Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F04
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   3.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   4.6  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   4.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.0  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 481 WMPDVVYLNVPSLYLH 434
           W+PD  ++N    Y H
Sbjct: 123 WVPDTFFVNEKQSYFH 138


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 278 LSEAGYDVWFANAR 319
           L+EA   VWF+N R
Sbjct: 259 LTEARIQVWFSNRR 272


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +3

Query: 144 STGYPMRRTLNLKHHLGRLYYSIMVCSV-VQLIGS*---LDLKKPWPTSYPKLVTMSGLQ 311
           +TG  +  T N +     + + ++ C + V + GS     DL++ + T+Y  + T+    
Sbjct: 25  ATGNIIHTTSNKQLQFFAVEHLLIQCYIAVSIFGSSSFEADLRQFYKTAYSAIFTVIDFS 84

Query: 312 TPEAILILKLT 344
             +AIL+  +T
Sbjct: 85  LCKAILVHAIT 95


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 144 STGYPMRRTLNLKHHLGRLYYSIMV 218
           +TGY +R+   L+ H+  L+Y+ ++
Sbjct: 76  TTGYKLRKGTILQLHIYDLHYNPVI 100


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 93  TRLRHTQSLLKMATSSQSTGY 155
           T   H Q++  MA + Q TGY
Sbjct: 322 TTQNHMQAMNNMAGTYQMTGY 342


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +2

Query: 29  YKCTDDPANQMTTPQLLALNGYPAE 103
           Y+C D    +   P  +  N Y +E
Sbjct: 56  YECNDGQITEKLCPDGMVFNDYSSE 80


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 469  VVYLNVPSLYLHYVV 425
            + Y+ VPS+YL  V+
Sbjct: 1007 IYYVTVPSMYLLLVI 1021


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 469  VVYLNVPSLYLHYVV 425
            + Y+ VPS+YL  V+
Sbjct: 1007 IYYVTVPSMYLLLVI 1021


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,765
Number of Sequences: 336
Number of extensions: 2745
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)