Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F14
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 32 0.34
04_04_0289 + 24167246-24167411,24167584-24167708,24167744-241686... 31 0.45
01_06_1518 + 37925609-37925871,37925954-37926554 31 0.79
11_06_0686 + 26280772-26281611 30 1.0
02_02_0675 + 12845980-12846111,12846211-12846363,12846954-128471... 30 1.0
04_01_0226 + 2842897-2842921,2843049-2843155,2843426-2843494,285... 30 1.4
03_02_0992 + 13049871-13050449 30 1.4
02_01_0017 - 112766-113650 30 1.4
08_02_0849 - 21841470-21841883,21843748-21843813,21844768-218449... 29 1.8
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 29 1.8
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 29 1.8
07_03_0799 - 21587003-21587040,21588262-21588658 29 2.4
03_05_1160 + 30826972-30828375,30828641-30828754,30828901-308290... 29 2.4
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 29 2.4
08_02_0955 + 22994266-22995630 29 3.2
02_04_0103 - 19768288-19768737 29 3.2
01_06_1570 + 38312319-38314259 29 3.2
07_01_0230 - 1679165-1681108 28 4.2
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 4.2
05_01_0189 + 1361743-1361934,1362454-1362623,1362966-1363500,136... 28 4.2
03_05_0038 + 20121924-20122080,20123182-20123843 28 4.2
06_01_0488 + 3467962-3468018,3468366-3468788 28 5.5
02_01_0194 + 1314181-1314661,1315656-1315723,1315834-1315965,131... 27 7.3
12_02_1209 - 27019724-27020040,27020690-27020945 27 9.7
07_03_0173 - 14721369-14721503,14722542-14722629,14723580-147237... 27 9.7
06_03_0016 - 15444543-15444901,15445091-15445113,15445205-154456... 27 9.7
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 27 9.7
03_05_0590 - 25922905-25923008,25923637-25924594 27 9.7
03_04_0152 + 17740643-17741407 27 9.7
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 9.7
01_06_0087 + 26299692-26299971,26301721-26301933,26302027-263024... 27 9.7
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 439 RHKPHHDVARSATTDPP--SAAITCTSLSDSSQKCGHGNAGGYTQRESCT 296
RHKP H A PP ++ ++CT S SS + G + SCT
Sbjct: 47 RHKPRHYTVAQAVHHPPWATSGVSCTISSGSSATSSCTISSGSSATSSCT 96
>04_04_0289 +
24167246-24167411,24167584-24167708,24167744-24168694,
24168788-24168940,24169251-24169475,24170102-24170587
Length = 701
Score = 31.5 bits (68), Expect = 0.45
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -2
Query: 436 HKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCLEPCGGRQP 257
H + R ATT PP + L SS + G A G + RT +E CG
Sbjct: 535 HDDRCEATREATTRPP-PLLAAAGLLASSAQADRGPAQGGDGNDHQIRTAPIESCGAAAG 593
Query: 256 HHLQGDGD 233
GDGD
Sbjct: 594 ---DGDGD 598
>01_06_1518 + 37925609-37925871,37925954-37926554
Length = 287
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 487 ASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQR 308
AS+ A S++ AP +H+ H+ V +A PS A S + + GH ++GG +
Sbjct: 145 ASTAAFPSLAPAPPPQQHRLHNPVHAAA----PSNASFARSAASPPSEDGHSSSGGSSDA 200
Query: 307 ESC 299
C
Sbjct: 201 PRC 203
>11_06_0686 + 26280772-26281611
Length = 279
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 189 HICRCGAAGGSHSAWSPSPCKW 254
H C C A G +SPS C+W
Sbjct: 235 HYCHCAAGDGHGHYYSPSSCQW 256
>02_02_0675 +
12845980-12846111,12846211-12846363,12846954-12847100,
12847372-12847656
Length = 238
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 490 LASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTS 365
+A++C+ RSV++AP R V +T PPS + +S
Sbjct: 1 MAAACSFRSVARAPPPLRGLARRGVVHCCSTAPPSGGTSTSS 42
>04_01_0226 +
2842897-2842921,2843049-2843155,2843426-2843494,
2850676-2852745
Length = 756
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 70 VNIWL--CLRAKCPIQCVTFVLIFLHIGREQSRGEQYV--SASFISVGAARLVGRTRL 231
