Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F07
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical p... 64 5e-11
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 27 4.9
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 6.5
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 27 6.5
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z54235-1|CAA90971.1| 416|Caenorhabditis elegans Hypothetical pr... 27 8.6
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 27 8.6
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 27 8.6
>Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical
protein C14A4.11 protein.
Length = 215
Score = 64.1 bits (149), Expect = 5e-11
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +3
Query: 165 ASQTLRAALTKAETAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGTLTEAECADLRLNR 344
A L ALT E A P YD ++ +++ VN+ ES LR+ T + DL ++
Sbjct: 37 ALNKLHTALTTCEQASPSFLYDFTKVLLDDSELSVNLQESYLRMHDT---SPTNDLIVSG 93
Query: 345 SEEA--FQELNKKSSALKKILRRIPDEITDRKTFLETIK 455
E+ ++EL K++ L+++L R+P+E++DR FLETIK
Sbjct: 94 YEQNADYKELTKRAIELRRVLSRVPEEMSDRHAFLETIK 132
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical
protein T01C4.1 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 282 SLLRLQGTLTEAECADLRLNRSEEAFQELNKK 377
S+ L+G ++ CA+L + SE+ F E+N++
Sbjct: 41 SVQELEGLNSKKSCANLAVGLSEQEFTEMNEE 72
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +3
Query: 282 SLLRLQGTLTEAECADLRLNRSEEAFQELNKKSSAL----KKILRRIPDEITDRKTFLE 446
S L + EA+C D LNR L KK L +K L ++ + + ++ F+E
Sbjct: 106 SRLEISDLKGEAKCHDSELNRLYTIINNLEKKVEDLNGEHQKSLEKLKERLHEKDAFIE 164
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 264 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 323
Query: 438 FL 443
L
Sbjct: 324 ML 325
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 127 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 186
Query: 438 FL 443
L
Sbjct: 187 ML 188
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 264 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 323
Query: 438 FL 443
L
Sbjct: 324 ML 325
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 239 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 298
Query: 438 FL 443
L
Sbjct: 299 ML 300
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 230 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 289
Query: 438 FL 443
L
Sbjct: 290 ML 291
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 205 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 264
Query: 438 FL 443
L
Sbjct: 265 ML 266
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 290 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 349
Query: 438 FL 443
L
Sbjct: 350 ML 351
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 IPVNMNESLLRLQGTLTEAECADLR-LNRSEEAFQELNKKSSALKKILRRIPDEITDRKT 437
+P N +E + +GT+ +A C +R L + E + ++ +L+ + D + + +
Sbjct: 265 LPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEE 324
Query: 438 FL 443
L
Sbjct: 325 ML 326
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 306 LTEAECADLRLNRSEEAFQELN 371
+TEA C DLR+N ++E + +N
Sbjct: 471 MTEASCKDLRINAAKEIRKAIN 492
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.6 bits (56), Expect = 8.6
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 135 LTQLEKYDLGASQTLRAALTKAETAVPGLNYDLVAGIMRRADIPVNMNESLLRL----QG 302
L +L+ + + L+ + E L +++ I AD M + RL Q
Sbjct: 489 LAELQALRIEMERRLQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQA 548
Query: 303 TLTEAECADLRLNRSEEAFQELNKKSSALKKILR 404
+ E E LNR+ Q+ KK S KIL+
Sbjct: 549 EIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQ 582
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 26.6 bits (56), Expect = 8.6
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 135 LTQLEKYDLGASQTLRAALTKAETAVPGLNYDLVAGIMRRADIPVNMNESLLRL----QG 302
L +L+ + + L+ + E L +++ I AD M + RL Q
Sbjct: 489 LAELQALRIEMERRLQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQA 548
Query: 303 TLTEAECADLRLNRSEEAFQELNKKSSALKKILR 404
+ E E LNR+ Q+ KK S KIL+
Sbjct: 549 EIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQ 582
>Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical
protein M05B5.6 protein.
Length = 481
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 322 HSASVRVPCKRSKLSFILTGMSARL 248
HSASV + + K+SF+ TGM R+
Sbjct: 393 HSASVAISDEAFKISFMETGMRLRI 417
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 QGTLTEAECADLRLNRSEE--AFQELNKKSSALKKILRRIPDEI 422
Q L EAECADL+ N + + +++ + +A + +R + DE+
Sbjct: 955 QKKLVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEM 998
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 QGTLTEAECADLRLNRSEE--AFQELNKKSSALKKILRRIPDEI 422
Q L EAECADL+ N + + +++ + +A + +R + DE+
Sbjct: 955 QKKLVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEM 998
>Z54235-1|CAA90971.1| 416|Caenorhabditis elegans Hypothetical
protein C09G9.1 protein.
Length = 416
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 333 RLNRSEEAFQELNKKSSALK---KILRRIPDEITDRKTFLETIK 455
R++ + +A ++L K S ++K K RRIP+E D FL+ ++
Sbjct: 341 RMDFTPQASKKLTKSSKSVKIIQKKSRRIPNEKDDFDRFLDAVQ 384
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 26.6 bits (56), Expect = 8.6
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +3
Query: 135 LTQLEKYDLGASQTLRAALTKAETAVPGLNYDLVAGIMRRADIPVNMNESLLRL----QG 302
L +L+ + + L+ + E L +++ I AD M + RL Q
Sbjct: 505 LAELQALRIEMERRLQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQA 564
Query: 303 TLTEAECADLRLNRSEEAFQELNKKSSALKKILR 404
+ E E LNR+ Q+ KK S KIL+
Sbjct: 565 EIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQ 598
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 QGTLTEAECADLRLNRSEE--AFQELNKKSSALKKILRRIPDEI 422
Q L EAECADL+ N + + +++ + +A + +R + DE+
Sbjct: 955 QKKLVEAECADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEM 998
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,880,328
Number of Sequences: 27780
Number of extensions: 118106
Number of successful extensions: 335
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -