Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E15
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 170 9e-43
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 152 2e-37
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 146 2e-35
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 124 6e-29
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 76 3e-14
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 51 6e-07
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 46 3e-05
07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584 40 0.002
11_06_0506 - 24380469-24380632,24381737-24383893,24384488-243845... 37 0.014
06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 35 0.058
01_05_0162 + 18759647-18759663,18760128-18760131,18760270-187606... 35 0.058
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 34 0.077
03_02_0538 + 9299639-9300046,9300362-9300509,9300648-9300652,930... 33 0.13
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 30 1.2
07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,274... 29 2.2
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 29 2.2
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 29 2.2
02_05_0375 + 28387091-28387597 29 2.2
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 29 2.2
09_06_0089 + 20781086-20782985,20783463-20783538,20783593-207836... 29 2.9
03_01_0094 + 749906-750204,751238-751357,751452-751521,751701-75... 29 2.9
11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480 29 3.8
11_01_0260 - 1985258-1985794,1986874-1986990 28 5.0
09_04_0419 + 17411172-17411282,17412634-17413788 28 5.0
03_05_0232 + 22174516-22174768,22175278-22175471,22175557-221756... 28 5.0
02_02_0252 + 8323087-8323523,8323929-8324019,8324155-8324281,832... 28 5.0
01_06_1538 - 38094982-38095149,38095230-38095597,38095960-380960... 28 5.0
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810... 28 6.7
07_03_0284 + 16249497-16249993,16250950-16251069,16251166-162512... 28 6.7
09_06_0210 - 21597470-21598093 27 8.8
01_06_0658 - 30942890-30943054,30943159-30943266,30943448-309435... 27 8.8
01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359 27 8.8
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 170 bits (413), Expect = 9e-43
Identities = 88/205 (42%), Positives = 130/205 (63%), Gaps = 8/205 (3%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQ-KEKICKEAVWFLSNI 189
H V ALR +GNIVTG D QTQ +++ AL +LL+ K+ I KEA W +SNI
Sbjct: 295 HPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNI 354
Query: 190 TAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVI 369
TAGNK Q+QAVI+AG++ +V L EF +KEAAWA+SN + G+ +Q+ L++ G I
Sbjct: 355 TAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCI 414
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLK-------MAGENADQVANIIEECGGIDQIEALQ 528
P C+LL C D +++ V L+GL N+LK +A + + + +I+E G+++IE LQ
Sbjct: 415 KPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQ 474
Query: 529 SHEKVEIFKMAYDIFEQYFGGDEED 603
SH+ EI++ A I E Y+ +E+D
Sbjct: 475 SHDNNEIYEKAVKILEAYWMDEEDD 499
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
+V T A A+ + GT+++ Q V+ LL H + A+ + NI G+
Sbjct: 257 EVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDD 316
Query: 205 QQVQAVIDAGLLPKIVENLAKG-EFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFC 381
Q Q +ID LP ++ L + + +KEA W +SN++ +G K+Q+ A+IN G+I P
Sbjct: 317 AQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNIT-AGNKDQIQAVINAGIIGPLV 375
