Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E15
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 266 1e-71
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 266 1e-71
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 266 1e-71
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 136 9e-33
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 136 9e-33
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 136 9e-33
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 78 4e-15
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 78 4e-15
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 57 9e-09
Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 31 0.85
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 1.5
U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical pr... 29 2.0
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 29 2.6
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical pr... 28 6.0
U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like pro... 28 6.0
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical ... 28 6.0
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 27 7.9
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical... 27 7.9
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 266 bits (651), Expect = 1e-71
Identities = 120/196 (61%), Positives = 158/196 (80%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H +VKVQTAALRA+GNIVTGTDEQTQ+VL+ L P LL+H KEKI KEAVWF+SNIT
Sbjct: 288 HVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT 347
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
AGN+QQVQ V DAG++P I+ L +G+F TQKEAAWA+SN+++SG QV ++ GV+
Sbjct: 348 AGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLR 407
Query: 373 PFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVEIF 552
PFC +LSC D+Q+I VVLDG++N+LKMAGE A+QV + IEECGG+D+IE LQ+HE +I+
Sbjct: 408 PFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHENEDIY 467
Query: 553 KMAYDIFEQYFGGDEE 600
K+A++I + +F D+E
Sbjct: 468 KLAFEIIDNFFSSDDE 483
Score = 70.9 bits (166), Expect = 6e-13
Identities = 38/130 (29%), Positives = 69/130 (53%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ + NI
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIV 305
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
G +Q Q V+D+G+L + LA + + KEA W VSN++ +G ++QV + + G++P
Sbjct: 306 TGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAGIMP 364
Query: 373 PFCNLLSCKD 402
+LL D
Sbjct: 365 MIIHLLDRGD 374
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ +I +G+LP +V+ L+ + Q EAAWA++N++ SGT EQ A++N G +P F LL
Sbjct: 101 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 159
Query: 391 SCKDTQVINVVLDGLSNML 447
SC + V + L N++
Sbjct: 160 SCGNLNVCEQSVWALGNII 178
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
S + +Q A A+ NI +GT EQTQ V+N A+ F LLS +C+++VW L NI
Sbjct: 118 SSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNI 177
Query: 190 TAGNKQQVQAVIDAGLLPKIVENL-AKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGV 366
++ G+L +++ + + + W + NL A++ +
Sbjct: 178 IGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRT-I 236
Query: 367 IPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQV 477
+P L+ +DT ++ + LS + E+ V
Sbjct: 237 LPALSLLIHHQDTNILIDTVWALSYLTDGGNEHIQMV 273
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%)
Frame = +1
Query: 130 LLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVS 309
L+ HQ I + VW LS +T G + +Q VI+A ++ +V L + + Q A AV
Sbjct: 243 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 302
Query: 310 NLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANII 489
N+ V+GT EQ +++ GV+ LL+ ++ + +SN+ AG N QV ++
Sbjct: 303 NI-VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNI--TAG-NQQQVQDVF 358
Query: 490 E 492
+
Sbjct: 359 D 359
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
+H + K+ A+ + NI G +Q Q V + + LL KEA W +SN+
Sbjct: 329 AHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNV 388
