Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F14
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 35 0.16
Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associa... 33 0.85
AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein S... 33 0.85
AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction assoc... 33 0.85
AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction assoc... 33 0.85
AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein. 33 0.85
Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA seque... 31 2.6
AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein pro... 31 2.6
AL390252-5|CAI13174.1| 248|Homo sapiens differential display an... 31 2.6
AL390252-3|CAI13172.1| 310|Homo sapiens differential display an... 31 2.6
AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA seq... 31 2.6
AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA seq... 31 2.6
AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA seq... 31 2.6
AK126567-1|BAC86599.1| 310|Homo sapiens protein ( Homo sapiens ... 31 2.6
AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain prot... 31 2.6
AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain prot... 31 2.6
AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein. 31 2.6
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 31 3.4
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 31 3.4
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 31 3.4
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 31 3.4
AB208863-1|BAD92100.1| 251|Homo sapiens protocadherin alpha 5 i... 31 3.4
U06233-1|AAA16509.1| 410|Homo sapiens Brn-3b protein. 30 4.6
BC080577-1|AAH80577.1| 126|Homo sapiens MLLT10 protein protein. 30 4.6
AL358780-5|CAI13982.1| 126|Homo sapiens myeloid/lymphoid or mix... 30 4.6
BC050291-1|AAH50291.1| 547|Homo sapiens glucocorticoid induced ... 30 6.0
U28049-1|AAA73861.1| 702|Homo sapiens TBX2 protein. 29 8.0
BC052566-1|AAH52566.1| 702|Homo sapiens T-box 2 protein. 29 8.0
BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like... 29 8.0
AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like... 29 8.0
AK097864-1|BAC05188.1| 193|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK094362-1|BAC04338.1| 576|Homo sapiens protein ( Homo sapiens ... 29 8.0
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 35.1 bits (77), Expect = 0.16
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 174 CIRVVHICRCGAAGGSHSAWSP-SPCKWCGCRPPHGSRHTVRVQDSRC 314
C +H R G+ G S S+ P S C+WC C H S H + C
Sbjct: 96 CCSSLHSSR-GSRGSSWSSSPPGSTCRWCSCHSHHHSHHRSHHRSHHC 142
>Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associated
protein 1 protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.85
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 448 SRARHKPHHDVA----RSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCL 281
+R H+P A ++ PP+AA + SL+ SS AGG ++++ R
Sbjct: 98 ARRAHRPRDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLR---- 153
Query: 280 EPCGGRQPHHLQGDG 236
R HLQGDG
Sbjct: 154 -----RGKRHLQGDG 163
>AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein
SHREW1 protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.85
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 448 SRARHKPHHDVA----RSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCL 281
+R H+P A ++ PP+AA + SL+ SS AGG ++++ R
Sbjct: 98 ARRAHRPRDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLR---- 153
Query: 280 EPCGGRQPHHLQGDG 236
R HLQGDG
Sbjct: 154 -----RGKRHLQGDG 163
>AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.85
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 448 SRARHKPHHDVA----RSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCL 281
+R H+P A ++ PP+AA + SL+ SS AGG ++++ R
Sbjct: 98 ARRAHRPRDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLR---- 153
Query: 280 EPCGGRQPHHLQGDG 236
R HLQGDG
Sbjct: 154 -----RGKRHLQGDG 163
>AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.85
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 448 SRARHKPHHDVA----RSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCL 281
+R H+P A ++ PP+AA + SL+ SS AGG ++++ R
Sbjct: 98 ARRAHRPRDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLR---- 153
Query: 280 EPCGGRQPHHLQGDG 236
R HLQGDG
Sbjct: 154 -----RGKRHLQGDG 163
>AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.85
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -2
Query: 448 SRARHKPHHDVA----RSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRESCTRTVCL 281
+R H+P A ++ PP+AA + SL+ SS AGG ++++ R
Sbjct: 98 ARRAHRPRDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLR---- 153
Query: 280 EPCGGRQPHHLQGDG 236
R HLQGDG
Sbjct: 154 -----RGKRHLQGDG 163
>Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA sequence
from clone CTA-125H2 on chromosome 22q11-12. ).
