Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F06
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4E73 Cluster: PREDICTED: hypothetical protein;... 91 2e-17
UniRef50_UPI0000D5779E Cluster: PREDICTED: similar to Host cell ... 89 6e-17
UniRef50_Q9V4C8 Cluster: Host cell factor (dHcf) [Contains: HCF ... 89 7e-17
UniRef50_Q16XE7 Cluster: Host cell factor C1; n=1; Aedes aegypti... 88 1e-16
UniRef50_A2AF09 Cluster: Host cell factor C1; n=6; Euarchontogli... 85 9e-16
UniRef50_P51610 Cluster: Host cell factor (HCF) (HCF-1) (C1 fact... 85 9e-16
UniRef50_Q4T119 Cluster: Chromosome undetermined SCAF10748, whol... 85 1e-15
UniRef50_Q86F72 Cluster: Clone ZZD1054 mRNA sequence; n=1; Schis... 82 8e-15
UniRef50_Q4SR57 Cluster: Chromosome 11 SCAF14528, whole genome s... 81 1e-14
UniRef50_Q7Q2R1 Cluster: ENSANGP00000003420; n=1; Anopheles gamb... 79 8e-14
UniRef50_UPI0000DB6D81 Cluster: PREDICTED: similar to host cell ... 78 1e-13
UniRef50_Q18654 Cluster: Hcf1 related protein 1; n=2; Caenorhabd... 77 2e-13
UniRef50_A7T8W0 Cluster: Predicted protein; n=1; Nematostella ve... 77 2e-13
UniRef50_UPI0000ECD2BD Cluster: Host cell factor 2 (HCF-2) (C2 f... 73 3e-12
UniRef50_Q9Y5Z7 Cluster: Host cell factor 2; n=27; Amniota|Rep: ... 72 7e-12
UniRef50_UPI000065F52A Cluster: Host cell factor 2 (HCF-2) (C2 f... 67 2e-10
UniRef50_Q8WPM0 Cluster: Similar to host cell factor; n=1; Oikop... 64 2e-09
UniRef50_UPI0000E49860 Cluster: PREDICTED: similar to HCF; n=1; ... 52 1e-05
UniRef50_Q2JC08 Cluster: Acyl-CoA synthetases (AMP-forming)/AMP-... 34 2.2
UniRef50_Q98S73 Cluster: Putative uncharacterized protein orf625... 33 2.9
UniRef50_A2GA80 Cluster: Leucine Rich Repeat family protein; n=1... 33 3.9
UniRef50_Q1MSY2 Cluster: Novel protein similar to vertebrate tel... 32 8.9
>UniRef50_UPI00015B4E73 Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 1589
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQD----IKST-GV 173
G N C VP SLSAAHVD++TKPAIIFRI+ARN+KGYGPATQVRWLQD +K+ V
Sbjct: 1502 GPTNACSVPNKSLSAAHVDTTTKPAIIFRISARNDKGYGPATQVRWLQDPTTAVKNNMQV 1561
Query: 174 KR-TGEGRLSGASPSKQTK 227
KR + R SP K+ K
Sbjct: 1562 KRPVADVRSQANSPQKKVK 1580
>UniRef50_UPI0000D5779E Cluster: PREDICTED: similar to Host cell
factor (HCF) (HCF-1) (C1 factor) (VP16 accessory protein)
(VCAF) (CFF); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Host cell factor (HCF) (HCF-1) (C1 factor)
(VP16 accessory protein) (VCAF) (CFF) - Tribolium
castaneum
Length = 1170
Score = 89.0 bits (211), Expect = 6e-17
Identities = 39/53 (73%), Positives = 48/53 (90%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKST 167
G N+CVVP S+L+AAH+D+STK AIIFRIAA+N+KGYGPATQVRWLQD ++T
Sbjct: 1093 GPNNSCVVPNSTLAAAHLDTSTKAAIIFRIAAKNDKGYGPATQVRWLQDSQTT 1145
>UniRef50_Q9V4C8 Cluster: Host cell factor (dHcf) [Contains: HCF
N-terminal chain; HCF C- terminal chain]; n=4;
Sophophora|Rep: Host cell factor (dHcf) [Contains: HCF
N-terminal chain; HCF C- terminal chain] - Drosophila
melanogaster (Fruit fly)
Length = 1500
Score = 88.6 bits (210), Expect = 7e-17