Query: 190 T-AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSN-LSVSG-TKEQVGALI-N 357
T +G QV+ ++ G+L L+ + Q + ++N L ++G EQV + I
Sbjct: 389 TISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEE 448
Query: 358 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENAD 471
CG + NL + ++ + + + + N E +
Sbjct: 449 CGGLDKIENLQNHENEDIYKLAFEIIDNFFSSDDETGN 486
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 266 bits (651), Expect = 1e-71
Identities = 120/196 (61%), Positives = 158/196 (80%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H +VKVQTAALRA+GNIVTGTDEQTQ+VL+ L P LL+H KEKI KEAVWF+SNIT
Sbjct: 288 HVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT 347
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
AGN+QQVQ V DAG++P I+ L +G+F TQKEAAWA+SN+++SG QV ++ GV+
Sbjct: 348 AGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLR 407
Query: 373 PFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVEIF 552
PFC +LSC D+Q+I VVLDG++N+LKMAGE A+QV + IEECGG+D+IE LQ+HE +I+
Sbjct: 408 PFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHENEDIY 467
Query: 553 KMAYDIFEQYFGGDEE 600
K+A++I + +F D+E
Sbjct: 468 KLAFEIIDNFFSSDDE 483
Score = 70.9 bits (166), Expect = 6e-13
Identities = 38/130 (29%), Positives = 69/130 (53%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ + NI
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIV 305
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
G +Q Q V+D+G+L + LA + + KEA W VSN++ +G ++QV + + G++P
Sbjct: 306 TGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAGIMP 364
Query: 373 PFCNLLSCKD 402
+LL D
Sbjct: 365 MIIHLLDRGD 374
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ +I +G+LP +V+ L+ + Q EAAWA++N++ SGT EQ A++N G +P F LL
Sbjct: 101 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 159
Query: 391 SCKDTQVINVVLDGLSNML 447
SC + V + L N++
Sbjct: 160 SCGNLNVCEQSVWALGNII 178
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
S + +Q A A+ NI +GT EQTQ V+N A+ F LLS +C+++VW L NI
Sbjct: 118 SSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNI 177
Query: 190 TAGNKQQVQAVIDAGLLPKIVENL-AKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGV 366
++ G+L +++ + + + W + NL A++ +
Sbjct: 178 IGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRT-I 236
Query: 367 IPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQV 477
+P L+ +DT ++ + LS + E+ V
Sbjct: 237 LPALSLLIHHQDTNILIDTVWALSYLTDGGNEHIQMV 273
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%)
Frame = +1
Query: 130 LLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVS 309
L+ HQ I + VW LS +T G + +Q VI+A ++ +V L + + Q A AV
Sbjct: 243 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 302
Query: 310 NLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANII 489
N+ V+GT EQ +++ GV+ LL+ ++ + +SN+ AG N QV ++
Sbjct: 303 NI-VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNI--TAG-NQQQVQDVF 358
Query: 490 E 492
+
Sbjct: 359 D 359
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
+H + K+ A+ + NI G +Q Q V + + LL KEA W +SN+
Sbjct: 329 AHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNV 388
Query: 190 T-AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSN-LSVSG-TKEQVGALI-N 357
T +G QV+ ++ G+L L+ + Q + ++N L ++G EQV + I
Sbjct: 389 TISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEE 448
Query: 358 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENAD 471
CG + NL + ++ + + + + N E +
Sbjct: 449 CGGLDKIENLQNHENEDIYKLAFEIIDNFFSSDDETGN 486
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 266 bits (651), Expect = 1e-71
Identities = 120/196 (61%), Positives = 158/196 (80%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H +VKVQTAALRA+GNIVTGTDEQTQ+VL+ L P LL+H KEKI KEAVWF+SNIT
Sbjct: 197 HVDVKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT 256
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
AGN+QQVQ V DAG++P I+ L +G+F TQKEAAWA+SN+++SG QV ++ GV+
Sbjct: 257 AGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNVTISGRPNQVEQMVKLGVLR 316