Length = 2566
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AY077700-1|AAL75811.1| 2568|Homo sapiens myosin-like protein
protein.
Length = 2568
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AL390252-5|CAI13174.1| 248|Homo sapiens differential display and
activated by p53 (DDA3) protein.
Length = 248
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 318 TRSGSPAREQCA-SSRAEAGSRT-TCKVTATKPSATHQP 208
TRS P R + S RA A T K+ A +P+ATHQP
Sbjct: 193 TRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQP 231
>AL390252-3|CAI13172.1| 310|Homo sapiens differential display and
activated by p53 (DDA3) protein.
Length = 310
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 318 TRSGSPAREQCA-SSRAEAGSRT-TCKVTATKPSATHQP 208
TRS P R + S RA A T K+ A +P+ATHQP
Sbjct: 193 TRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQP 231
>AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone RP11-89B2 on chromosome 22. ).
Length = 2566
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone CTA-109D1 on chromosome 22. ).
Length = 2566
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA
sequence from clone CTA-407F11 on chromosome 22q12. ).
Length = 2566
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AK126567-1|BAC86599.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ44604 fis, clone BRACE2002392, moderately
similar to Mus musculus differential display and
activated by p53 ).
Length = 310
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 318 TRSGSPAREQCA-SSRAEAGSRT-TCKVTATKPSATHQP 208
TRS P R + S RA A T K+ A +P+ATHQP
Sbjct: 193 TRSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQP 231
>AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain
protein.
Length = 2567
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AJ310931-1|CAC70712.2| 2567|Homo sapiens myosin heavy chain
protein.
Length = 2567
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein.
Length = 2567
Score = 31.1 bits (67), Expect = 2.6
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = -3
Query: 312 SGSPAREQCASSRAEAGSRTTCKVTATKPSATHQPRRTDRYERRGYILLTPALLTPDVQK 133
S SP EQ S E T TK + + R RRG +LL A L PD K
Sbjct: 112 SRSPDPEQMTSINGEKAQELGSSATPTKKTVPFK-----RGVRRGDVLLMVAKLDPDSAK 166
Query: 132 YQDKSHTLDRTLCT*TQP 79
+K+H D C + P
Sbjct: 167 -PEKTHPHDAPPCKTSPP 183
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 54 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 227
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 54 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 227
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 54 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 227
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 54 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 227
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 692 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 748
>AB208863-1|BAD92100.1| 251|Homo sapiens protocadherin alpha 5
isoform 1 precursor variant protein.
Length = 251
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 54 LIDSISKYLVVFTCKVSDPVCDFCLDISAHRA*AEPG*AVCIRVVHICRCGAAGGSHS 227
L+D ++ YL++ C VS + L +A R A+P AVC R C +A GS S
Sbjct: 7 LVD-VNVYLIIAICAVSSLLVLTLLLYTALRCSAQPTEAVCTRGKPTLLCSSAVGSWS 63
>U06233-1|AAA16509.1| 410|Homo sapiens Brn-3b protein.
Length = 410
Score = 30.3 bits (65), Expect = 4.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 463 VSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSS 350
VSQ+ S H PHH + T I CTS + SS
Sbjct: 121 VSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSS 158
>BC080577-1|AAH80577.1| 126|Homo sapiens MLLT10 protein protein.
Length = 126
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +3
Query: 231 WSPSPCKWCGCRPPHGSRHTVRVQDSRCVYPPALPWPHFCEESDSEVQVIAAEGGSVVAE 410
W+ +P +C HG V V P PW FC + +S+ + VA+
Sbjct: 34 WAENPLVYCD---GHGCSVAVHQACYGIVQVPTGPW--FCRKCESQERAARVAESRSVAQ 88
Query: 411 RATSWCGL 434
WC L
Sbjct: 89 AKVQWCDL 96
>AL358780-5|CAI13982.1| 126|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 126
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +3
Query: 231 WSPSPCKWCGCRPPHGSRHTVRVQDSRCVYPPALPWPHFCEESDSEVQVIAAEGGSVVAE 410
W+ +P +C HG V V P PW FC + +S+ + VA+
Sbjct: 34 WAENPLVYCD---GHGCSVAVHQACYGIVQVPTGPW--FCRKCESQERAARVAESRSVAQ 88
Query: 411 RATSWCGL 434
WC L
Sbjct: 89 AKVQWCDL 96
>BC050291-1|AAH50291.1| 547|Homo sapiens glucocorticoid induced
transcript 1 protein.