Query: 382 NLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEE 495
NLL + + +SN +G + DQ+ ++ E
Sbjct: 376 NLLQTAEFDIKKEAAWAISN--ATSGGSHDQIKYLVSE 411
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
++Q A A+ NI +GT E T+VV++ A+ F LL + + ++AVW L N+ AG+
Sbjct: 131 QLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNV-AGDS 189
Query: 205 QQVQAVI--DAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPF 378
+ + ++ + LLP + + + + A W +SN K Q +P
Sbjct: 190 PKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRG--KPQPSFEQTRPALPAL 247
Query: 379 CNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIE 492
L+ D +V+ LS + G N D++ +IE
Sbjct: 248 ARLIHSNDEEVLTDACWALSYL--SDGTN-DKIQAVIE 282
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +1
Query: 109 ALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQK 288
AL L+ E++ +A W LS ++ G ++QAVI+AG+ P++VE L
Sbjct: 243 ALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLI 302
Query: 289 EAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLS 393
A V N+ V+G Q +I+ +P +LL+
Sbjct: 303 PALRTVGNI-VTGDDAQTQCIIDHQALPCLLSLLT 336
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 152 bits (368), Expect = 2e-37
Identities = 87/223 (39%), Positives = 129/223 (57%), Gaps = 25/223 (11%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQ-KEKICKEAVWFLSNI 189
H V ALR +GNIVTG D QTQ V++ AL LL++ K+ I KEA W +SNI
Sbjct: 301 HPSASVLIPALRTVGNIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNI 360
Query: 190 TAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGA------- 348
TAGN++Q+QAVI+A ++ +V L EF +KEAAWA+SN + GT +Q+
Sbjct: 361 TAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKIFHCHYGL 420
Query: 349 ----------LINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLK-------MAGENADQV 477
L+ G I P C+LL C D +++ V L+GL N+LK + + +
Sbjct: 421 LTTYEMSTRYLVAQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDVNSY 480
Query: 478 ANIIEECGGIDQIEALQSHEKVEIFKMAYDIFEQYFGGDEEDA 606
A +I++ G+++IE LQSH+ EI++ A + E Y+ +E+DA
Sbjct: 481 AQMIDDAEGLEKIENLQSHDNTEIYEKAVKMLESYWLEEEDDA 523
Score = 71.7 bits (168), Expect = 4e-13
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Frame = +1
Query: 16 KEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITA 195
++ +V T A A+ + GT+++ Q V+ LL H + A+ + NI
Sbjct: 260 QDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLIPALRTVGNIVT 319
Query: 196 GNKQQVQAVIDAGLLPKIVENLAKGEFQT-QKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
G+ Q Q VID LP ++ L ++ +KEA W +SN++ +G +EQ+ A+IN +I
Sbjct: 320 GDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNIT-AGNREQIQAVINANIIA 378
Query: 373 PFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQV 477
P +LL + + +SN +G DQ+
Sbjct: 379 PLVHLLQTAEFDIKKEAAWAISN--ATSGGTHDQI 411
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEF-QTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNL 387
++ VI+ G++P+ + L + ++ Q Q EAAWA++N++ SGT + ++ G +P F L
Sbjct: 114 IEEVINTGVVPRFIAFLQREDYPQLQFEAAWALTNIA-SGTSDNTKVVVESGAVPIFVKL 172
Query: 388 LSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGI-DQIEALQSHEKVEIFKMA 561
LS V + L N +AG+ + + +++ GG+ ++ L H K+ + + A
Sbjct: 173 LSSPSEDVREQAVWALGN---VAGD-SPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNA 227
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +1
Query: 109 ALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQK 288
