Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F02
         (469 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   118   5e-27
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   118   5e-27
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   118   5e-27
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   118   5e-27
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   118   5e-27

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  118 bits (283), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 178 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 357
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 358 TS 363
           T+
Sbjct: 96  TA 97



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 353 KPQAKGLFKILEKYRPET 406
           K  A  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  118 bits (283), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 178 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 357
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 358 TS 363
           T+
Sbjct: 96  TA 97



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 353 KPQAKGLFKILEKYRPET 406
           K  A  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  118 bits (283), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 178 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 357
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 358 TS 363
           T+
Sbjct: 96  TA 97



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 353 KPQAKGLFKILEKYRPET 406
           K  A  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  118 bits (283), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 178 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 357
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 358 TS 363
           T+
Sbjct: 96  TA 97



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 353 KPQAKGLFKILEKYRPET 406
           K  A  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  118 bits (283), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 178 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 357
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 358 TS 363
           T+
Sbjct: 96  TA 97



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 353 KPQAKGLFKILEKYRPET 406
           K  A  LFK+LEKYRPE+
Sbjct: 94  KTTAVKLFKLLEKYRPES 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,474,540
Number of Sequences: 53049
Number of extensions: 313254
Number of successful extensions: 835
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)