Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F04
(493 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 114 8e-27
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 109 3e-25
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 102 3e-23
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 26 2.7
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 26 3.5
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 4.7
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 25 6.2
SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein L21|Sc... 25 6.2
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 114 bits (274), Expect = 8e-27
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +2
Query: 89 GYPAEAHTVLTKDGYILTIHRIPYAKNAKSKTPPRKTVLLHHGLLGSSADWILAGP-KKA 265
GY E H V T+D +IL +HRI + K ++ K R+ V HHGL+ +S W+ +++
Sbjct: 83 GYRVEEHLVRTQDNFILCLHRITHPKQSQHK---REVVYCHHGLMTNSELWVAVNESERS 139
Query: 266 LAYILSEAGYDVWFANARGNTYSKAHISKNIDTFAFWNFTFHDISQNDLPAVIDYIMEIK 445
L ++L E+GYDVW N RGN YS+ HI+ FWNF+ D++ D+P +DYI+
Sbjct: 140 LPFVLIESGYDVWLGNNRGNKYSRKHITYKPKDEEFWNFSLDDMAMFDIPDTVDYILRET 199
Query: 446 GWDVKINYIG 475
G + K+NYIG
Sbjct: 200 GRE-KLNYIG 208
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 109 bits (261), Expect = 3e-25
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Frame = +2
Query: 71 QLLALNGYPAEAHTVLTKDGYILTIHRIPYAKNAKSKTP-PRK--TVLLHHGLLGSSADW 241
++ ++GY E H V T+D YIL IHRI + +P P+K V HHGLL +S W
Sbjct: 83 EMCKISGYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCHHGLLMNSEVW 142
Query: 242 IL-AGPKKALAYILSEAGYDVWFANARGNTYSKAHISKNIDTFAFWNFTFHDISQNDLPA 418
+ P+ L + L GYDVW N RGN YS+ H+ + FW+F+ D +Q D+P
Sbjct: 143 VCNVDPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFDSTDKEFWDFSIDDFAQYDIPD 202
Query: 419 VIDYIMEIKGWDVKINYIG 475
IDYI++ G K+ YIG
Sbjct: 203 TIDYILKTSG-QTKLTYIG 220
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 102 bits (244), Expect = 3e-23
Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Frame = +2
Query: 41 DDPANQMT----TPQLLALNGYPAEAHTVLTKDGYILTIHRIPYAKNAKSKT----PPRK 196
DD AN++T T L AL+GY E H V T DGY+L +HR+ K K + PP
Sbjct: 63 DDNANKLTDARDTIDLCALHGYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPP-- 120
Query: 197 TVLLHHGLLGSSADWILAGPKK-ALAYILSEAGYDVWFANARGNTYSKAHISKNIDTFAF 373
VL HGL+ +S W+ K+ A+ + L E GYDVW N RGN YS +I + F
Sbjct: 121 -VLFIHGLMMNSESWVCNLKKEDAIPFALVEQGYDVWLGNLRGNKYSIKNIKFSSQNPKF 179
Query: 374 WNFTFHDISQNDLPAVIDYIMEIKGWDVKINYIG 475
W+F+ I+ D+P+++ YI+ + +D I+ +G
Sbjct: 180 WDFSLDSIAIFDIPSIVKYILSVNSFD-SISLVG 212
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 2.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 176 SKTPPRKTVLLHHGLLGSSADW 241
+K PP VL+ HGLLGS +W
Sbjct: 18 AKHPP---VLIFHGLLGSKRNW 36
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 3.5
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 71 QLLALNGYPAEAHTVLTKDGYILTIHRIPYAKNAKSKTPPRKTVLLHHGLLGSSADWILA 250
QLL +N A+A +L DG R P ++ PR+ V LL + +++
Sbjct: 197 QLLHINPDQADAPVLLKTDG-----GRWP---TIWAEDTPRELVTTRRELLKWTVEFMSV 248
Query: 251 GPKKALAYILSEAGYD 298
PKK L +L+E D
Sbjct: 249 APKKQLIRLLAEYAKD 264
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 41 DDPANQMTTPQLLALNGYPAEAHTVLTKDGYILTIHR 151
D P + + T N P +AH + + DG+I I +
Sbjct: 1081 DIPVDTLITSPADVPNNAPTDAHNITSADGHIENIEQ 1117
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.0 bits (52), Expect = 6.2
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 125 DGYILTIHRIPYAKNAKSKTPPRKTVLLHHGLLGSSADWILAGPKKALAYILSEAGYDVW 304
DG IL R+ AK A + ++ ++ G+ S + GP + +LSE G +
Sbjct: 787 DG-ILFGSRLMVAKEAHTSLAAKEAIVAAKGVDDSEWEKTYDGPTGGIVTVLSELGEPIH 845
Query: 305 FANARGNTYSK 337
RG + K
Sbjct: 846 KLATRGIMFWK 856
>SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 25.0 bits (52), Expect = 6.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 56 QMTTPQLLALNGYPAEAHTVLTKDGYILTIHRIPY 160
Q T QL PA+AH V T++ +T+H + Y
Sbjct: 122 QGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAY 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,210,233
Number of Sequences: 5004
Number of extensions: 46691
Number of successful extensions: 111
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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