Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F06
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 80  GHHIPYSGSQREGLWARHAGQVVARYKI 163
           G H P SG  +EG + + +G  +A Y++
Sbjct: 347 GVHAPASGGGKEGTYTKESG-FLAYYEV 373


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -2

Query: 437 LYKHWIYINIYY*KTSYIEISFGEAKFYVLFSHTIYLFFT 318
           L+  ++++  Y     +++ +  E K+Y + SH   +FFT
Sbjct: 136 LFVRYVFVTSYLLFDYFVQRN-QEYKYYQILSHLSGIFFT 174


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 143 PDLRGGPIALLVA 105
           P LRG P+A+L A
Sbjct: 30  PSLRGTPLAMLAA 42


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 70  EESTWAALNEDCGTTHVFALPL 5
           E S     NE C  THV  +PL
Sbjct: 492 ESSVSNCENEYCECTHVVNIPL 513


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 358 FMYFLVIQFIYFSLNHIFLI 299
           F+Y   + +IY+S++   +I
Sbjct: 150 FIYLFTVYYIYYSVHEASII 169


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 81  PASWRSPRGRHS 46
           P S+ SPR RHS
Sbjct: 227 PMSFSSPRRRHS 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,995
Number of Sequences: 336
Number of extensions: 2496
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)