Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F04
         (493 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)       135   2e-32
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)             133   7e-32
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)        99   2e-21
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.6  
SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.8  
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_53106| Best HMM Match : PLAT (HMM E-Value=0)                        27   8.4  

>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score =  135 bits (327), Expect = 2e-32
 Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +2

Query: 44  DPANQMTTPQLLALNGYPAEAHTVLTKDGYILTIHRIPYAKNAKSKTPPRKTVL-LHHGL 220
           DP       QL+   GYP E H V T DG+IL + RIP+ +N   +   RK V+ L HGL
Sbjct: 101 DPDIDRNASQLIRNRGYPVEEHYVTTSDGFILNLQRIPHGRNELREGSGRKPVVFLQHGL 160

Query: 221 LGSSADWILAGPKKALAYILSEAGYDVWFANARGNTYSKAHISKNIDTFAFWNFTFHDIS 400
           L  S +W+L  P  +L YIL++ G+DVW  N RGN YS AH+  N D+  FW++T+  ++
Sbjct: 161 LMDSTNWVLNSPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDSSKFWDWTWQQMA 220

Query: 401 QNDLPAVIDYIMEIKGWDVKINYIGH 478
           Q DLPA+IDY+  +     ++ Y+GH
Sbjct: 221 QYDLPAMIDYV-TLATSQSQVFYVGH 245


>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score =  133 bits (322), Expect = 7e-32
 Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
 Frame = +2

Query: 47  PANQMTTPQLLALNGYPAEAHTVLTKDGYILTIHRIPYAKNAKSK-TPPRKTVLLHHGLL 223
           P   M   QL+  NGYP E + V T+DGYIL++ RIPY +  K K    +  V L HGLL
Sbjct: 292 PEVHMNVTQLIQYNGYPVEDYDVTTEDGYILSVQRIPYGREGKCKGVKDKPVVFLQHGLL 351

Query: 224 GSSADWILAGPKKALAYILSEAGYDVWFANARGNTYSKAHISKNIDTFAFWNFTFHDISQ 403
            S+ +W+     ++  +IL++  +DVW  N RGNTY K H+   +D+ AFW+F+F ++++
Sbjct: 352 CSATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDAFWDFSFDEMAK 411

Query: 404 NDLPAVIDYIMEIKGWDVKINYIGH 478
            DLPA+ID++ +  G    + Y GH
Sbjct: 412 YDLPAMIDFVTKTTG-QASLYYAGH 435


>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
          Length = 226

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +2

Query: 149 RIPYAKNAKSK-TPPRKTVLLHHGLLGSSADWILAGPKKALAYILSEAGYDVWFANARGN 325
           RIPY +  K K    +  V L HGLL S+ +W+     ++  +IL++  +DVW  N RGN
Sbjct: 3   RIPYGRKGKCKGVKDKPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRGN 62

Query: 326 TYSKAHISKNIDTFAFWNFTFHDISQNDLPAVIDYIMEIKGWDVKINYIGH 478
           TY K H+   +D+ AFW+F+F ++++ DLPA+ID++ +  G    + Y GH
Sbjct: 63  TYGKRHVKLPVDSDAFWDFSFDEMAKYDLPAMIDFVTKTTG-QASLYYAGH 112


>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4994

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 204  NTVFRGGVLDLAFFA*GILWIVRM*PSLVRTVCASA 97
            N   RGG LDL FF   ++ +V++   ++RT C +A
Sbjct: 3391 NDTVRGGHLDLVFFKDAMIHLVKV-SRIIRTPCGNA 3425


>SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 941

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 152 IPYAKNAKSKTPPRKTVLLHHGLLGSSADWIL 247
           IP  K    +TPPR  V+LH+    +S DW++
Sbjct: 46  IPQYKQEIPETPPR--VILHYNTFKTSWDWVI 75


>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 386 FHDISQNDLPAVIDYIMEIKGWDVKINYIGH 478
           F ++++ DLPA+ID++ +  G    + Y GH
Sbjct: 2   FDEMAKYDLPAMIDFVTKTTG-QASLYYAGH 31


>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
          Length = 1790

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 484  PWMPDVVYLNVPSLYLHYVVDNGR 413
            PW+ + V++++PS   HYV   GR
Sbjct: 990  PWLLEEVHVDIPSRNEHYVFKCGR 1013


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,773,093
Number of Sequences: 59808
Number of extensions: 355023
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)