Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E24
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF291873-1|AAG01548.1| 533|Drosophila melanogaster DNA primase ... 30 1.8
AF160895-1|AAD46835.1| 533|Drosophila melanogaster GM13640p pro... 30 1.8
AE014296-3340|AAF51580.2| 533|Drosophila melanogaster CG5553-PA... 30 1.8
BT014646-1|AAT27270.1| 177|Drosophila melanogaster RE54374p pro... 28 7.4
BT003534-1|AAO39538.1| 1174|Drosophila melanogaster RE09558p pro... 28 7.4
AY119143-1|AAM51003.1| 201|Drosophila melanogaster RE48077p pro... 28 7.4
AY094786-1|AAM11139.1| 777|Drosophila melanogaster LD14031p pro... 28 7.4
AE014296-3391|AAS65078.1| 177|Drosophila melanogaster CG5059-PD... 28 7.4
AE014296-3390|AAN12137.1| 177|Drosophila melanogaster CG5059-PC... 28 7.4
AE014296-3389|AAN12136.1| 193|Drosophila melanogaster CG5059-PB... 28 7.4
AE014296-3388|AAF51619.1| 201|Drosophila melanogaster CG5059-PA... 28 7.4
AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,... 28 7.4
AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,... 28 7.4
>AF291873-1|AAG01548.1| 533|Drosophila melanogaster DNA primase
protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 348 WDEVFTKKKDADRFCNVFVPALRPLPQYPKLSALNSQQHYQCLKVL 485
W E FTKK DAD+F + Y K ++ + Y C K++
Sbjct: 338 WREEFTKKMDADKFTRSY--EYNIYHNYGKKGSMVNYTPYSCAKII 381
>AF160895-1|AAD46835.1| 533|Drosophila melanogaster GM13640p
protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 348 WDEVFTKKKDADRFCNVFVPALRPLPQYPKLSALNSQQHYQCLKVL 485
W E FTKK DAD+F + Y K ++ + Y C K++
Sbjct: 338 WREEFTKKMDADKFTRSY--EYNIYHNYGKKGSMVNYTPYSCAKII 381
>AE014296-3340|AAF51580.2| 533|Drosophila melanogaster CG5553-PA
protein.
Length = 533
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 348 WDEVFTKKKDADRFCNVFVPALRPLPQYPKLSALNSQQHYQCLKVL 485
W E FTKK DAD+F + Y K ++ + Y C K++
Sbjct: 338 WREEFTKKMDADKFTRSY--EYNIYHNYGKKGSMVNYTPYSCAKII 381
>BT014646-1|AAT27270.1| 177|Drosophila melanogaster RE54374p
protein.
Length = 177
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 117 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 168
>BT003534-1|AAO39538.1| 1174|Drosophila melanogaster RE09558p protein.
Length = 1174
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +3
Query: 210 CSSQLDTEFVMEEDLDNCVTEKILRNKFHDPLVSSDSENETNNKINWDEVFTKKKDADRF 389
C++ +EF E D D+ IL + + D N+K+++ F K + F
Sbjct: 988 CAATAISEFKFESDEDS-----ILTSLGDSDIDIQDEIQVINDKVDYCNDFQNNKMLESF 1042
Query: 390 CNVFVPALRPLPQYPKLSALNSQQHYQCLKVLCNQNPNILRGY 518
++FV +LR + + S H L+ L +N + + Y
Sbjct: 1043 NSIFVDSLRTNTKNAS-DNMGSSAHITSLESLKPENADAITRY 1084
>AY119143-1|AAM51003.1| 201|Drosophila melanogaster RE48077p
protein.
Length = 201
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 141 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 192
>AY094786-1|AAM11139.1| 777|Drosophila melanogaster LD14031p
protein.
Length = 777
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +3
Query: 210 CSSQLDTEFVMEEDLDNCVTEKILRNKFHDPLVSSDSENETNNKINWDEVFTKKKDADRF 389
C++ +EF E D D+ IL + + D N+K+++ F K + F
Sbjct: 591 CAATAISEFKFESDEDS-----ILTSLGDSDIDIQDEIQVINDKVDYCNDFQNNKMLESF 645
Query: 390 CNVFVPALRPLPQYPKLSALNSQQHYQCLKVLCNQNPNILRGY 518
++FV +LR + + S H L+ L +N + + Y
Sbjct: 646 NSIFVDSLRTNTKNAS-DNMGSSAHITSLESLKPENADAITRY 687
>AE014296-3391|AAS65078.1| 177|Drosophila melanogaster CG5059-PD,
isoform D protein.
Length = 177
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 117 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 168
>AE014296-3390|AAN12137.1| 177|Drosophila melanogaster CG5059-PC,
isoform C protein.
Length = 177
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 117 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 168
>AE014296-3389|AAN12136.1| 193|Drosophila melanogaster CG5059-PB,
isoform B protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 133 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 184
>AE014296-3388|AAF51619.1| 201|Drosophila melanogaster CG5059-PA,
isoform A protein.
Length = 201
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 454 EFKADNFGYCGRGRSAGTNTLQNRSASFFLVKTSSQLILLLVSFSESLDTRG 299
E K N GY R + G+N+L +R + L+ T+ +LL F L RG
Sbjct: 141 EKKKTNTGYSIRLKRLGSNSLFSREILYSLLVTNVLSLLLGAGFGLWLSKRG 192
>AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,
isoform B protein.
Length = 1483
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +3
Query: 210 CSSQLDTEFVMEEDLDNCVTEKILRNKFHDPLVSSDSENETNNKINWDEVFTKKKDADRF 389
C++ +EF E D D+ IL + + D N+K+++ F K + F
Sbjct: 1297 CAATAISEFKFESDEDS-----ILTSLGDSDIDIQDEIQVINDKVDYCNDFQNNKMLESF 1351
Query: 390 CNVFVPALRPLPQYPKLSALNSQQHYQCLKVLCNQNPNILRGY 518
++FV +LR + + S H L+ L +N + + Y
Sbjct: 1352 NSIFVDSLRTNTKNAS-DNMGSSAHITSLESLKPENADAITRY 1393
>AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,
isoform A protein.
Length = 1483
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/103 (23%), Positives = 44/103 (42%)
Frame = +3
Query: 210 CSSQLDTEFVMEEDLDNCVTEKILRNKFHDPLVSSDSENETNNKINWDEVFTKKKDADRF 389
C++ +EF E D D+ IL + + D N+K+++ F K + F
Sbjct: 1297 CAATAISEFKFESDEDS-----ILTSLGDSDIDIQDEIQVINDKVDYCNDFQNNKMLESF 1351
Query: 390 CNVFVPALRPLPQYPKLSALNSQQHYQCLKVLCNQNPNILRGY 518
++FV +LR + + S H L+ L +N + + Y
Sbjct: 1352 NSIFVDSLRTNTKNAS-DNMGSSAHITSLESLKPENADAITRY 1393
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,538,418
Number of Sequences: 53049
Number of extensions: 459527
Number of successful extensions: 1050
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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