Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E14
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL832638-1|CAD89953.1| 1026|Homo sapiens hypothetical protein pr...    31   3.8  
AL832619-1|CAD89961.1| 1026|Homo sapiens hypothetical protein pr...    31   3.8  

>AL832638-1|CAD89953.1| 1026|Homo sapiens hypothetical protein
            protein.
          Length = 1026

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
 Frame = +1

Query: 40   EVVSSFVATV-RL*KFLHIKCS-----IFLSVISKNTNLYK------HHYGGMTSVLDCA 183
            EVV +F  T+ R  +FL  KC      +  S +SK  N  K      H  G   S     
Sbjct: 930  EVVDTFTITMGRYKEFLQGKCGCHFHEVVKSKLSKEYNFIKMKRSRNHIMGRYFSNQSKL 989

Query: 184  HKATDNFCRLPYHVRGPVRE 243
             + T    R PYHVRGP+ +
Sbjct: 990  QQGTVTNFRSPYHVRGPINQ 1009


>AL832619-1|CAD89961.1| 1026|Homo sapiens hypothetical protein
            protein.
          Length = 1026

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
 Frame = +1

Query: 40   EVVSSFVATV-RL*KFLHIKCS-----IFLSVISKNTNLYK------HHYGGMTSVLDCA 183
            EVV +F  T+ R  +FL  KC      +  S +SK  N  K      H  G   S     
Sbjct: 930  EVVDTFTITMGRYKEFLQGKCGCHFHEVVKSKLSKEYNFIKMKRSRNHIMGRYFSNQSKL 989

Query: 184  HKATDNFCRLPYHVRGPVRE 243
             + T    R PYHVRGP+ +
Sbjct: 990  QQGTVTNFRSPYHVRGPINQ 1009


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,338,247
Number of Sequences: 237096
Number of extensions: 1739826
Number of successful extensions: 9683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9683
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)