Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E22
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79601-2|CAB01886.1| 482|Caenorhabditis elegans Hypothetical pr... 285 2e-77
U00043-9|AAC77506.1| 474|Caenorhabditis elegans Temporarily ass... 281 2e-76
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 29 2.4
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 29 2.4
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 29 2.4
Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical pr... 28 4.2
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 28 4.2
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 28 4.2
Z83102-9|CAI79156.1| 82|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 28 5.6
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 28 5.6
AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein. 28 5.6
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 28 5.6
AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical ... 28 5.6
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF025450-3|AAB70932.1| 331|Caenorhabditis elegans Hypothetical ... 27 9.8
AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical ... 27 9.8
AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z79601-2|CAB01886.1| 482|Caenorhabditis elegans Hypothetical
protein K09A9.5 protein.
Length = 482
Score = 285 bits (698), Expect = 2e-77
Identities = 128/172 (74%), Positives = 150/172 (87%)
Frame = +2
Query: 71 KLLNIDIPLRAKYIRTLFAEITRILNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYER 250
KLL IDIP RAKYIRTL E+TRI NHIM + THALDVGA+TPFFW+FEEREK+ EF ER
Sbjct: 176 KLLGIDIPTRAKYIRTLMGELTRIQNHIMGITTHALDVGAMTPFFWMFEEREKLFEFSER 235
Query: 251 VSGARMHAAYIRPGGVSLDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIG 430
VSGARMHA Y+RPGGV+ D+PIGLMDDIY+++ KF ER+DE+ED+LT NRIW RT DIG
Sbjct: 236 VSGARMHANYVRPGGVAWDLPIGLMDDIYDWAIKFPERIDELEDMLTENRIWKARTIDIG 295
Query: 431 VVTAQDALNYGFSGVMLRGSGIKWDLRKSQPYDAYDQVEFDVPIGTHGDCYD 586
+V+A DALN+GFSGVM+RGSGIK D+RK++PYDAY +EFDVPIGT GDCYD
Sbjct: 296 LVSAADALNWGFSGVMVRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYD 347
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 10 FDRLDYVSMMCNEQCYS 60
FDRLDYVSMMCNEQ +S
Sbjct: 155 FDRLDYVSMMCNEQAWS 171
>U00043-9|AAC77506.1| 474|Caenorhabditis elegans Temporarily
assigned gene nameprotein 99 protein.
Length = 474
Score = 281 bits (690), Expect = 2e-76
Identities = 125/172 (72%), Positives = 149/172 (86%)
Frame = +2
Query: 71 KLLNIDIPLRAKYIRTLFAEITRILNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYER 250
KLL ID+P RAKYIR LF E+TRI NHIM + THALDVGA+TPFFW+FEEREK+ EF ER
Sbjct: 168 KLLGIDVPPRAKYIRILFGELTRIQNHIMGITTHALDVGAMTPFFWMFEEREKLFEFSER 227
Query: 251 VSGARMHAAYIRPGGVSLDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIG 430
VSGARMHA Y+RPGGV+ D+P+GLMDDIY+++ KF R+DE+ED+LT NRIW RT DIG
Sbjct: 228 VSGARMHANYVRPGGVAWDLPVGLMDDIYDWAVKFPARIDELEDMLTENRIWKARTVDIG 287
Query: 431 VVTAQDALNYGFSGVMLRGSGIKWDLRKSQPYDAYDQVEFDVPIGTHGDCYD 586
+V+A DALN+GFSGVM+RGSGIK D+RK++PYDAY +EFDVPIGT GDCYD
Sbjct: 288 LVSASDALNWGFSGVMVRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYD 339
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 10 FDRLDYVSMMCNEQCYS 60
FDRLDYVSMMCNEQ +S
Sbjct: 147 FDRLDYVSMMCNEQAFS 163
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 165 PTAIMWFSIRVISANRVLMYLARSGISMLSSFQRRAVALLVAHHGDVVEP 16
PT + SI + ANR LM A++G ++F + ++A D+V+P
Sbjct: 162 PTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKP 211
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 165 PTAIMWFSIRVISANRVLMYLARSGISMLSSFQRRAVALLVAHHGDVVEP 16
PT + SI + ANR LM A++G ++F + ++A D+V+P
Sbjct: 146 PTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKP 195
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 165 PTAIMWFSIRVISANRVLMYLARSGISMLSSFQRRAVALLVAHHGDVVEP 16
PT + SI + ANR LM A++G ++F + ++A D+V+P
Sbjct: 143 PTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKP 192
>Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical
protein F26D10.8 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -2
Query: 201 NGVRAPTSSAWVPTAIMWF----SIRVISANRVLMYL-ARSGISMLSS 73
NG + SAW+ + MWF S+ I +L YL R+ +S++SS
Sbjct: 187 NGTKTLNQSAWIGVSQMWFMIMSSMSCIFGFAILCYLRLRAQLSIVSS 234
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 212 FEEREKMMEFYERVSGARMHAAYIRPGGVSLD 307
+EE ++ +++ERV ARM + ++PGG L+
Sbjct: 189 YEEIKEGFDYWERVINARMMSDSMKPGGDILE 220
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 212 FEEREKMMEFYERVSGARMHAAYIRPGGVSLD 307
+EE ++ +++ERV ARM + ++PGG L+
Sbjct: 189 YEEIKEGFDYWERVINARMMSDSMKPGGDILE 220
>Z83102-9|CAI79156.1| 82|Caenorhabditis elegans Hypothetical
protein C54C8.12 protein.
