Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E17
(456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 171 2e-43
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.40
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 30 0.92
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 30 0.92
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 28 3.7
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical... 27 4.9
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 8.6
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 8.6
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 8.6
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 27 8.6
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 8.6
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 27 8.6
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 27 8.6
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 8.6
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 171 bits (417), Expect = 2e-43
Identities = 85/135 (62%), Positives = 101/135 (74%), Gaps = 2/135 (1%)
Frame = +3
Query: 12 LSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILP 191
LSTY YK GD+VDI+ NGA QKGMP K YHG+TGR++NVT A+G+IVNKRVRG ILP
Sbjct: 27 LSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILP 86
Query: 192 KRINIRIEHVKHSKCRQDFLKRVKENERLLKEAKAAGK-VVNLKRQPAPPKAAHIVSGA- 365
KRINIRIEH+K SKCR DFL RVK N+ K AK+AG+ V LKR P P+ AH V+
Sbjct: 87 KRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQN 146
Query: 366 EKPVLLAPIPYEFVA 410
+P LLAP+ +E VA
Sbjct: 147 NEPELLAPLRFEIVA 161
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 312 NLKRQPAPPKAAHIVSGAE 368
NL+R+PAPPK H+ S AE
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.9 bits (64), Expect = 0.92
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +3
Query: 186 LPKRINIRIEHVKHSKCRQDFLKRVKENERLLKEAKAAGKVVNLKRQPAPPKAAHIVSGA 365
LP RI V+ + ++ +R KE+E + +++ + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 366 EKPVLLAPIPYE 401
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.9 bits (64), Expect = 0.92
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +3
Query: 186 LPKRINIRIEHVKHSKCRQDFLKRVKENERLLKEAKAAGKVVNLKRQPAPPKAAHIVSGA 365
LP RI V+ + ++ +R KE+E + +++ + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 366 EKPVLLAPIPYE 401
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 134 DRTRSRRDREQARPRQDPTETHQHPHRAREALQVQAGLPQARQGERKAVE 283
DR+ RR R++ PR+ P E P R R A + P+ ++G R++ E
Sbjct: 300 DRSEQRRHRDEPPPRRAPQE---QPSRRRGASPPEP--PRRQEGARRSEE 344
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 134 DRTRSRRDREQARPRQDPTETHQHPHRAREALQVQAGLPQARQGERKAVE 283
DR+ RR R++ PR+ P E P R R A + P+ ++G R++ E
Sbjct: 408 DRSEQRRHRDEPPPRRAPQE---QPSRRRGASPPEP--PRRQEGARRSEE 452
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 28.3 bits (60), Expect = 2.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 140 CGHIVNTPCLTVVYFVWHT 84
CG +++TPCL VV+ H+
Sbjct: 320 CGALISTPCLVVVFVFGHS 338
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 107 R*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAR 220
R DR+ + DR +SR DRE+ R RQD ++T R R
Sbjct: 400 RDDRSEERKDR-KSRDDRERPRSRQDKSKTRSVEDRPR 436
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -2
Query: 116 CLTVVYFVWHTLLYSAIAPNVNDVSHFVHFHVRG 15
C+++ + T +Y I +N +SH ++ H +G
Sbjct: 21 CISIFLIIASTTMYIFIGLKINHISHRLYNHAKG 54
>AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical
protein T05H4.2 protein.
Length = 405
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 320 LQVNYFAGGFS-FLQQPFVLLDALEEVLPALGVLHVLDADVDAF 192
L ++YFA + +++ FV DA+ +VL ++G+L +D F
Sbjct: 206 LDMDYFAIIMTEIMEEEFVSFDAINDVLKSIGILSAKSVLLDWF 249
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 210 IEHVKHSKCRQDFLKRVKENERLLKEAKAAGKVVN--LKRQPAPPKAAHIVSGAEKPVLL 383
+E+V + K+N++ K++++ KV ++ PAPP+ +V EKPV
Sbjct: 361 VENVVEKSTTPPATENKKKNKKDKKKSESE-KVTEQPVESAPAPPQVEQVVEKVEKPV-- 417
Query: 384 API 392
AP+
Sbjct: 418 APV 420
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 273 RLLKEAKAAGKVVNLKRQPAPPKAAHIVSGAEK 371
RL ++ AA + R P P K AH+ +G +K
Sbjct: 603 RLSQKRSAAALIDEQSRSPPPAKRAHLSNGFDK 635
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 273 RLLKEAKAAGKVVNLKRQPAPPKAAHIVSGAEK 371
RL ++ AA + R P P K AH+ +G +K
Sbjct: 1666 RLSQKRSAAALIDEQSRSPPPAKRAHLSNGFDK 1698
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 143 RSRRDREQARPRQDPTETHQHPHRAREALQVQAGLPQARQGERKAVE 283
++ R+REQ R +++ E + + REA +++A + ++ ERK E
Sbjct: 1204 KAEREREQERLKREEEEERKRLEQLREAEKLKAEI--EKENERKLQE 1248
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 143 RSRRDREQARPRQDPTETHQHPHRAREALQVQAGLPQARQGERKAVE 283
++ R+REQ R +++ E + + REA +++A + ++ ERK E
Sbjct: 1204 KAEREREQERLKREEEEERKRLEQLREAEKLKAEI--EKENERKLQE 1248
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 138 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 197
Query: 272 KA 277
+A
Sbjct: 198 QA 199
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 138 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 197
Query: 272 KA 277
+A
Sbjct: 198 QA 199
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 191 ETHQHPHRAREALQVQAG 244
E+H HPHR R+ L + G
Sbjct: 217 ESHLHPHRTRQLLHTREG 234
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQA-GLPQARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 138 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ 197
Query: 272 KA 277
+A
Sbjct: 198 QA 199
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 95 QSIPR*DRACLQCDRTRSRRDREQARPRQDPTETHQHPHRAREALQVQAGLP-QARQGER 271
Q I + A Q + + + +QAR + + Q H+A + Q QA QARQ E+
Sbjct: 115 QQIMQHQLAQQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQXQARQQEQ 174
Query: 272 KA 277
+A
Sbjct: 175 QA 176
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 143 RSRRDREQARPRQDPTETHQHPHRAREALQVQAGLPQARQGERKAVE 283
++ R+REQ R +++ E + + REA +++A + ++ ERK E
Sbjct: 1204 KAEREREQERLKREEEEERKRLEQLREAEKLKAEI--EKENERKLQE 1248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,350,165
Number of Sequences: 27780
Number of extensions: 182366
Number of successful extensions: 754
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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