Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F15
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 374 e-103
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 374 e-103
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 374 e-103
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 374 e-103
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 373 e-103
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 373 e-103
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 372 e-103
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 372 e-103
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 372 e-103
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 228 1e-59
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 7e-59
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 211 1e-54
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 169 5e-42
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 147 3e-35
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 32 1.4
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 32 1.4
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 32 1.4
U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream bi... 32 1.4
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 32 1.4
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 374 bits (921), Expect = e-103
Identities = 182/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 373 bits (918), Expect = e-103
Identities = 181/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 373 bits (917), Expect = e-103
Identities = 181/203 (89%), Positives = 190/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 372 bits (916), Expect = e-103
Identities = 181/203 (89%), Positives = 189/203 (93%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 368
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACY 120
Query: 369 GVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 548
GVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 549 VLGIKVKIMLPWDQQGKNGPKKP 617
VLGIKVKIMLPWD GK GPKKP
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKP 203
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 372 bits (916), Expect = e-103
Identities = 181/202 (89%), Positives = 189/202 (93%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
A ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 192 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 371
KGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 372 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 551
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 121 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 180
Query: 552 LGIKVKIMLPWDQQGKNGPKKP 617
LGIKVKIMLPWD GK GPKKP
Sbjct: 181 LGIKVKIMLPWDPTGKIGPKKP 202
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 372 bits (916), Expect = e-103
Identities = 181/202 (89%), Positives = 189/202 (93%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
A ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 192 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 371
KGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 372 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 551
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 121 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 180
Query: 552 LGIKVKIMLPWDQQGKNGPKKP 617
LGIKVKIMLPWD GK GPKKP
Sbjct: 181 LGIKVKIMLPWDPTGKIGPKKP 202
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 228 bits (558), Expect = 1e-59
Identities = 109/118 (92%), Positives = 112/118 (94%)
Frame = +3
Query: 264 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 443
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 444 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKP 617
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKP 118
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 7e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +3
Query: 192 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 371
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 372 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 551
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 552 LGIKVKI 572
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 211 bits (516), Expect = 1e-54
Identities = 104/117 (88%), Positives = 110/117 (94%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 359
EKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 169 bits (412), Expect = 5e-42
Identities = 83/95 (87%), Positives = 88/95 (92%)
Frame = +3
Query: 9 MATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLG 188
MA ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 189 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 293
EKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 147 bits (356), Expect = 3e-35
Identities = 69/77 (89%), Positives = 71/77 (92%)
Frame = +3
Query: 387 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 566
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 567 KIMLPWDQQGKNGPKKP 617
KIMLPWD GK GPKKP
Sbjct: 61 KIMLPWDPTGKIGPKKP 77
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 517 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 573
Query: 192 KGRRIRELTSVVQKRFNI 245
+ ++L QK++ +
Sbjct: 574 QKEHYKKLAEEQQKQYKV 591
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 554 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 610
Query: 192 KGRRIRELTSVVQKRFNI 245
+ ++L QK++ +
Sbjct: 611 QKEHYKKLAEEQQKQYKV 628
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 554 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 610
Query: 192 KGRRIRELTSVVQKRFNI 245
+ ++L QK++ +
Sbjct: 611 QKEHYKKLAEEQQKQYKV 628
>U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream
binding transcription factor protein.
Length = 654
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 396 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 452
Query: 192 KGRRIRELTSVVQKRFNI 245
+ ++L QK++ +
Sbjct: 453 QKEHYKKLAEEQQKQYKV 470
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 32.3 bits (70), Expect = 1.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 12 ATNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 191
ATN SKK KF G+ K +N + ++ +++ S E+ P++ ++ + +R Q +
Sbjct: 517 ATNSSKKMKFQGEPK-KPPMNGY--QKFSQELLSNGELNHLPLKERMVEIGSRWQRISQS 573
Query: 192 KGRRIRELTSVVQKRFNI 245
+ ++L QK++ +
Sbjct: 574 QKEHYKKLAEEQQKQYKV 591
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,180,378
Number of Sequences: 237096
Number of extensions: 1839624
Number of successful extensions: 3587
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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