Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_F01
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              25   0.38 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   0.50 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   0.87 
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   1.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   6.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   6.1  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.1  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 238 HYVITIQIPVPNVIKNKLINPY 173
           H  IT+ IPVP      +IN Y
Sbjct: 49  HKPITLTIPVPQAANKGMINQY 70


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 314 PIQSRSERAVTAQNEETLTSLVVSQALRNYHSDPRPQCHQ 195
           P+Q R    + AQNEETL ++V  + +    S+   + H+
Sbjct: 336 PLQ-RENMDMVAQNEETLQTVVAMKMMHLPQSNKMNRMHR 374


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 0.87
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 311 IQSRSERAVTAQNEETLTSLVVSQALRN 228
           +  R    V AQNEETL  +V  + + N
Sbjct: 338 VLQRESFDVVAQNEETLQMIVSMKIMEN 365


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 73  ARYYLNKSGNIL*NTSHLVLTVRLG 147
           A YY NK G  +   SH  L   LG
Sbjct: 13  ANYYENKDGARIVKASHFELDYMLG 37


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 202 HWGRGSEW 225
           HW RG+ W
Sbjct: 22  HWSRGNTW 29


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 202 HWGRGSEW 225
           HW RG+ W
Sbjct: 22  HWSRGNTW 29


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 358 FNYYVNRIVVIFYFS 314
           F+Y +  I++I+Y+S
Sbjct: 218 FSYCIPMILIIYYYS 232


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 238  HYVITIQIP 212
            HY +T+Q+P
Sbjct: 1396 HYTLTVQVP 1404


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 238  HYVITIQIP 212
            HY +T+Q+P
Sbjct: 1392 HYTLTVQVP 1400


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,328
Number of Sequences: 438
Number of extensions: 2234
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)