ALS L+ Q E++ +A W LS ++ G ++QAVI++G+ P++VE L
Sbjct: 249 ALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLI 308
Query: 289 EAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLS 393
A V N+ V+G Q +I+ +P NLL+
Sbjct: 309 PALRTVGNI-VTGDDMQTQCVIDHQALPCLLNLLT 342
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
++Q A A+ NI +GT + T+VV+ A+ F LLS E + ++AVW L N+ AG+
Sbjct: 137 QLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNV-AGDS 195
Query: 205 QQVQAVI--DAGLLPKIVENLAKGEFQTQKEAAWAVSN 312
+ + ++ GL P + + + + A W +SN
Sbjct: 196 PKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSN 233
Score = 47.6 bits (108), Expect = 8e-06
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Frame = +1
Query: 28 VQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLS-HQKEKICKEAVWFLSNITAG-- 198
V+ A+ A+GN+ + + +VL L L+ H K + + A W LSN G
Sbjct: 180 VREQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKP 239
Query: 199 --NKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
N +QV+ + A L +++ + + + +A WA+S LS GT +++ A+I GV P
Sbjct: 240 QPNFEQVKPALSA--LQRLIHS---QDEEVLTDACWALSYLS-DGTNDKIQAVIESGVFP 293
Query: 373 PFCNLLSCKDTQVINVVLDGLSNML 447
LL V+ L + N++
Sbjct: 294 RLVELLMHPSASVLIPALRTVGNIV 318
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 146 bits (353), Expect = 2e-35
Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 10/207 (4%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVL-NCDALSH-FPALLSHQKEKICKEAVWFLS 183
SH V ALR +GNIVTG D QTQ ++ + AL F L + QK+ + +EA W +S
Sbjct: 293 SHPSPVVLIPALRTVGNIVTGDDAQTQCIVGHPQALPCLFNLLTTTQKKSVKREACWTIS 352
Query: 184 NITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCG 363
NITAG K+Q+QAVID+ ++ ++ L EF +KEA WA+SN + GT Q+ L++ G
Sbjct: 353 NITAGTKEQIQAVIDSNIIAPLLHLLQHAEFDVKKEAVWAISNATSGGTFNQIEYLVSQG 412
Query: 364 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGE--------NADQVANIIEECGGIDQIE 519
I P C+LL +D++ + L+ L N+L++ GE N + +++E G+D+IE
Sbjct: 413 CIKPLCDLLVHQDSKTVLTCLEALDNILRV-GEAKKNLGACNMNIFVPMVDEADGLDKIE 471
Query: 520 ALQSHEKVEIFKMAYDIFEQYFGGDEE 600
LQ+H+ VEI+ A + E Y+ +++
Sbjct: 472 DLQNHDNVEIYNKAVYVLESYWVQEDD 498
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 94 VLNCDALSHFPALLSHQK-EKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKG 270
V+ L F L+ ++ ++ EA W L+NI +G AVI+ G +P V+ L+
Sbjct: 114 VIRSGVLPRFVEFLTREEYPQLQFEAAWALTNIASGTAANTMAVIEHGAVPIFVKLLS-- 171
Query: 271 EFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
+++A WA+ N++ TK + L++ ++P
Sbjct: 172 --SPREDAVWALGNVAGDSTKCRNLVLMHGAMLP 203
Score = 41.1 bits (92), Expect = 7e-04
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 1/171 (0%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
++Q A A+ NI +GT T V+ A+ F LLS +E +AVW L N+ +
Sbjct: 134 QLQFEAAWALTNIASGTAANTMAVIEHGAVPIFVKLLSSPRE----DAVWALGNVAGDST 189
Query: 205 QQVQAVIDAG-LLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFC 381
+ V+ G +LP + + + + +AW +SN K Q +P
Sbjct: 190 KCRNLVLMHGAMLPLLQQLNEHAKLSMLRNSAWTLSNFCRG--KPQPDFKHVEPALPVLR 247
Query: 382 NLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSH 534
L+ +D +++ LS + + +N V E G D + L SH
Sbjct: 248 ELILSQDEEILTDSCWALSYLSDGSNDNIQAVI----ETGVCDWLVELLSH 294
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Frame = +1
Query: 109 ALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQK 288
AL L+ Q E+I ++ W LS ++ G+ +QAVI+ G+ +VE L+
Sbjct: 242 ALPVLRELILSQDEEILTDSCWALSYLSDGSNDNIQAVIETGVCDWLVELLSHPSPVVLI 301