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQD 155
G AN C VP +SLS AHVD S KPAIIFRIAARN+KGYGPATQVRWLQD
Sbjct: 1406 GAANQCTVPNASLSNAHVDCSNKPAIIFRIAARNQKGYGPATQVRWLQD 1454
>UniRef50_Q16XE7 Cluster: Host cell factor C1; n=1; Aedes aegypti|Rep:
Host cell factor C1 - Aedes aegypti (Yellowfever
mosquito)
Length = 1735
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/88 (55%), Positives = 54/88 (61%), Gaps = 13/88 (14%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKS-------- 164
G N C VP SL AHVD ++KPAIIFRIAARN+KGYGPATQVRWLQD +S
Sbjct: 1635 GPNNQCTVPNQSLLTAHVDQTSKPAIIFRIAARNDKGYGPATQVRWLQDPQSAKGTPAPG 1694
Query: 165 -----TGVKRTGEGRLSGASPSKQTKQA 233
TG RLS SPS TK+A
Sbjct: 1695 AAGQATGSSSAAVKRLSDKSPSTNTKRA 1722
>UniRef50_A2AF09 Cluster: Host cell factor C1; n=6;
Euarchontoglires|Rep: Host cell factor C1 - Mus musculus
(Mouse)
Length = 611
Score = 85.0 bits (201), Expect = 9e-16
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIK--STGVKRT 182
G + +C+V SSLS AH+D +TKPAIIFRIAARNEKGYGPATQVRWLQ+ S+G K
Sbjct: 530 GPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGTKPA 589
Query: 183 GEGRLSGASPSKQTKQA 233
+ +S K++
Sbjct: 590 SKRPMSSPEMKSAPKKS 606
>UniRef50_P51610 Cluster: Host cell factor (HCF) (HCF-1) (C1 factor)
(VP16 accessory protein) (VCAF) (CFF) [Contains: HCF
N-terminal chain 1; HCF N-terminal chain 2; HCF
N-terminal chain 3; HCF N-terminal chain 4; HCF
N-terminal chain 5; HCF N-terminal chain 6; HCF
C-terminal chain 1; HCF C- terminal chain 2; HCF
C-terminal chain 3; HCF C-terminal chain 4; HCF
C-terminal chain 5; HCF C-terminal chain 6]; n=32;
Eumetazoa|Rep: Host cell factor (HCF) (HCF-1) (C1 factor)
(VP16 accessory protein) (VCAF) (CFF) [Contains: HCF
N-terminal chain 1; HCF N-terminal chain 2; HCF
N-terminal chain 3; HCF N-terminal chain 4; HCF
N-terminal chain 5; HCF N-terminal chain 6; HCF
C-terminal chain 1; HCF C- terminal chain 2; HCF
C-terminal chain 3; HCF C-terminal chain 4; HCF
C-terminal chain 5; HCF C-terminal chain 6] - Homo
sapiens (Human)
Length = 2035
Score = 85.0 bits (201), Expect = 9e-16
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIK--STGVKRT 182
G + +C+V SSLS AH+D +TKPAIIFRIAARNEKGYGPATQVRWLQ+ S+G K
Sbjct: 1954 GPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGTKPA 2013
Query: 183 GEGRLSGASPSKQTKQA 233
+ +S K++
Sbjct: 2014 NKRPMSSPEMKSAPKKS 2030
>UniRef50_Q4T119 Cluster: Chromosome undetermined SCAF10748, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF10748, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1597
Score = 84.6 bits (200), Expect = 1e-15
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKSTG 170
G +C+VP SSL+ AH+D +TKPAIIFRIAARN+KGYGPATQVRWLQ S G
Sbjct: 1539 GPTPSCLVPASSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQGESSAG 1592
>UniRef50_Q86F72 Cluster: Clone ZZD1054 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1054 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 112
Score = 81.8 bits (193), Expect = 8e-15
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKST 167
G++ + V ++L+ AH+D S+KPA+IFRIAARNEKGYGPATQVRWLQD+ ST
