Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_F04
(493 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 0.76
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.0
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 2.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 3.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 4.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.1
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 4.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.1
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 4.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.4
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 24.2 bits (50), Expect = 0.76
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 400 PERLTGRYRLHNGDK 444
P RLT YR H G+K
Sbjct: 104 PARLTRHYRTHTGEK 118
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLHYVVDNGR*VVLA 398
W+PD + N + +LH V + + V L+
Sbjct: 117 WVPDTFFANDKNSFLHDVTERNKLVRLS 144
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.0
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 296 DVWFANARGNTYSKAHISKNIDTFAFWNFTFHDISQNDLPAVIDYIMEIKGWDVKIN 466
D+ N R NT K + + W +++ ++ V Y+++ K WD+K N
Sbjct: 220 DIKHINTRHNT--KNGMKTLLSETDIWEVE-QILAKKEIKGVPTYLIKWKNWDLKYN 273
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.6 bits (46), Expect = 2.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 320 LWRLQTRHRNQLRIGCRPRLF*VQLRSNQL 231
LW L + N + C P+LF L ++QL
Sbjct: 140 LWVLDSGLVNNTQPMCSPKLFAFDLNTSQL 169
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.6 bits (46), Expect = 2.3
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 320 LWRLQTRHRNQLRIGCRPRLF*VQLRSNQL--NYRADHDGVIQSS 192
LW L + N +R C P+L L ++QL + HD + ++
Sbjct: 133 LWVLDSGLINNVRSVCPPQLLVFDLNTSQLLKQVKIPHDIAVNTT 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 376 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 408
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 444 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 476
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 38 TDDPANQMTTPQLLALNGYPAEAHTVLTKDGYI 136
T PA T L L+G E HT+L + +I
Sbjct: 444 TGRPATVEDTSASLPLSGMQEELHTILKELRFI 476
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLHYVVDNGR*VVL 401
W PD + N YLH + + V L
Sbjct: 86 WKPDTYFYNGKHSYLHTITSPNKFVRL 112
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLH 434
W+PD ++N Y H
Sbjct: 94 WVPDTFFVNEKQSYFH 109
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLH 434
W+PD ++N Y H
Sbjct: 94 WVPDTFFVNEKQSYFH 109
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 320 LWRLQTRHRNQLRIGCRPRLF*VQLRSNQL 231
LW L + N +++ C P+L L +++L
Sbjct: 139 LWVLDSGLINNIQLMCSPKLLAFDLNTSKL 168
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 4.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLH 434
W+PD ++N Y H
Sbjct: 33 WVPDTFFVNEKQSYFH 48
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 50 ANQMTTPQLLALNGYPAEAH 109
A + TPQLL L+G + H
Sbjct: 321 AGSVNTPQLLMLSGIGPKEH 340
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLHYVV 425
WMPD+ + N + H ++
Sbjct: 116 WMPDLFFSNEKEGHFHNII 134
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -1
Query: 481 WMPDVVYLNVPSLYLHYVV 425
WMPD+ + N + H ++
Sbjct: 116 WMPDLFFSNEKEGHFHNII 134
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,634
Number of Sequences: 438
Number of extensions: 3406
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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