Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F04
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   1.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.3  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    22   9.9  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 481 WMPDVVYLNVPSLYLHYVVDNGR*VVLA 398
           W+PD  + N  + +LH V +  + V LA
Sbjct: 98  WVPDTFFANDKNSFLHDVTERNKLVRLA 125


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 159 MRRTLNLKHHLGRLYYSIMVCSVVQLIG 242
           + RTL L+H  G L  S++VC  ++  G
Sbjct: 386 LERTLWLQHLSGLLAASMVVCHAIERNG 413


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 159 MRRTLNLKHHLGRLYYSIMVCSVVQLIG 242
           + RTL L+H  G L  S++VC  ++  G
Sbjct: 386 LERTLWLQHLSGLLAASMVVCHAIERNG 413


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 156 GILWIVRM*PSLVRTVCASAGYP 88
           G  + VRM P L R++ AS+G P
Sbjct: 107 GRTYSVRMGPHLSRSLRASSGVP 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,171
Number of Sequences: 2352
Number of extensions: 12919
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)