Query: 373 PFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVEIF 552
PFC +LSC D+Q+I VVLDG++N+LKMAGE A+QV + IEECGG+D+IE LQ+HE +I+
Sbjct: 317 PFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEECGGLDKIENLQNHENEDIY 376
Query: 553 KMAYDIFEQYFGGDEE 600
K+A++I + +F D+E
Sbjct: 377 KLAFEIIDNFFSSDDE 392
Score = 70.9 bits (166), Expect = 6e-13
Identities = 38/130 (29%), Positives = 69/130 (53%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H++ + + A+ + G +E Q+V+ ++H LL H K+ A+ + NI
Sbjct: 155 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIV 214
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIP 372
G +Q Q V+D+G+L + LA + + KEA W VSN++ +G ++QV + + G++P
Sbjct: 215 TGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNIT-AGNQQQVQDVFDAGIMP 273
Query: 373 PFCNLLSCKD 402
+LL D
Sbjct: 274 MIIHLLDRGD 283
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ +I +G+LP +V+ L+ + Q EAAWA++N++ SGT EQ A++N G +P F LL
Sbjct: 10 IDDLIGSGILPVLVQCLSSTDPNLQFEAAWALTNIA-SGTSEQTQAVVNAGAVPLFLQLL 68
Query: 391 SCKDTQVINVVLDGLSNML 447
SC + V + L N++
Sbjct: 69 SCGNLNVCEQSVWALGNII 87
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
S + +Q A A+ NI +GT EQTQ V+N A+ F LLS +C+++VW L NI
Sbjct: 27 SSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNI 86
Query: 190 TAGNKQQVQAVIDAGLLPKIVENL-AKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGV 366
++ G+L +++ + + + W + NL A++ +
Sbjct: 87 IGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRT-I 145
Query: 367 IPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQV 477
+P L+ +DT ++ + LS + E+ V
Sbjct: 146 LPALSLLIHHQDTNILIDTVWALSYLTDGGNEHIQMV 182
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/121 (30%), Positives = 63/121 (52%)
Frame = +1
Query: 130 LLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVS 309
L+ HQ I + VW LS +T G + +Q VI+A ++ +V L + + Q A AV
Sbjct: 152 LIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVG 211
Query: 310 NLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANII 489
N+ V+GT EQ +++ GV+ LL+ ++ + +SN+ AG N QV ++
Sbjct: 212 NI-VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNI--TAG-NQQQVQDVF 267
Query: 490 E 492
+
Sbjct: 268 D 268
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Frame = +1
Query: 10 SHKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNI 189
+H + K+ A+ + NI G +Q Q V + + LL KEA W +SN+
Sbjct: 238 AHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQKEAAWAISNV 297
Query: 190 T-AGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSN-LSVSG-TKEQVGALI-N 357
T +G QV+ ++ G+L L+ + Q + ++N L ++G EQV + I
Sbjct: 298 TISGRPNQVEQMVKLGVLRPFCAMLSCTDSQIIQVVLDGINNILKMAGEAAEQVTSEIEE 357
Query: 358 CGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENAD 471
CG + NL + ++ + + + + N E +
Sbjct: 358 CGGLDKIENLQNHENEDIYKLAFEIIDNFFSSDDETGN 395
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 136 bits (330), Expect = 9e-33
Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Frame = +1
Query: 40 ALRAIGNIVTGTDEQTQVVLNCDALSHF-PALLSHQKEKICKEAVWFLSNITAGNKQQVQ 216
ALR +GN+ TG D TQ V++ +L P + + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 217 AVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSC 396
AV+DA LLP ++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 397 KDTQVINVVLDGLSNMLKMA----GENADQVANIIEECGGIDQIEALQSHEKVEIFKMAY 564
+T ++N L+ L ++ D + + +EE GG+D +E LQ + +I+ AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 565 DIFEQYFGGDE 597
I Q+F D+
Sbjct: 502 RIITQFFTDDD 512
Score = 70.9 bits (166), Expect = 6e-13
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H + +V+ A A+ + G DEQ ++ L H A + E + A+ L N+
Sbjct: 272 HTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFK-EAENLVAPALRTLGNVA 330
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQT-QKEAAWAVSNLSVSGTKEQVGALINCGVI 369
GN QAVID G L +I+ + K + KE W VSN+ ++GT++Q+ A+++ ++
Sbjct: 331 TGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVLDANLL 389
