Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E19
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.52 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   0.91 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   0.91 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   0.91 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   0.91 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.4  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -2

Query: 459 CTGDGLFGIETVGGNTGGSGFLLNKAARDGGGFTSSSNPCFLN 331
           CT D   G  +VG   G        AA   G   S +NPC +N
Sbjct: 144 CTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCSIN 186


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 454 RRWSLWY*NSRRQHRRQWFFTQQSCT*RWRFYFL 353
           R+  +W+ N R + ++   FT+QS T  + F  L
Sbjct: 225 RQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFLSL 258


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 408 GSGFLLNKAARDGGGFTSSSNPC 340
           G  F  NK  R    +TSS NPC
Sbjct: 671 GDCFYENKFYRQEAQWTSSDNPC 693


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 454 RRWSLWY*NSRRQHRRQWFFTQQSCT*RWRFYFL 353
           R+  +W+ N R + ++   FT+QS T  + F  L
Sbjct: 225 RQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFLSL 258


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 454 RRWSLWY*NSRRQHRRQWFFTQQSCT*RWRFYFL 353
           R+  +W+ N R + ++   FT+QS T  + F  L
Sbjct: 225 RQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFLSL 258


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 454 RRWSLWY*NSRRQHRRQ 404
           R+  +W+ N R +H+RQ
Sbjct: 46  RQVKVWFQNRRMKHKRQ 62


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 454 RRWSLWY*NSRRQHRRQ 404
           R+  +W+ N R +H+RQ
Sbjct: 177 RQVKVWFQNRRMKHKRQ 193


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 340 LPKLGMKSFYSFRFWFIRFS 281
           L  L   +FY  R W + FS
Sbjct: 120 LDDLSEDTFYDIRLWGVSFS 139


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -3

Query: 242 RSIWEFFLVFVL 207
           R++W+FF +F++
Sbjct: 409 RTVWKFFNIFLI 420


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,199
Number of Sequences: 336
Number of extensions: 1545
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)