Length = 547
Score = 29.9 bits (64), Expect = 6.0
Identities = 25/92 (27%), Positives = 33/92 (35%)
Frame = -2
Query: 481 SCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRES 302
S A S S + S+ H P + RSA PP+ A + S G G G
Sbjct: 2 STASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVA-----AAGSGNGAGGGGGVGCAPAAG 56
Query: 301 CTRTVCLEPCGGRQPHHLQGDGDQAECDPPAA 206
R L+P P+ L + PP A
Sbjct: 57 AGR--LLQPIRATVPYQLLRGSQHSPTRPPVA 86
>U28049-1|AAA73861.1| 702|Homo sapiens TBX2 protein.
Length = 702
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 520 ACSAPRSRLILASSCARRSVSQAP--SRARHKPHHDVARSATTDPPSAAITCTSLSDSSQ 347
A + P + A++ A S+S++P AR + + T PPS ++ T L+
Sbjct: 577 ASALPATSAAAAAAAAAGSLSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLASEGS 636
Query: 346 KCGHGNA 326
K GN+
Sbjct: 637 KAAGGNS 643
>BC052566-1|AAH52566.1| 702|Homo sapiens T-box 2 protein.
Length = 702
Score = 29.5 bits (63), Expect = 8.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -2
Query: 520 ACSAPRSRLILASSCARRSVSQAP--SRARHKPHHDVARSATTDPPSAAITCTSLSDSSQ 347
A + P + A++ A S+S++P AR + + T PPS ++ T L+
Sbjct: 577 ASALPATSAAAAAAAAAGSLSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLASEGS 636
Query: 346 KCGHGNA 326
K GN+
Sbjct: 637 KAAGGNS 643
>BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like 1
(S. cerevisiae) protein.
Length = 743
Score = 29.5 bits (63), Expect = 8.0
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +3
Query: 336 WPHFCEE-------SDSEVQVIAAEGGSVVA--ERATSWCGLWRALLGACETDLRAQL 482
WP CE+ S++ ++ +A++GG V E CG W++L+GA + RAQ+
Sbjct: 238 WPEDCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVE-RAQI 294
>AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like 1
(bacterial) protein.
Length = 743
Score = 29.5 bits (63), Expect = 8.0
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +3
Query: 336 WPHFCEE-------SDSEVQVIAAEGGSVVA--ERATSWCGLWRALLGACETDLRAQL 482
WP CE+ S++ ++ +A++GG V E CG W++L+GA + RAQ+
Sbjct: 238 WPEDCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVE-RAQI 294
>AK097864-1|BAC05188.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ40545 fis, clone THYMU2001195. ).
Length = 193
Score = 29.5 bits (63), Expect = 8.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 475 ARRSVSQAPSRARH-KPHHDVARSATTDPPSAAITCTSLS 359
AR S + P RH +PHH S PS +T +L+
Sbjct: 101 ARLSALEGPRATRHHRPHHSFGSSPVGTSPSPTVTLVALT 140
>AK094362-1|BAC04338.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ37043 fis, clone BRACE2012061, weakly similar to
Possible threonine synthase. ).
Length = 576
Score = 29.5 bits (63), Expect = 8.0
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +3
Query: 336 WPHFCEE-------SDSEVQVIAAEGGSVVA--ERATSWCGLWRALLGACETDLRAQL 482
WP CE+ S++ ++ +A++GG V E CG W++L+GA + RAQ+
Sbjct: 71 WPEDCEQKVSAKFFSEAVIEGLASDGGLFVPAKEFPKLSCGEWKSLVGATYVE-RAQI 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,037,031
Number of Sequences: 237096
Number of extensions: 1647231
Number of successful extensions: 10650
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10645
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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