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVA 480
P N+L D + LSN L G N VA
Sbjct: 390 PVLINVLKSGDHKCQFEASWALSN-LAQGGTNRQVVA 425
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/112 (32%), Positives = 63/112 (56%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ VI GLL +V+ L+ + Q EAAWA++N+ VSG+ EQ A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 391 SCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVE 546
+ Q+ L ++N +AG+++ Q+ + + +C G++ + L EKV+
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHLM--EKVD 229
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 94 VLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGE 273
V++C L LS + E++ EA W L+NI +G+ +Q A ++AG+ ++
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 274 FQTQKEAAWAVSNLSVSGTKEQV-GALINCGVIPPFCNLLSCKD 402
Q ++A WAV+N ++G Q+ +I C + +L+ D
Sbjct: 188 AQISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 47.2 bits (107), Expect = 9e-06
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNC---DALSHFPALLSHQKEKICKEAVWFLS 183
H+ ++ AL A+ NI + + V+ C +AL H + + + W S
Sbjct: 185 HQSAQISEQALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFS 244
Query: 184 NITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCG 363
N+ + L +V+ + + Q +++A WAVS L+ G EQ+ G
Sbjct: 245 NMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYLT-DGPDEQIELARESG 303
Query: 364 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQI 516
V+P K+ + N+V L + +A N D + + + G +D+I
Sbjct: 304 VLPHVVAFF--KEAE--NLVAPALRTLGNVATGN-DSLTQAVIDLGSLDEI 349
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
+VQ A A+ NIV+G+ EQT + L HQ +I ++A+W ++NI +
Sbjct: 147 RVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSS 206
Query: 205 QQVQAVIDA-GL--LPKIVENLAKGEFQTQKEAAWAVSNL 315
Q VI G+ L ++E + + + AWA SN+
Sbjct: 207 QLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNM 246
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 136 bits (330), Expect = 9e-33
Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Frame = +1
Query: 40 ALRAIGNIVTGTDEQTQVVLNCDALSHF-PALLSHQKEKICKEAVWFLSNITAGNKQQVQ 216
ALR +GN+ TG D TQ V++ +L P + + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 217 AVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSC 396
AV+DA LLP ++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 397 KDTQVINVVLDGLSNMLKMA----GENADQVANIIEECGGIDQIEALQSHEKVEIFKMAY 564
+T ++N L+ L ++ D + + +EE GG+D +E LQ + +I+ AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 565 DIFEQYFGGDE 597
I Q+F D+
Sbjct: 502 RIITQFFTDDD 512
Score = 70.9 bits (166), Expect = 6e-13
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H + +V+ A A+ + G DEQ ++ L H A + E + A+ L N+
Sbjct: 272 HTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFK-EAENLVAPALRTLGNVA 330
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQT-QKEAAWAVSNLSVSGTKEQVGALINCGVI 369
GN QAVID G L +I+ + K + KE W VSN+ ++GT++Q+ A+++ ++
Sbjct: 331 TGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVLDANLL 389
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVA 480
P N+L D + LSN L G N VA
Sbjct: 390 PVLINVLKSGDHKCQFEASWALSN-LAQGGTNRQVVA 425
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/112 (32%), Positives = 63/112 (56%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ VI GLL +V+ L+ + Q EAAWA++N+ VSG+ EQ A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 391 SCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVE 546
+ Q+ L ++N +AG+++ Q+ + + +C G++ + L EKV+
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHLM--EKVD 229
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 94 VLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGE 273
V++C L LS + E++ EA W L+NI +G+ +Q A ++AG+ ++
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 274 FQTQKEAAWAVSNLSVSGTKEQV-GALINCGVIPPFCNLLSCKD 402
Q ++A WAV+N ++G Q+ +I C + +L+ D
Sbjct: 188 AQISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 47.2 bits (107), Expect = 9e-06