V+ W+ C+RA P T L+F G E G+ V + +++ +G A L+ T L
Sbjct: 308 VHTWIGYCIRALSPFAIATSFLLFYFCGSEVKDGQNGVDTAVTYVLLGGALLMETTSL 365
>03_02_0992 + 13049871-13050449
Length = 192
Score = 29.9 bits (64), Expect = 1.4
Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Frame = -2
Query: 529 RSYACSAPRSRLILASSCARRSVSQAPSRARHK-PHHDVARS-ATTDPPSAAITCTSLSD 356
RS P L LA S R P R R P + R A+T PP A T T L
Sbjct: 54 RSLPPPPPSPLLALAGSRIGRGGVLPPHRHRRSVPPPSLGRGVASTSPPLHAATVTPLRP 113
Query: 355 SSQKCGHGNAGGYTQ--RESCTRTVCLEPCGGRQPHHLQGDGDQAECDPPAAPHR 197
+ + G G + + + R VC PH + G++ C + HR
Sbjct: 114 AGSRSGEGGSSRHCRFLHRRHRRRVCATTVA--PPHPARERGNRL-CTTSTSHHR 165
>02_01_0017 - 112766-113650
Length = 294
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 493 ILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAA 380
IL SS +S SQ+P+R P + TT+PP AA
Sbjct: 43 ILVSSAQSQSQSQSPTRIPPPPTPPPRPTTTTNPPCAA 80
>08_02_0849 -
21841470-21841883,21843748-21843813,21844768-21844951,
21845427-21847468,21848544-21848870
Length = 1010
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 198 RCGAAGGSHSAWSPSPCKWCGC 263
RCGAAGG + C +CGC
Sbjct: 58 RCGAAGGLLRGEGSAVCAYCGC 79
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 201 CGAAGGSHSAWSPSPCKWCGCRP 269
CG+ +H AWSPS W RP
Sbjct: 425 CGSRVAAHRAWSPSVGDWLADRP 447
>03_05_0890 - 28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 267 PPHGSRHTVRVQDSRCVYPPALPWPHFCEESDSEVQ 374
PP + H + D+ + +PWPH EE SE Q
Sbjct: 1139 PPFNAEHPQTIFDN--ILNRKIPWPHVPEEMSSEAQ 1172
>07_03_0799 - 21587003-21587040,21588262-21588658
Length = 144
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 152 SRAGVSSMYPRRSYLSVRRGWWVALGLVAVTLQVV 256
S+A M + SY+S WW + G +AV QVV
Sbjct: 97 SKASQRGMPVQGSYMSAELVWWWSFGALAVDSQVV 131
>03_05_1160 +
30826972-30828375,30828641-30828754,30828901-30829032,
30830087-30830224
Length = 595
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Frame = -2
Query: 421 DVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCLEP---CGGRQPHH 251
DV + S A S+ D+ C GNA + E C T ++P C H
Sbjct: 198 DVLKKGGPISTSGANAKPSVPDAHD-CSKGNASNANEAEDCNATSRIDPDPACNDEATHS 256
Query: 250 LQGDGDQAECDPPAAPH 200
G + + +PH
Sbjct: 257 QNGSVPEKTAERSQSPH 273
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/85 (25%), Positives = 32/85 (37%)
Frame = -2
Query: 481 SCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRES 302
SC +R R + ++ + PPS T S++ S C H A T +
Sbjct: 256 SCRKRLTEHNRRRRKPTAGGQSSKDSPPPPPSKKGTDASIASSYTSCDHHKAAAST--TT 313
Query: 301 CTRTVCLEPCGGRQPHHLQGDGDQA 227
+ CL+ HH G G QA
Sbjct: 314 ASGVSCLQELA---DHHDVGGGHQA 335
>08_02_0955 + 22994266-22995630
Length = 454
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 466 SVSQAPSRARHK-PHHDVARSATTDPPSAAITCTSLSDS 353
S S +PSR+R K P H+ A ++T P SAA+ + SDS
Sbjct: 37 SRSASPSRSRSKTPPHNAAVLSST-PASAAVDFVAASDS 74
>02_04_0103 - 19768288-19768737
Length = 149
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 514 SAPRSRLILASSCARRSVSQAPSRARHKPHHDVARSATTDP 392
+APRSR+ S C RR S P DVA +AT +P
Sbjct: 49 AAPRSRM---SRCRRREPSPPPLPPTWHAREDVAAAATWEP 86
>01_06_1570 + 38312319-38314259
Length = 646
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 339 PHFCEESDSEVQVIAAEGGSVVAERATSWCGLWRALLGACETDLRAQLDA 488
P +C + Q +A G + V S CG A L C + L A +DA
Sbjct: 131 PSYCAGVTTAKQYVATVGNAAVLGSLNSSCGSDLADLSLCSSCLAAAIDA 180
>07_01_0230 - 1679165-1681108
Length = 647
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +2
Query: 146 GVSRAGVSSMYPRRSYLSVRRGWWVALGLVAVTLQVVRLPASARLEAHCSRAGLPLRVPA 325
GVS G SS L+ GW + A T+ +++LP R L + +P
