
Sbjct: 648 KVLKVCVDKHLVP-CINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEAL 699
>AY069694-1|AAL39839.1| 843|Drosophila melanogaster LD46629p
protein.
Length = 843
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -3
Query: 204 ETLKVSINEETYQMCHNIISS*SQKNVITVISVKKNCFQQVVVAHCRFLVQCV 46
+ LKV +++ C N+ + + ++T+I +KN F V + HC+ L++ +
Sbjct: 733 KVLKVCVDKHLVP-CINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEAL 784
>AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA,
isoform A protein.
Length = 758
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -3
Query: 204 ETLKVSINEETYQMCHNIISS*SQKNVITVISVKKNCFQQVVVAHCRFLVQCV 46
+ LKV +++ C N+ + + ++T+I +KN F V + HC+ L++ +
Sbjct: 648 KVLKVCVDKHLVP-CINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEAL 699
>AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC,
isoform C protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -3
Query: 204 ETLKVSINEETYQMCHNIISS*SQKNVITVISVKKNCFQQVVVAHCRFLVQCV 46
+ LKV +++ C N+ + + ++T+I +KN F V + HC+ L++ +
Sbjct: 592 KVLKVCVDKHLVP-CINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEAL 643
>AE014298-970|AAO41636.1| 843|Drosophila melanogaster CG33691-PB,
isoform B protein.
Length = 843
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -3
Query: 204 ETLKVSINEETYQMCHNIISS*SQKNVITVISVKKNCFQQVVVAHCRFLVQCV 46
+ LKV +++ C N+ + + ++T+I +KN F V + HC+ L++ +
Sbjct: 733 KVLKVCVDKHLVP-CINMKAYNESEQLMTLIEFQKNFFPSVPLDHCKRLIEAL 784
>AE014298-2161|AAF48463.1| 916|Drosophila melanogaster CG6324-PA
protein.
Length = 916
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 6 RVESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQLLHFSDFRKK 149
++ INK +N+IH Q+N E QQ + + Q F+++
Sbjct: 757 QIHHINKINQINQIHRIQQNQQEPQQFQQPQEIQQRQQFQQPQQFQQR 804
>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
homolog protein.
Length = 1487
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 9 VESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQL 122
V+ KTM N+ T Q+ DS LV NN +S+ L
Sbjct: 231 VKKPEKTMWQNETKTIQDKDSPANPLVSNNLASISTLL 268
>AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p
protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 294 NIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCL 473
N + +C +W+ T D + S + + K P H+ +FS D L S C+
Sbjct: 184 NNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFS---PDSRLLLTTSGDGTVCI 240
Query: 474 TAVDRFTRWPEV 509
D F++W E+
Sbjct: 241 WKTDDFSKWREL 252
>AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA
protein.
Length = 313
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 294 NIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISNGFKYCL 473
N + +C +W+ T D + S + + K P H+ +FS D L S C+
Sbjct: 184 NNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFS---PDSRLLLTTSGDGTVCI 240
Query: 474 TAVDRFTRWPEV 509
D F++W E+
Sbjct: 241 WKTDDFSKWREL 252
>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
protein.
Length = 1487
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 9 VESINKTMDLNKIHTAQENDSELQQLVENNSSSLKLQL 122
V+ KTM N+ T Q+ DS LV NN +S+ L
Sbjct: 231 VKKPEKTMWQNETKTIQDKDSPANPLVSNNLASISTLL 268
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,457,464
Number of Sequences: 53049
Number of extensions: 506088
Number of successful extensions: 1481
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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