Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F05
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    43   2e-06
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    27   0.072
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.095
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
          1-alpha protein.
          Length = 56

 Score = 42.7 bits (96), Expect = 2e-06
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +3

Query: 24 TTEVKSVEMHHEALQEAVPG 83
          TTEVKSVEMHHEAL EAVPG
Sbjct: 37 TTEVKSVEMHHEALPEAVPG 56


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 281 LQICRNQRESRPSYCVNQPEDNPKSIKSGDAAIVNLVPS 397
           L  C NQ +  P   V  PE  P +I  G+   V LVP+
Sbjct: 139 LASCLNQGQKEPQVQVIVPEVAPNNIILGNGTGVQLVPT 177


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory
          receptor candidate 15 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.095
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 22 ALLKSSPWKCTTRLYKKLYPVTMLV 96
          A+  SS +   T+LY+KLYPV M +
Sbjct: 17 AITPSSIYDKPTKLYQKLYPVLMFL 41


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 6   EIRHECTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 125
           ++  E  T+ K  + H++  Q   PG+   +N ++ +V E
Sbjct: 289 QMNQEYRTDRKHTQQHYQMNQNMYPGEM--YNPEHTTVNE 326


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 6   EIRHECTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 125
           ++  E  T+ K  + H++  Q   PG+   +N ++ +V E
Sbjct: 237 QMNQEYRTDRKHTQQHYQMNQNMYPGEM--YNPEHTTVNE 274


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 6   EIRHECTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 125
           ++  E  T+ K  + H++  Q   PG+   +N ++ +V E
Sbjct: 420 QMNQEYRTDRKHTQQHYQMNQNMYPGEM--YNPEHTTVNE 457


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 164 THPRELLTTSTTAIDCAKSPRSNIKRIH 247
           +HP  L   +   I   +SP  N+K+I+
Sbjct: 594 SHPFHLHGYAFNVIGIGRSPDQNVKKIN 621


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 164 THPRELLTTSTTAIDCAKSPRSNIKRIH 247
           +HP  L   +   +   +SP  N+K+I+
Sbjct: 594 SHPFHLHGYAFNVVGIGRSPDQNVKKIN 621


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 128  APWLRCTRF*KTTHPRELLTTSTT 199
            +PW   T   +TT  R   T++TT
Sbjct: 1049 SPWWTTTTTRRTTTTRPTTTSTTT 1072


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,562
Number of Sequences: 336
Number of extensions: 3142
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)