Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F14
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   4.6  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   4.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.1  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 417 TSWCGLWRAL 446
           T WC +WR+L
Sbjct: 116 TDWCDVWRSL 125


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 487 ASSCARRSVSQAPSRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNA 326
           A+  A R  S+A S     P       ATT  P+A+ T T  +  S      NA
Sbjct: 197 ANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNA 250


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 260 LPASARLEAHCS 295
           LPA+ R +AHC+
Sbjct: 76  LPANKRFQAHCA 87


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 260 LPASARLEAHCS 295
           LPA+ R +AHC+
Sbjct: 76  LPANKRFQAHCA 87


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
 Frame = -2

Query: 478 CARRSVSQAPSRAR-HKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYTQRES 302
           CA R +     RA+ H   H       T      +T     +S  + GHG+      R S
Sbjct: 227 CAARRIVLEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQLNSDVQPGHGSPPVKQHRSS 286

Query: 301 CTRTVC 284
              T C
Sbjct: 287 SASTTC 292


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -2

Query: 448  SRARHKPHHDVARSATTDPPSAAITCTSLSDSSQKCGHGNAGGYT 314
            S  +H PHH +  S +    +  ++  S+  S+Q     +A   T
Sbjct: 913  SNQQHFPHHQIQVSTSAGLQTIRLSGHSVLHSAQSVVASSASNVT 957


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/50 (24%), Positives = 18/50 (36%)
 Frame = +3

Query: 315 VYPPALPWPHFCEESDSEVQVIAAEGGSVVAERATSWCGLWRALLGACET 464
           ++ P  P P  CE ++    V+ +  GS            WR    A  T
Sbjct: 228 IFVPVKPCPWICELTNDAGYVVYSALGSFYIPMLVMLFFYWRIYNAAVST 277


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,962
Number of Sequences: 438
Number of extensions: 2746
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)