Query: 289 EAAWAVSNLSVSGTKEQVGALI-NCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGEN 465
A V N+ V+G Q ++ + +P NLL+ TQ +V + + +
Sbjct: 302 PALRTVGNI-VTGDDAQTQCIVGHPQALPCLFNLLT--TTQKKSVKREACWTISNITAGT 358
Query: 466 ADQVANIIEECGGIDQIEALQSHEKVEIFKMA 561
+Q+ +I+ I + L H + ++ K A
Sbjct: 359 KEQIQAVIDS-NIIAPLLHLLQHAEFDVKKEA 389
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 124 bits (299), Expect = 6e-29
Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 8/204 (3%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEK-ICKEAVWFLSNI 189
H + + + I +G D Q QV++ D L++ LL+ K I K+A +SNI
Sbjct: 331 HASANILLPVITVLARISSGDDAQVQVLVENDILNYLAPLLARNYPKSIKKQACLIVSNI 390
Query: 190 TAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVI 369
+ G+K +QAVIDA ++ ++ L E ++EAAWA+SN + G+ +Q+ L++ G +
Sbjct: 391 STGSKDNIQAVIDADVISPLIFLLKTSEKDIKEEAAWAISNAASGGSNDQIQYLVSRGCL 450
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLKMA-------GENADQVANIIEECGGIDQIEALQ 528
P CN+L+ +D ++ L+GL N+L+ G + A I ECGG+D++E LQ
Sbjct: 451 EPLCNVLTYQDADLVYACLEGLQNILQAGAVGKQGQGSTVNPYAQFILECGGLDKLEDLQ 510
Query: 529 SHEKVEIFKMAYDIFEQYFGGDEE 600
+ I+K+ + E Y+ DEE
Sbjct: 511 EVDNDAIYKLVMKLLEGYW--DEE 532
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
K+ A A+ I G + Q VL+ A LL H I + L+ I++G+
Sbjct: 293 KILGDACWALCYICDGVSDGIQHVLDAGACPQLVNLLMHASANILLPVITVLARISSGDD 352
Query: 205 QQVQAVIDAGLLPKIVENLAKGEFQT-QKEAAWAVSNLSVSGTKEQVGALINCGVIPPFC 381
QVQ +++ +L + LA+ ++ +K+A VSN+S +G+K+ + A+I+ VI P
Sbjct: 353 AQVQVLVENDILNYLAPLLARNYPKSIKKQACLIVSNIS-TGSKDNIQAVIDADVISPLI 411
Query: 382 NLLSCKDTQVINVVLDGLSNMLKMAGENADQVANII 489
LL + + +SN +G + DQ+ ++
Sbjct: 412 FLLKTSEKDIKEEAAWAISN--AASGGSNDQIQYLV 445
Score = 44.4 bits (100), Expect = 7e-05
Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 1/196 (0%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H+ ++Q A + NI + T +V C A+ LL I +A+W L NI
Sbjct: 166 HEHPQLQMEAAWVLTNIAAS--DYTLLVAECGAVPRLVELLESANANIRHQAIWALGNIA 223
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKG-EFQTQKEAAWAVSNLSVSGTKEQVGALINCGVI 369
A + V+D G + ++ +G + + A WA+SNL +V ++
Sbjct: 224 ADVPTCREIVLDHGAVTPLLAQFREGMKVPVLRTATWALSNLCFGKLPAEVQVK---PIL 280
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVEI 549
L+ D +++ D + + +D + +++ + G Q+ L H I
Sbjct: 281 DIISQLIHSVDEKILG---DACWALCYICDGVSDGIQHVL-DAGACPQLVNLLMHASANI 336
Query: 550 FKMAYDIFEQYFGGDE 597
+ + GD+
Sbjct: 337 LLPVITVLARISSGDD 352
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +1
Query: 19 EVKVQTAALRAIGNIVTGT-DEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITA 195
+V V A A+ N+ G + QV D +S L+ EKI +A W L I
Sbjct: 251 KVPVLRTATWALSNLCFGKLPAEVQVKPILDIISQ---LIHSVDEKILGDACWALCYICD 307
Query: 196 GNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPP 375
G +Q V+DAG P++V L ++ +S SG QV L+ ++
Sbjct: 308 GVSDGIQHVLDAGACPQLVNLLMHASANILLPVITVLARIS-SGDDAQVQVLVENDILNY 366
Query: 376 FCNLLS 393
LL+
Sbjct: 367 LAPLLA 372
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 75.8 bits (178), Expect = 3e-14
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Frame = +1
Query: 28 VQTAALRAIGNIVTGTDEQTQVVLNC------DALSHFPALLSHQKEKICKEAVWFLSNI 189
+ LR +GN++ D VL ALS L + KE+ W LSNI
Sbjct: 298 ISLIVLRGLGNLIAADDYMVDSVLTVGHNIIDQALSGLIKCLKSDNRVLRKESSWALSNI 357
Query: 190 TAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGT---------KEQV 342
AG+ + + + + P ++ + +F ++EAA+ + NL V T E +