Sbjct: 216 GVSYIGFSSGANNVGALNYVLGWSFGMNSPAPTIDIIKLPKLPRFGPKVRSKTLKIVLPI 275
Query: 326 CVTVATFL 349
+T L
Sbjct: 276 VITTVILL 283
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 327 QAGTRSGSPAREQCASSRAEAGSRTTCKVTATKPSA 220
Q T S S A+E+ A+ R + S + VTA++PS+
Sbjct: 872 QTSTTSNSEAQEETAAIRVASPSVSEVTVTASRPSS 907
>05_01_0189 +
1361743-1361934,1362454-1362623,1362966-1363500,
1365170-1365199
Length = 308
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 152 SRAGVSSMYPRRSYLSVRRGWWVALGLVAVTLQVV 256
S+AG M + SY WW +G AV LQV+
Sbjct: 266 SKAGRREMPVQGSYRLAELVWWWGIGASAVDLQVI 300
>03_05_0038 + 20121924-20122080,20123182-20123843
Length = 272
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +3
Query: 174 CIRVV----HICRCGAAGGSHSAWSPSPCKWCGCRPPHGS 281
C RVV H+ R G H W P P + C C GS
Sbjct: 204 CSRVVDPPLHMWRGGGRVAQHQEWRPRPRRRCECLEEGGS 243
>06_01_0488 + 3467962-3468018,3468366-3468788
Length = 159
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 466 SVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKC 341
+V PS + +P H A +A PP+AA+ T ++C
Sbjct: 119 AVVVGPSSCKQRPRHR-ALAAAPLPPNAAVASTEKKKGGERC 159
>02_01_0194 +
1314181-1314661,1315656-1315723,1315834-1315965,
1317581-1317742,1318288-1318611
Length = 388
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 339 ATVTQAGTRSGSPAREQCASSRAEAGSRTTCKVTATKPSATHQP 208
AT T A + + + A + A + AEA S T A +AT+QP
Sbjct: 4 ATETTATSPAAAAAAQPEAEAEAEAESAATPVAVAAAAAATYQP 47
>12_02_1209 - 27019724-27020040,27020690-27020945
Length = 190
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2
Query: 502 SRLILASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAA 380
+RL A++ ARR A SRA VARSA SAA
Sbjct: 16 ARLAAAAAAARRDDEGASSRAASLAASRVARSARAAAASAA 56
>07_03_0173 -
14721369-14721503,14722542-14722629,14723580-14723752,
14727237-14727902
Length = 353
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -2
Query: 454 APSRARHKPHHDVARSATTDPPSAAIT---CTSLSDSSQKCGHGNA 326
A +R PH AR++T P+AA T D S GH +A
Sbjct: 2 AGARPFFSPHEAFARASTASSPAAAATVAVAAPAPDPSPATGHADA 47
>06_03_0016 -
15444543-15444901,15445091-15445113,15445205-15445618,
15445707-15445726
Length = 271
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 309 GSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDR 193
GSP Q + A SR AT A+H P RT +
Sbjct: 96 GSPGTPQATTRTATTASRAAKAEDATAKVASHGPTRTPK 134
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 189 HICRCGAAGGSHSAWSPSPCKWCGCRPP 272
H C CG A A +P P ++ C PP
Sbjct: 276 HCCSCGKAPEPAPAPAPPPPQYIPCYPP 303
>03_05_0590 - 25922905-25923008,25923637-25924594
Length = 353
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 472 RRSVSQAPSRARHKPHHDVARSATTDP 392
RR+ APS ARH+P A +A P
Sbjct: 172 RRNKDSAPSSARHEPSSAAAAAAMAKP 198
>03_04_0152 + 17740643-17741407
Length = 254
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 168 AVCIRVVHICRCGAAGGSHSAWSPSPCKWCG 260
A+C+ VV C AAGG+ + WSP+ + G
Sbjct: 8 ALCLAVVAAC---AAGGAVADWSPATATFYG 35
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 508 PRSRLILASSCARRSVSQAPSRARHKP 428
P + +SS AR++ Q P R RH+P
Sbjct: 40 PSKNVSTSSSQARKTTVQKPKRKRHRP 66
>01_06_0087 +
26299692-26299971,26301721-26301933,26302027-26302464,
26304500-26304708
Length = 379
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 128 KTKVTHWIGHFARKHNQIFTYRVDEMK 48
+T W FA HN++ T R+D+++
Sbjct: 257 RTGCLAWFNKFAEFHNRVLTARLDDLR 283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,163,878
Number of Sequences: 37544
Number of extensions: 331307
Number of successful extensions: 1610
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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