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNC---DALSHFPALLSHQKEKICKEAVWFLS 183
H+ ++ AL A+ NI + + V+ C +AL H + + + W S
Sbjct: 185 HQSAQISEQALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFS 244
Query: 184 NITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCG 363
N+ + L +V+ + + Q +++A WAVS L+ G EQ+ G
Sbjct: 245 NMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYLT-DGPDEQIELARESG 303
Query: 364 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQI 516
V+P K+ + N+V L + +A N D + + + G +D+I
Sbjct: 304 VLPHVVAFF--KEAE--NLVAPALRTLGNVATGN-DSLTQAVIDLGSLDEI 349
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
+VQ A A+ NIV+G+ EQT + L HQ +I ++A+W ++NI +
Sbjct: 147 RVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSS 206
Query: 205 QQVQAVIDA-GL--LPKIVENLAKGEFQTQKEAAWAVSNL 315
Q VI G+ L ++E + + + AWA SN+
Sbjct: 207 QLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNM 246
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 136 bits (330), Expect = 9e-33
Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Frame = +1
Query: 40 ALRAIGNIVTGTDEQTQVVLNCDALSHF-PALLSHQKEKICKEAVWFLSNITAGNKQQVQ 216
ALR +GN+ TG D TQ V++ +L P + + I KE W +SNI AG ++Q+Q
Sbjct: 322 ALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQ 381
Query: 217 AVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSC 396
AV+DA LLP ++ L G+ + Q EA+WA+SNL+ GT QV A++ V+P C L
Sbjct: 382 AVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQ 441
Query: 397 KDTQVINVVLDGLSNMLKMA----GENADQVANIIEECGGIDQIEALQSHEKVEIFKMAY 564
+T ++N L+ L ++ D + + +EE GG+D +E LQ + +I+ AY
Sbjct: 442 TNTDMLNNTLETLYTLMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAY 501
Query: 565 DIFEQYFGGDE 597
I Q+F D+
Sbjct: 502 RIITQFFTDDD 512
Score = 70.9 bits (166), Expect = 6e-13
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNIT 192
H + +V+ A A+ + G DEQ ++ L H A + E + A+ L N+
Sbjct: 272 HTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFK-EAENLVAPALRTLGNVA 330
Query: 193 AGNKQQVQAVIDAGLLPKIVENLAKGEFQT-QKEAAWAVSNLSVSGTKEQVGALINCGVI 369
GN QAVID G L +I+ + K + KE W VSN+ ++GT++Q+ A+++ ++
Sbjct: 331 TGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNI-IAGTQKQIQAVLDANLL 389
Query: 370 PPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVA 480
P N+L D + LSN L G N VA
Sbjct: 390 PVLINVLKSGDHKCQFEASWALSN-LAQGGTNRQVVA 425
Score = 53.2 bits (122), Expect = 1e-07
Identities = 36/112 (32%), Positives = 63/112 (56%)
Frame = +1
Query: 211 VQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
+ VI GLL +V+ L+ + Q EAAWA++N+ VSG+ EQ A + GV P +L
Sbjct: 125 IDEVIHCGLLQALVQALSVENERVQYEAAWALTNI-VSGSTEQTIAAVEAGVTIPLIHLS 183
Query: 391 SCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVE 546
+ Q+ L ++N +AG+++ Q+ + + +C G++ + L EKV+
Sbjct: 184 VHQSAQISEQALWAVAN---IAGDSS-QLRDYVIKCHGVEALMHLM--EKVD 229
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 94 VLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGE 273
V++C L LS + E++ EA W L+NI +G+ +Q A ++AG+ ++
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 274 FQTQKEAAWAVSNLSVSGTKEQV-GALINCGVIPPFCNLLSCKD 402
Q ++A WAV+N ++G Q+ +I C + +L+ D
Sbjct: 188 AQISEQALWAVAN--IAGDSSQLRDYVIKCHGVEALMHLMEKVD 229
Score = 47.2 bits (107), Expect = 9e-06
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +1
Query: 13 HKEVKVQTAALRAIGNIVTGTDEQTQVVLNC---DALSHFPALLSHQKEKICKEAVWFLS 183
H+ ++ AL A+ NI + + V+ C +AL H + + + W S
Sbjct: 185 HQSAQISEQALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFS 244
Query: 184 NITAGNKQQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCG 363
N+ + L +V+ + + Q +++A WAVS L+ G EQ+ G
Sbjct: 245 NMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYLT-DGPDEQIELARESG 303
Query: 364 VIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQI 516
V+P K+ + N+V L + +A N D + + + G +D+I
Sbjct: 304 VLPHVVAFF--KEAE--NLVAPALRTLGNVATGN-DSLTQAVIDLGSLDEI 349
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
+VQ A A+ NIV+G+ EQT + L HQ +I ++A+W ++NI +
