Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E17
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.77 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   9.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.77
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = -2

Query: 239 PALGVLHVLDADVDAFR*DPAADALVHDHAESVCGHIVNTPCLTVVYFVWHTLLYSAIAP 60
           P L   H +DA +  F  + +     +++ E  C H+VN P  TVV  V   L+    A 
Sbjct: 476 PLLSQRHQIDAKM--FCNESSVSNCENEYCE--CTHVVNIPLGTVVEMV---LIDKGYAY 528

Query: 59  NVNDVSHFVHFH 24
           + N   H +H H
Sbjct: 529 DANHPFH-LHGH 539


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 90  PHKVYHGKTGR 122
           PH  Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 353 NMRSLWRCRLSLQVNYFAGGFSFLQQP 273
           ++ S  R R  ++V+ F  GFS   QP
Sbjct: 170 DIESALRLREEIKVDPFMTGFSHRNQP 196


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 136 VTL*TRPVLPWYTLCGIP 83
           V L    ++ WYT+C +P
Sbjct: 9   VNLGLNGLIDWYTVCLVP 26


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 223 FTCSMRMLMRFGRILPRTRLFT 158
           + C+  + + F  +LP  R FT
Sbjct: 155 YVCNTTIFLIFHSVLPIKRFFT 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,324
Number of Sequences: 336
Number of extensions: 1748
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)