Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E14
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 407 HINHNNLFSLYIYLRF*NNL*HAKLFIFYN 318
           ++ HN +F    +    +N   +KL I YN
Sbjct: 17  YLQHNQIFGFVTFTCTRSNFRSSKLLILYN 46


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 407 HINHNNLFSLYIYLRF*NNL*HAKLFIFYN 318
           ++ HN +F    +    +N   +KL I YN
Sbjct: 35  YLQHNQIFGFVTFTCTRSNFRSSKLLILYN 64


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 392 NLFSLYIYLRF*NNL*HAKLFIFYNTF 312
           N+F +  +  F  N  H+KL   Y TF
Sbjct: 416 NIFLITPFYNFNENTIHSKLCKLYATF 442


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 2   HEANRTAYI-VRQTKWSVALWPQSGYKNSYI*NAASF 109
           HE    + I +R + W + L P+S    +++ N  S+
Sbjct: 386 HEIRYMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSY 422


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 547 SVTDLQRKVVAA*LSGGLAKQVLENDLA 464
           S  + + K ++A +SGG+A   L  D+A
Sbjct: 167 SALNAKGKTLSAAVSGGIASCKLSYDIA 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,132
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)