Sbjct: 358 AAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTLGNLCVVPTGNCELPKIIVEHL 417
Query: 343 GALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEA 522
A+++ G +P F +L+ D + L L L M G Q ++E GI+ +E
Sbjct: 418 VAIVDGGALPGFIHLVRSADVDTAGLGLQFLE--LVMRGYPNKQGPKLVEMEDGIEAMER 475
Query: 523 LQSHEKVEIFKMAYDIFEQYFGGD 594
Q HE ++ MA + ++YFG D
Sbjct: 476 FQFHENEQMRNMANGLVDEYFGED 499
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = +1
Query: 49 AIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAG--NKQQVQAV 222
AIGN+ E +L AL L+ K + A W +SN+ G K + +
Sbjct: 200 AIGNVAGEGAELRSTLLAQGALRPLTRLMFSSKGSTARTAAWAMSNLIKGPDPKAANELI 259
Query: 223 IDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKD 402
G+L I+ +L K + + E AW V LS + I+ V+ NL++ D
Sbjct: 260 TIDGVLNAIIASLEKEDEELATEVAWVVVYLSALSDRG-----ISLIVLRGLGNLIAADD 314
Query: 403 TQVINVVLDG 432
V +V+ G
Sbjct: 315 YMVDSVLTVG 324
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Frame = +1
Query: 58 NIVTGTDEQTQVVLNCDALSHFPALLSHQKEK----ICKEAVWFLSNITAGNKQQVQAVI 225
NI G E+T+ +L P L++H EK + ++ W + N+ + ++
Sbjct: 162 NIAAGEPEETKSLLPA-----LPLLIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLL 216
Query: 226 DAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINC-GVIPPFCNLLSCKD 402
G L + + + T + AAWA+SNL + LI GV+ L +D
Sbjct: 217 AQGALRPLTRLMFSSKGSTARTAAWAMSNLIKGPDPKAANELITIDGVLNAIIASLEKED 276
Query: 403 TQVINVV 423
++ V
Sbjct: 277 EELATEV 283
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/132 (24%), Positives = 65/132 (49%)
Frame = +1
Query: 16 KEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITA 195
+++KVQ AA A+ + DE +++C+AL +L + I EAV + N+
Sbjct: 248 QDLKVQRAAAGALRTLAFKNDENKSQIVDCNALPTLILMLRSEDAAIHYEAVGVIGNLVH 307
Query: 196 GNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPP 375
+ + V++AG L ++ L+ ++Q+EAA + + + + +V ++ G + P
Sbjct: 308 SSPNIKKEVLNAGALQPVIGLLSSCCTESQREAALLLGQFASADSDCKV-HIVQRGAVRP 366
Query: 376 FCNLLSCKDTQV 411
+L D Q+
Sbjct: 367 LIEMLQSADVQL 378
Score = 43.6 bits (98), Expect = 1e-04
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Frame = +1
Query: 16 KEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITA 195
++ + A+ IGN+V + + VLN AL LLS + +EA L +
Sbjct: 290 EDAAIHYEAVGVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCTESQREAALLLGQFAS 349
Query: 196 GNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLS-----VS-GTKEQVGALIN 357
+ ++ G + ++E L + Q ++ +A+A+ L+ VS T Q G N
Sbjct: 350 ADSDCKVHIVQRGAVRPLIEMLQSADVQLREMSAFALGRLAQRSSFVSQDTHNQAGIAYN 409
Query: 358 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIE 519
G++ P LL K+ + + L + +N D V++ I + GG+ +++
Sbjct: 410 GGLV-PLLKLLDSKNGSLQHNAAFALYGV----ADNEDYVSDFI-KVGGVQKLQ 457
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 130 LLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVS 309
LLS + + AV L N++ + +++D+ +PKIVE L G +T++ AA +
Sbjct: 373 LLSSSDPRTQEHAVTALLNLSIHENNKA-SIVDSHAIPKIVEVLKTGSMETRENAAATLF 431
Query: 310 NLS-VSGTKEQVGALINCGVIPPFCNLL 390
+LS V K +GA G IPP NLL
Sbjct: 432 SLSVVDENKVTIGA---AGAIPPLINLL 456
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +1
Query: 220 VIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ +AG +P +V L+ + +TQ+ A A+ NLS+ + ++++ IP +L
Sbjct: 361 IAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIH--ENNKASIVDSHAIPKIVEVL 415
>07_03_1062 + 23668334-23669644,23670676-23670764,23671494-23671584
Length = 496