Sbjct: 9 GQSPSATVTSATLATAHLDLSSKPAVIFRIAARNEKGYGPATQVRWLQDVSST 61
>UniRef50_Q4SR57 Cluster: Chromosome 11 SCAF14528, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14528, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1657
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQ 152
G +C+V SSLS AH+D +TKPAIIFRIAARNEKGYGPATQVRWLQ
Sbjct: 1607 GPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQ 1654
>UniRef50_Q7Q2R1 Cluster: ENSANGP00000003420; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000003420 - Anopheles gambiae
str. PEST
Length = 1382
Score = 78.6 bits (185), Expect = 8e-14
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQ 152
G N C V SL AHVD ++KPAIIFRIAARN+KGYGPATQVRWLQ
Sbjct: 1335 GSNNQCTVANQSLQTAHVDFTSKPAIIFRIAARNDKGYGPATQVRWLQ 1382
>UniRef50_UPI0000DB6D81 Cluster: PREDICTED: similar to host cell
factor C1; n=1; Apis mellifera|Rep: PREDICTED: similar to
host cell factor C1 - Apis mellifera
Length = 1550
Score = 78.2 bits (184), Expect = 1e-13
Identities = 46/86 (53%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKSTG------ 170
G N+C V SSLSAA+VD++ PAIIFRIAARN KGYGPATQVRWLQ +
Sbjct: 1459 GTNNSCSVSNSSLSAAYVDTTRTPAIIFRIAARNVKGYGPATQVRWLQQASVSSSDPTNF 1518
Query: 171 ------VKRTGEG-RLSGASPSKQTK 227
VKR G RL +SP K+ K
Sbjct: 1519 MENNPQVKRRGVNIRLQASSPQKKVK 1544
>UniRef50_Q18654 Cluster: Hcf1 related protein 1; n=2;
Caenorhabditis|Rep: Hcf1 related protein 1 -
Caenorhabditis elegans
Length = 782
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/56 (66%), Positives = 41/56 (73%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKSTGVK 176
G C V QS+L A VD + KPAIIFRIAARNEKGYGPATQVRWLQD + V+
Sbjct: 701 GPQADCQVLQSNLGTAFVDQTNKPAIIFRIAARNEKGYGPATQVRWLQDQQKIPVR 756
>UniRef50_A7T8W0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 318
Score = 77.0 bits (181), Expect = 2e-13
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQD 155
G TC V ++L +AH+D STK AIIFRIAA+N+KGYGPATQVRWLQD
Sbjct: 248 GAQPTCTVSLATLQSAHIDYSTKAAIIFRIAAKNDKGYGPATQVRWLQD 296
>UniRef50_UPI0000ECD2BD Cluster: Host cell factor 2 (HCF-2) (C2
factor).; n=2; Amniota|Rep: Host cell factor 2 (HCF-2)
(C2 factor). - Gallus gallus
Length = 725
Score = 73.3 bits (172), Expect = 3e-12
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQ 152
G +CVV + LS AHVD +++PAI+FRI+A+NE+GYGPATQVRWLQ
Sbjct: 669 GLKTSCVVTAAQLSNAHVDYTSRPAIVFRISAKNERGYGPATQVRWLQ 716
>UniRef50_Q9Y5Z7 Cluster: Host cell factor 2; n=27; Amniota|Rep:
Host cell factor 2 - Homo sapiens (Human)
Length = 792
Score = 72.1 bits (169), Expect = 7e-12
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQ 152
G +C+V L+ AH+D +++PAI+FRI+A+NEKGYGPATQVRWLQ
Sbjct: 736 GLKTSCIVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQ 783
>UniRef50_UPI000065F52A Cluster: Host cell factor 2 (HCF-2) (C2
factor).; n=1; Takifugu rubripes|Rep: Host cell factor 2
(HCF-2) (C2 factor). - Takifugu rubripes
Length = 737
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +3
Query: 6 RGKANTCVVPQSSLSAAHVD--SSTKPAIIFRIAARNEKGYGPATQVRWLQ 152
