Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F01
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p pro...    27   7.7  
AF285759-1|AAG41905.1| 1330|Drosophila melanogaster d-spinophili...    27   7.7  
AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA...    27   7.7  

>AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p protein.
          Length = 1858

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 311  IQSRSERAVTAQNEETLTSLVVSQALRNYHSDPRPQCHQK 192
            + S S  + ++ N+ T     ++Q     H DP  Q HQ+
Sbjct: 1498 LNSTSSASSSSSNQSTAREAQINQLYAQVHKDPSKQQHQQ 1537


>AF285759-1|AAG41905.1| 1330|Drosophila melanogaster d-spinophilin,
            core domains protein.
          Length = 1330

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 311  IQSRSERAVTAQNEETLTSLVVSQALRNYHSDPRPQCHQK 192
            + S S  + ++ N+ T     ++Q     H DP  Q HQ+
Sbjct: 970  LNSTSSASSSSSNQSTAREAQINQLYAQVHKDPSKQQHQQ 1009


>AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA
            protein.
          Length = 2145

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 311  IQSRSERAVTAQNEETLTSLVVSQALRNYHSDPRPQCHQK 192
            + S S  + ++ N+ T     ++Q     H DP  Q HQ+
Sbjct: 1785 LNSTSSASSSSSNQSTAREAQINQLYAQVHKDPSKQQHQQ 1824


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,211,652
Number of Sequences: 53049
Number of extensions: 241987
Number of successful extensions: 576
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)