Length = 82
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 181 RGRSHSVLLAVRGEREDDGVLRESQRSQNARRIHPPRRGFT-*HANW 318
+ RSH + GE ED ++ + ARR PRR + H+NW
Sbjct: 34 KARSHGHPVNTLGESEDPNFQVDNVPGERARRHAGPRRFYRFYHSNW 80
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 364 PLSELR*ELIYIVHQTNWHVK*NPAGADVCGV 269
P+ R E+ +I HQ H+K P+ DVCG+
Sbjct: 102 PVRGNRGEMAHI-HQVKQHIKPTPSMKDVCGI 132
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 364 PLSELR*ELIYIVHQTNWHVK*NPAGADVCGV 269
P+ R E+ +I HQ H+K P+ DVCG+
Sbjct: 100 PVRGNRGEMAHI-HQVKQHIKPTPSMKDVCGI 130
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 157 HYVVQYTGDFSEQSPDVLGAKWYIDVEQF 71
+YVV YTGD + P +L ID+ F
Sbjct: 133 NYVVSYTGDVLQVPPGILKLSCKIDITYF 161
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 302 LDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIGVVT 439
+ M +DD+ F+S+ E +DE ++T + ++ T D+ V+T
Sbjct: 168 ISMTTSTLDDVTTFNSEINEEMDEETVLMTWEDVTIKLT-DVDVMT 212
>AY077614-1|AAL79358.1| 550|Caenorhabditis elegans KSR-2a protein.
Length = 550
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 302 LDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIGVVT 439
+ M +DD+ F+S+ E +DE ++T + ++ T D+ V+T
Sbjct: 208 ISMTTSTLDDVTTFNSEINEEMDEETVLMTWEDVTIKLT-DVDVMT 252
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 302 LDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIGVVT 439
+ M +DD+ F+S+ E +DE ++T + ++ T D+ V+T
Sbjct: 168 ISMTTSTLDDVTTFNSEINEEMDEETVLMTWEDVTIKLT-DVDVMT 212
>AL137227-4|CAB70239.2| 550|Caenorhabditis elegans Hypothetical
protein F58D5.4a protein.
Length = 550
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 302 LDMPIGLMDDIYEFSSKFAERLDEVEDVLTTNRIWVQRTKDIGVVT 439
+ M +DD+ F+S+ E +DE ++T + ++ T D+ V+T
Sbjct: 208 ISMTTSTLDDVTTFNSEINEEMDEETVLMTWEDVTIKLT-DVDVMT 252
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 27 RLHDVQRAVLQLAVENCSTSIYHFAPSTSGLCSLKSPV 140
+LHDV+ + ++N S +F P+ S + S+K V
Sbjct: 145 KLHDVENIYGSITIQNSSIRNLNFLPNLSRIRSIKDKV 182
>AF025450-3|AAB70932.1| 331|Caenorhabditis elegans Hypothetical
protein C41H7.4 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 513 LRRSHLIPEPRSITPLKP 460
+++ H+ P PR+ITPL P
Sbjct: 4 IKQEHMHPPPRAITPLPP 21
>AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical
protein C41H7.5 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 513 LRRSHLIPEPRSITPLKP 460
+++ H+ P PR+ITPL P
Sbjct: 4 IKQEHMNPPPRTITPLPP 21
>AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical
protein C49G7.7 protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 380 DVLTTNRIWVQRTKDIGVVTAQDALNYGF 466
DVL NR+W++ + + + AQD +Y F
Sbjct: 107 DVLVINRVWLRISPYLTFLAAQDYYHYFF 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,907,634
Number of Sequences: 27780
Number of extensions: 260407
Number of successful extensions: 747
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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