Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E23
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.                   31   3.7  
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.              31   3.7  

>M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.
          Length = 2444

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 24/81 (29%), Positives = 31/81 (38%)
 Frame = -1

Query: 380  TFLMEVGFVHEIFESVVNPVD*SACLIDGTFF*GFSSTNLNCTH*FFFINRTGDG*QHLL 201
            T L   GF     + VVN  D   CL+ GT   G       C   +     TG   Q+L+
Sbjct: 1007 TCLCPPGFTGSYCQHVVNECDSRPCLLGGTCQDGRGLHRCTCPQGY-----TGPNCQNLV 1061

Query: 200  PTTNAYCDRQPASQAWRLWQT 138
                 +CD  P     + WQT
Sbjct: 1062 ----HWCDSSPCKNGGKCWQT 1078


>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
          Length = 2556

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 24/81 (29%), Positives = 31/81 (38%)
 Frame = -1

Query: 380  TFLMEVGFVHEIFESVVNPVD*SACLIDGTFF*GFSSTNLNCTH*FFFINRTGDG*QHLL 201
            T L   GF     + VVN  D   CL+ GT   G       C   +     TG   Q+L+
Sbjct: 1007 TCLCPPGFTGSYCQHVVNECDSRPCLLGGTCQDGRGLHRCTCPQGY-----TGPNCQNLV 1061

Query: 200  PTTNAYCDRQPASQAWRLWQT 138
                 +CD  P     + WQT
Sbjct: 1062 ----HWCDSSPCKNGGKCWQT 1078


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,376,582
Number of Sequences: 237096
Number of extensions: 1896490
Number of successful extensions: 3918
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3905
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)