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +1
Query: 124 PAL--LSHQKEKICKE-AVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEA 294
PAL L + + +E AV L N++ + + A+ AG + +V L G ++ A
Sbjct: 215 PALVPLLRSTDPVAQESAVTALLNLSLEERNR-SAITAAGAIKPLVYALRTGTASAKQNA 273
Query: 295 AWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQ 408
A A+ LS+SG +E + CG IPP LLS T+
Sbjct: 274 ACAL--LSLSGIEENRATIGACGAIPPLVALLSAGSTR 309
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/103 (23%), Positives = 50/103 (48%)
Frame = +1
Query: 64 VTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLP 243
++G +E + C A+ ALLS + K+A+ L + + + + +AV AG +
Sbjct: 280 LSGIEENRATIGACGAIPPLVALLSAGSTRGKKDALTTLYRLCSARRNKERAV-SAGAVV 338
Query: 244 KIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
++ + + T ++A ++ S++G E A++ G IP
Sbjct: 339 PLIHLVGERGSGTSEKAMVVLA--SLAGIVEGRDAVVEAGGIP 379
>11_06_0506 -
24380469-24380632,24381737-24383893,24384488-24384541,
24384543-24384597,24384914-24384916,24385192-24385231,
24385576-24385632,24388124-24388412,24389764-24389771,
24390633-24390688,24391207-24391488,24391651-24391811,
24391887-24392121,24392860-24392943,24393022-24393117,
24393333-24394055,24396523-24396987
Length = 1642
Score = 36.7 bits (81), Expect = 0.014
Identities = 40/158 (25%), Positives = 64/158 (40%)
Frame = +1
Query: 7 GSHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSN 186
G+ VQ AA A+G+ G D+ + VL A++H LL+H EK+ + L
Sbjct: 109 GASPAALVQAAA--AVGSFACGVDDGVRAVLAAGAVAHLTRLLAHPDEKVVDASARALRM 166
Query: 187 ITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGV 366
I V + + + L E + E A + + S T EQ+ AL GV
Sbjct: 167 IYQSKLAPKFDVNNNEKNMEFLLTLLNSENENVTELAANIISHSCDSTTEQL-ALCAAGV 225
Query: 367 IPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVA 480
N + + LD L+ +++ E A + A
Sbjct: 226 PQRLVNHFG-GSMNLRDACLDSLTAIIRNNWEVASRFA 262
>06_01_0844 -
6411121-6411129,6411671-6411796,6411980-6412043,
6412568-6412695,6412855-6412971,6414936-6415475,
6415554-6417344,6418359-6421407,6421765-6421823,
6422738-6422791
Length = 1978
Score = 34.7 bits (76), Expect = 0.058
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +1
Query: 220 VIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINC--GVIPPFCNLL- 390
V+ G +P ++ L ++Q AA + +S G ++ VG+ I V+P L
Sbjct: 132 VLLGGCIPPLLALLRSKSAESQTAAAKTIYAVSQGGIRDHVGSKIFSTENVVPVLWEQLK 191
Query: 391 -SCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGID 510
S K+ +++ +L G LK +N D + +CGG+D
Sbjct: 192 VSLKNESLVDGLLTGA---LKNLSKNTDGFWSATVQCGGVD 229
>01_05_0162 +
18759647-18759663,18760128-18760131,18760270-18760617,
18760801-18761016,18763367-18763435,18763560-18764209,
18764993-18765089,18765170-18765223,18765305-18765435,
18766818-18767008,18767937-18768574
Length = 804
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +1
Query: 220 VIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
++ +G+L ++V L + + ++ AA +SNL++S + GAL+ GVIP
Sbjct: 145 ILSSGMLTRMVRFLDDEDIKVKEAAAGIISNLALSHSNH--GALVEAGVIP 193
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/57 (26%), Positives = 34/57 (59%)
Frame = +1
Query: 220 VIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ +AG +P ++ L+ + +TQ+ A A+ NLS+ ++ ++I+ G +P ++L
Sbjct: 437 IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIH--EDNKASIISSGAVPSIVHVL 491
>03_02_0538 +
9299639-9300046,9300362-9300509,9300648-9300652,
9302886-9303290,9303379-9304608
Length = 731