Sbjct: 147 RVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSS 206
Query: 205 QQVQAVIDA-GL--LPKIVENLAKGEFQTQKEAAWAVSNL 315
Q VI G+ L ++E + + + AWA SN+
Sbjct: 207 QLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNM 246
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 78.2 bits (184), Expect = 4e-15
Identities = 42/189 (22%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Frame = +1
Query: 52 IGNIVTGTDEQTQVVLNCDALSHFPALL--SHQKEKICKEAVWFLSNITAGNKQQVQAVI 225
I +I+ T T+ +++ L + S+ +++C + +SNI +Q + +I
Sbjct: 305 INSIIQATGYFTEEMIDAGLLEVLKGFVNVSYMSQEVC----FIISNICVEGEQTIDKLI 360
Query: 226 DAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKDT 405
+G+L ++ + E+++++EAA+ + + S ++ + ++ G++ F +LL+C D
Sbjct: 361 SSGVLREVARVMEASEYRSRREAAFVICHCCASANQKHLEYVVELGMLSAFTDLLTCMDV 420
Query: 406 QVINVVLDGLSNML-----KMAGENADQVANIIEECGGIDQIEALQSHEKVEIFKMAYDI 570
+++ +LD + +L ++ +N++ VA +EE G +++E L + V+I AY I
Sbjct: 421 SLVSYILDAIYLLLQFGEMRLLPDNSNPVAIKLEEIGCREKLEFLCESQSVDIHARAYTI 480
Query: 571 FEQYFGGDE 597
++++ D+
Sbjct: 481 IDRFYVDDD 489
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 78.2 bits (184), Expect = 4e-15
Identities = 42/189 (22%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Frame = +1
Query: 52 IGNIVTGTDEQTQVVLNCDALSHFPALL--SHQKEKICKEAVWFLSNITAGNKQQVQAVI 225
I +I+ T T+ +++ L + S+ +++C + +SNI +Q + +I
Sbjct: 305 INSIIQATGYFTEEMIDAGLLEVLKGFVNVSYMSQEVC----FIISNICVEGEQTIDKLI 360
Query: 226 DAGLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKDT 405
+G+L ++ + E+++++EAA+ + + S ++ + ++ G++ F +LL+C D
Sbjct: 361 SSGVLREVARVMEASEYRSRREAAFVICHCCASANQKHLEYVVELGMLSAFTDLLTCMDV 420
Query: 406 QVINVVLDGLSNML-----KMAGENADQVANIIEECGGIDQIEALQSHEKVEIFKMAYDI 570
+++ +LD + +L ++ +N++ VA +EE G +++E L + V+I AY I
Sbjct: 421 SLVSYILDAIYLLLQFGEMRLLPDNSNPVAIKLEEIGCREKLEFLCESQSVDIHARAYTI 480
Query: 571 FEQYFGGDE 597
++++ D+
Sbjct: 481 IDRFYVDDD 489
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +1
Query: 37 AALRAIGNIVTGTDEQTQVVLNCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQ 216
+ LR IGNI G D QT ++++ + E EA W +SN+ AG + V
Sbjct: 239 SCLRLIGNIAVGNDVQTDLLVDNPKFRVVMNIAMSSPEHH-SEAAWIISNVVAGAPRHVD 297
Query: 217 AVIDA--GLLPKIVENLAKGEFQTQKEAAWAVSNLSVSGTKEQVGALINCGVIPPFCNLL 390
++D ++ + G+ + +KE W + NL + + Q L++ G++ F LL
Sbjct: 298 YIMDDPDAFYEWVMAGIHTGDKRLRKECLWIIGNLLATADEHQTYLLVSLGIVQHFPALL 357
Query: 391 SCKDTQV 411
D ++
Sbjct: 358 DFDDVRL 364
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 25 KVQTAALRAIGNIVTGTDE-QTQVVLNCDALSHFPALLSHQKEKICKEA 168
+++ L IGN++ DE QT ++++ + HFPALL ++ ++A
Sbjct: 320 RLRKECLWIIGNLLATADEHQTYLLVSLGIVQHFPALLDFDDVRLNEKA 368
>Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical
protein Y53C12A.4 protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 205 QQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNL 315
Q Q V +A +LP ++++L K EF+ +K+ A +NL
Sbjct: 72 QLAQEVYNANVLPMLIKHLHKFEFECKKDVASVFNNL 108
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 30.7 bits (66), Expect = 0.85
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +1
Query: 241 PKIVENLAKG---EFQTQKEAAWAVSNLSVSGTKEQ--VGALINCGVIPPFCNLLSCKDT 405
P+I N K + +TQ+EA AV NLS + +Q V L+N + P + D
Sbjct: 208 PEIAGNSQKAVRIQSETQEEAPVAVKNLSANKMNDQIEVSQLMN-EITPESVPAVESLDN 266
Query: 406 QV-INVVLDGLSNMLKMAGENADQ 474
Q NVV D L+ + K+A + D+
Sbjct: 267 QKNANVVGDLLAKVQKVADDTIDK 290
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/63 (25%), Positives = 20/63 (31%)
Frame = +3
Query: 324 RHQGTSRGSHQLRSHTALLQSTQLQRHASH*RCVGRVEQHAEDGRGERGPSGQHHRGVRG 503
RH G G+H +H T H H H G G P+ H G
Sbjct: 404 RHHGEHHGTHHSPAHHGE-HGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHH 462
Query: 504 NRP 512
+ P
Sbjct: 463 HAP 465
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 389 SRLQKGGMTPQLMRAPTCSLVPLTLRLET 303
S L++ + P + A +LVPLTLRLET
Sbjct: 7 SHLRQADLPPHFIGANETNLVPLTLRLET 35
>U53337-5|AAP40522.1| 377|Caenorhabditis elegans Hypothetical
protein R02E12.2b protein.