RG +C V Q+ L AH+D +S +PA++FRIAA+NE GYGPATQ+RW+Q
Sbjct: 686 RGTKTSCSVGQAHLDNAHIDCSASNRPAVVFRIAAKNELGYGPATQIRWVQ 736
>UniRef50_Q8WPM0 Cluster: Similar to host cell factor; n=1;
Oikopleura dioica|Rep: Similar to host cell factor -
Oikopleura dioica (Tunicate)
Length = 683
Score = 63.7 bits (148), Expect = 2e-09
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 9 GKANTCVVPQSSLS--AAHVDSSTKPAIIFRIAARNEKGYGPATQVRWLQDIKSTGVKR- 179
G C+V + LS A S K A+IFRIAA+N+KGYGPATQVRW+QD K +KR
Sbjct: 614 GHDAACIVSHALLSQAATSTSDSNKAAVIFRIAAKNKKGYGPATQVRWIQDAK---IKRP 670
Query: 180 TGEGRLSGASPSK 218
G + S A +K
Sbjct: 671 AGGAKNSDAKKAK 683
>UniRef50_UPI0000E49860 Cluster: PREDICTED: similar to HCF; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
HCF - Strongylocentrotus purpuratus
Length = 1216
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 9 GKANTCVVPQSSLSAAHVDSSTKPAIIFRIAARNEKG 119
G +CVV ++L+AAH+D ++KPAIIFRIAARN KG
Sbjct: 1180 GPNPSCVVSSANLAAAHIDCTSKPAIIFRIAARNVKG 1216
>UniRef50_Q2JC08 Cluster: Acyl-CoA synthetases
(AMP-forming)/AMP-acid ligases II-like; n=1; Frankia sp.
CcI3|Rep: Acyl-CoA synthetases (AMP-forming)/AMP-acid
ligases II-like - Frankia sp. (strain CcI3)
Length = 408
Score = 33.9 bits (74), Expect = 2.2
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 146 PPDLRGGPIALLVASRYTEYDGRLR--GGVHVGGTQRGLR-DDARVRFT 9
PPDLRG +ALL R EY G G + VG G+ D A +R T
Sbjct: 207 PPDLRGRLLALLGGDRLAEYYGTAEYDGTLRVGAADGGVPIDGAEIRIT 255
>UniRef50_Q98S73 Cluster: Putative uncharacterized protein orf625;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf625 - Guillardia theta (Cryptomonas phi)
Length = 625
Score = 33.5 bits (73), Expect = 2.9
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -2
Query: 416 INIYY*KTSYIEISFGEAKFYVLFSHTIYLFF 321
I+I+Y K +I+I F E+K Y+ + + + +FF
Sbjct: 36 IDIFYLKKKFIDIKFIESKIYIFYGNCLLIFF 67
>UniRef50_A2GA80 Cluster: Leucine Rich Repeat family protein; n=1;
Trichomonas vaginalis G3|Rep: Leucine Rich Repeat family
protein - Trichomonas vaginalis G3
Length = 825
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 238 CNACLVCFEGDAPDSLPSPVRFTPVDFISCNHLTCVA 128
C +C C + PD + + + T VDF SCN +TCVA
Sbjct: 408 CISCNSCKFTEFPDVVYTLTKLTHVDF-SCNQITCVA 443
>UniRef50_Q1MSY2 Cluster: Novel protein similar to vertebrate
telomere-associated protein RIF1 homolog; n=4; Danio
rerio|Rep: Novel protein similar to vertebrate
telomere-associated protein RIF1 homolog - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 2347
Score = 31.9 bits (69), Expect = 8.9
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 27 VVPQSSLSAAHVDSSTKPAIIFRIAARNEKGYGPATQVR---WLQDIK-STGVKRTGEGR 194
VVPQSS S A +DS KP ++ ++ E G P T+ R W ST + + G+ R
Sbjct: 1990 VVPQSSTSEACLDSPPKPKLLSALSGELEPGQSP-TRSRSRVWSPSASPSTSILKKGQKR 2048
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,483,721
Number of Sequences: 1657284
Number of extensions: 8991458
Number of successful extensions: 24617
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24609
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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