Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F02
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   9.9  

>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 329 TSSPRH*IKPQAKGLF 376
           TS+  H + PQ++GLF
Sbjct: 200 TSANFHYLSPQSRGLF 215


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/49 (20%), Positives = 20/49 (40%)
 Frame = +3

Query: 282 SKGCVTASSQSAAANQPVHPDIR*NHKPKVCSRSWRNTGQKLRQSGKSV 428
           S GCV+           + P +    KP+V +    N  ++ ++   S+
Sbjct: 83  SHGCVSKILNRYQETGSIRPGVIGGSKPRVATPEVENRIEQYKRENPSI 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = -3

Query: 245 RDRSLVGWMSWPIAKFFVLFSNRGF 171
           R  S +GW  W + + + L     F
Sbjct: 563 RPISTLGWFFWSLLRIYELARKAAF 587


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,237
Number of Sequences: 336
Number of extensions: 1832
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)