Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E16
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.40 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   2.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.0  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   8.7  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 166  LQETILDCPYVAKAILKLLPGVPKERIEKHILFNQLATENI 288
            ++  + +CP  A+   +LL GV  E +E H+L +     N+
Sbjct: 966  VEHVMFECPRFAEVRSELLDGVLPETLEAHMLQSPTNWSNV 1006


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 526 RSDQTWL*LQSYDEPPQPAKYKTNN 452
           +S   W+  QSY   P P K +T +
Sbjct: 192 KSPYEWMKKQSYQSQPNPGKTRTKD 216


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 22   QWLVDLIDTIRGKEKLPEFIVSLKYSYALARF 117
            +WL+D+I   R +  +PE  +     Y  A F
Sbjct: 1147 RWLMDVIGYARDRANMPELNMKQILDYKAAYF 1178


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 148 SEVDTLLQETILDCPYVAKAILKLLPGVPKER 243
           S +  LL  TIL    +   +  L+PG P+ER
Sbjct: 65  STLSVLLGTTILVGGVLGCVLDNLIPGTPEER 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,393
Number of Sequences: 2352
Number of extensions: 15315
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)