Length = 377
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 205 QQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNL 315
Q Q V +A +LP +++ L K EF+ +K+ +NL
Sbjct: 82 QLAQEVYNANILPMLIKMLPKFEFECKKDVGQIFNNL 118
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 205 QQVQAVIDAGLLPKIVENLAKGEFQTQKEAAWAVSNL 315
Q Q V +A +LP +++ L K EF+ +K+ +NL
Sbjct: 341 QLAQEVYNANILPMLIKMLPKFEFECKKDVGQIFNNL 377
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 AWAVSNLSVSGTKEQVGALINCGVIPPFCNLLSCKDTQVINVVLDGLSNMLKMAGEN-AD 471
++ +SNL + G+ A+IN PP C +L+ T+ V +DG K+ G N
Sbjct: 238 SFTISNLGMFGSVTNFTAIIN----PPQCAILTIGGTRSEVVSVDGQLETQKLMGVNLCF 293
Query: 472 QVANIIEEC 498
I EEC
Sbjct: 294 DGRAISEEC 302
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 372 ALLQSTQLQRHASH*RCVGRVEQHAEDGRGERGPSGQHHRGVRGNR 509
AL ++ +L+ H SH GR+ +H + G GQHH + ++
Sbjct: 4 ALRKTRKLRGHVSHGH--GRIGKHRKHPGGRGNAGGQHHHRINRDK 47
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +3
Query: 318 R*RHQGTSRGSHQLRSHTALLQSTQLQRHASH*RCVGRVEQHAEDGRGERGPSGQHHRGV 497
R R + SR RS + + R S + R + D R R PS +
Sbjct: 219 RSRDRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVD 278
Query: 498 RGNRPDRGAAEPRE 539
R P RG+ P E
Sbjct: 279 RSPSPPRGSRSPSE 292
>Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 100 NCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQ 279
NC A HF L + K + ++ + Q +D+G+L K+ ENL E Q
Sbjct: 20 NCPAKDHFIEKLEGLCKTFRKSGEDIVDDVVSVMSNLGQKSVDSGILAKLEENL---EAQ 76
Query: 280 TQK 288
QK
Sbjct: 77 AQK 79
>U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like
protein protein 4 protein.
Length = 123
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 429 RVEQHAEDGRGERGPSGQH--HRGVRGNRPDRGAA 527
R +Q E RG G G HRG GNR RG A
Sbjct: 88 RRQQQREQSRGRGGGRGGRGGHRGGGGNRGGRGGA 122
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/64 (21%), Positives = 33/64 (51%)
Frame = +1
Query: 394 CKDTQVINVVLDGLSNMLKMAGENADQVANIIEECGGIDQIEALQSHEKVEIFKMAYDIF 573
C++ Q++ V+ ++ + +N ++ N+ E C Q E ++S K++I + +
Sbjct: 115 CEENQMMEVLFMCYQTIIDLMAQNTPKIINLNEACALNRQGETIES-LKMKILQKEEEAV 173
Query: 574 EQYF 585
E+ F
Sbjct: 174 EEQF 177
>AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 100 NCDALSHFPALLSHQKEKICKEAVWFLSNITAGNKQQVQAVIDAGLLPKIVENLAKGEFQ 279
NC A HF L + K + ++ + Q +D+G+L K+ ENL E Q
Sbjct: 20 NCPAKDHFIEKLEGLCKTFRKSGEDIVDDVVSVMSNLGQKSVDSGILAKLEENL---EAQ 76
Query: 280 TQK 288
QK
Sbjct: 77 AQK 79
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 508 DQIEALQSHEKVEIFKMAYDIFEQY 582
D+ L SHEK+ IFK+ + ++ ++
Sbjct: 221 DEFRRLPSHEKIAIFKIVWAVWRRF 245
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 103 CDALSHFPALLSHQKEKICKEAVWFLSNITAGNK 204
C ++ F A SH+ EK CKE + + + G +
Sbjct: 307 CTRVAFFSATFSHEVEKWCKENIDEIGMVCVGER 340
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 461 RTRTKWPTSSRSAGESTRSRRCRATRK-SKYLRWRMISLNSTSVETRRTR 607
RTR+ +SSRS S RS R R+ R+ S R R S + RR+R
Sbjct: 139 RTRSGSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRASTAKKTPAKRRSR 188
>AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical
protein Y66D12A.5 protein.
Length = 729
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 461 RTRTKWPTSSRSAGESTRSRRCRATRKSK 547
R RTK P S RS+ +S + + CR + SK
Sbjct: 701 RRRTKNPMSRRSSSQSAQPKICRKFKISK 729
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,674
Number of Sequences: 27780
Number of extensions: 306165
Number of successful extensions: 1123
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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