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +1
Query: 160 KEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQ 339
+EA L + + + + DAG +P +V L+ + TQ+ A+ NLS+ +E
Sbjct: 411 REAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSITDVSTQEHVVTALLNLSI--YEEN 468
Query: 340 VGALINCGVIPPFCNLL 390
+I G +P ++L
Sbjct: 469 KARIITSGAVPGVVHVL 485
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEA-VWFLSN 186
+ K + ++ AAL I N+ ++ + L+ F ++S K A + LSN
Sbjct: 353 TEKNIDIKIAALNFISNLSKDASQELAEQIRDTHLNIFVKIISSPTSGNEKAAAIGILSN 412
Query: 187 ITAGNKQQVQAVIDAGLLPKIVENL 261
+ +K+ + + +A LLP ++ L
Sbjct: 413 LPVTDKKITELLTEANLLPLLISLL 437
>07_01_0368 +
2739908-2740320,2740437-2740816,2740893-2740977,
2741053-2741167,2741493-2741615
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 202 KQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVS 324
++Q + IDAG PKIV L KG F+ +++ NL+VS
Sbjct: 310 EEQYRECIDAGFRPKIVPILKKGMFRVLNFGFFSL-NLAVS 349
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFP 126
K+ ++ + ++T T EQ + LNC A H P
Sbjct: 705 KLNAESVATVNGLITTTVEQIKAALNCSAHGHHP 738
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +1
Query: 235 LLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQVI 414
L PK E LA E K W V ++ + G L+ CGVI C L +I
Sbjct: 502 LQPK--EKLAASELPDSKTKKWRVVSIIIGGF-----ILLVCGVITCICFLRKRTMKAII 554
Query: 415 NVVLDGLSNMLK 450
+ +DG LK
Sbjct: 555 PIAVDGHLTTLK 566
>02_05_0375 + 28387091-28387597
Length = 168
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 343 RLVPWCR*RSGWRRPTQPPSESGT-RPWPGSPLSWA 239
RL P C R WRR + G R W P SWA
Sbjct: 101 RLSPPCTVRHLWRRREEERKRQGRQRRWADEPFSWA 136
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 399 RHASH*RCVGRVEQHAEDGRGERGPSGQHHRGVRGNRPDRGAAEPRESRN 548
R H R R G G RG S +H R G R G + PR +R+
Sbjct: 184 RRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGRRRHGGSPPRRARS 233
>09_06_0089 +
20781086-20782985,20783463-20783538,20783593-20783669,
20784301-20784405,20784601-20784659
Length = 738
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/100 (20%), Positives = 45/100 (45%)
Frame = +1
Query: 40 ALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQA 219
A ++ ++ D +++++ D + L+ K + + A + + + + V+
Sbjct: 165 AAASLVSLARDNDRYSKLIIEEDGVPPLLRLVKEGKLEGQENAALAIG-LLGRDPECVEQ 223
Query: 220 VIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQ 339
++ AG + L +G + Q AWAVS L+ + K Q
Sbjct: 224 MVHAGACTAFAKVLKEGPMKVQATVAWAVSELAANHPKCQ 263
>03_01_0094 +
749906-750204,751238-751357,751452-751521,751701-751811,
752036-752119,752720-752770,752934-752963,753064-753126,
753234-753299,753400-753516,753956-753991,754387-754506,
754644-754814,754983-755076,755394-755503
Length = 513
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 243 QDSGEPGQGRVPDSEGGCVGRLQPER*RHQGTSRGSH 353
+DSGEP GR SEG +G ER SH
Sbjct: 73 KDSGEPSSGRSTLSEGNGIGSAGAERASQDSLQFSSH 109
>11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480
Length = 910
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 310 NLSVSGTKEQVGALINCGVIP---PFCNLLSCKDTQVINVVLDGLSN-MLKMAGENADQV 477
++ +S + E + A++ G I P L+CK +VI V DG + +L GE ++
Sbjct: 557 SIKISNSSESLRAVVTLGNIDIENPEALFLNCKKFRVIQVTEDGFAKVLLDCIGEM--KL 614
Query: 478 ANIIEECGGIDQIEALQSHEKVEIFKM 558
+E G + +E + S+ ++F +
Sbjct: 615 LRHLEFLGHSNAVELVISNSVSKLFNL 641
>11_01_0260 - 1985258-1985794,1986874-1986990
Length = 217
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/65 (35%), Positives = 27/65 (41%)
Frame = +3
Query: 213 AGSHRRRPLAQDSGEPGQGRVPDSEGGCVGRLQPER*RHQGTSRGSHQLRSHTALLQSTQ 392
AG+ +RPL SG VGR ER R +G RGS Q H Q +
Sbjct: 133 AGTEPKRPLLYPSGTAAAALGLWK----VGRQNKERGRGRGRCRGSLQPPVHVVGQQQSS 188
Query: 393 LQRHA 407
RHA
Sbjct: 189 CGRHA 193
>09_04_0419 + 17411172-17411282,17412634-17413788
Length = 421
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 280 SGTRPWPGSPLSWARGRRR*LPALVAYSRLLY*IGTILLLCRSSL 146
+G R G W RGRRR LP+++ +++ IG + LL + L
Sbjct: 18 AGWRVVDGDSTRWRRGRRRPLPSIMV-AKIKRQIGGLSLLAKLGL 61
>03_05_0232 +
22174516-22174768,22175278-22175471,22175557-22175604,
22176707-22176784,22178073-22178145,22178406-22178577,
22179652-22180083,22180209-22180400,22180696-22180771
Length = 505
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 313 GWRRPTQPPSESGTRPWPGSPLSWARGRRR*LPALVAYSRLLY*IGTILLLCRSSLSDEI 134
G+ Q +E T W SP+ W G R L A +S +L ++ LC L++ +
Sbjct: 394 GYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAETV 453
>02_02_0252 +
8323087-8323523,8323929-8324019,8324155-8324281,
8324469-8324623
Length = 269
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 450 DGRGERGPSGQHHRGVRGNRPD-RGAAEP 533
DG GERGP+G+ H G+ D GA P
Sbjct: 92 DGGGERGPAGEAHLMDMGDGDDGMGATSP 120
>01_06_1538 -
38094982-38095149,38095230-38095597,38095960-38096003,
38096430-38096449
Length = 199
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 328 CR*RSGWRRPTQPPSESGTRPWPGSP 251
C + +RP Q +RPWPG P
Sbjct: 28 CNLQEAKKRPRQAAMSGRSRPWPGDP 53
>09_04_0323 -
16679565-16679939,16680328-16680660,16680721-16681032,
16683590-16683825,16683972-16684239
Length = 507
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 461 RTRTKWPTSSRSAGESTRSRRCRATRKSKYLRWRMISLNSTSVETRRTR 607
RT T PT+S G T S R R T +++ RWR+ + + + R R
Sbjct: 336 RTVTDSPTASTRGG--TSSARGRCTTRARCSRWRVFADDGDERQDYRIR 382
>07_03_0284 +
16249497-16249993,16250950-16251069,16251166-16251298,
16251867-16252031,16253289-16253459
Length = 361
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 217 AVIDA-GLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLS 393
AV D G + + NL+K +F+T +A V+ ++ G + CG PP + LS
Sbjct: 246 AVTDQEGASEEDINNLSKFKFRTMGDADKLVAGIAAPVG----GVMTECGTNPPVEHFLS 301
Query: 394 CKDTQ 408
+D +
Sbjct: 302 AEDAE 306
>09_06_0210 - 21597470-21598093
Length = 207
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 316 SGWRRPTQPPSESGTRPWPGSPLSWAR 236
SGWRR PP R W P W R
Sbjct: 85 SGWRRQCLPPDLVDDRRWGLLPDGWLR 111
>01_06_0658 -
30942890-30943054,30943159-30943266,30943448-30943598,
30943683-30943780,30943869-30944020,30944298-30944403,
30944499-30944588,30944668-30944813,30945396-30945695,
30945953-30946038,30947260-30947996
Length = 712
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 160 CRSSLSDEITRLGSVTKHHSSKRP 89
C S+ + I R G V++HHS+K P
Sbjct: 262 CASTRTKYILRYGDVSEHHSTKFP 285
>01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359
Length = 385
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +3
Query: 417 RCVGRVEQHAEDGRGE-----RGPSGQHHRGVRGNRPDRGAAEPRESRNI*DGV*YL*TV 581
RC +++ E+G+GE + G +G + + ++ A +PR + V +L
Sbjct: 118 RCKKEEDENKEEGKGEEDEGHKNKKGSAAKGGKAGKGEKRARQPRFAFMTKSEVDHLEDG 177
Query: 582 LRWRRGGR 605
RWR+ G+
Sbjct: 178 YRWRKYGQ 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,043,401
Number of Sequences: 37544
Number of extensions: 405853
Number of successful extensions: 1618
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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