Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E13
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    20   9.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   9.7  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 368 TKESLHYLNCLVDCNTESK 424
           T ESLHY    VD  T  +
Sbjct: 47  TPESLHYEGRAVDITTSDR 65


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +3

Query: 114 IITKFHYRQVYK*SNVIYLFIYINLEWSPFEKAYFLLTCYNIVSSTKKY 260
           ++  F  R  Y+  + I   +YI  + S F    + +  YN     KKY
Sbjct: 33  VVYSFKRRIFYQDESPISRLVYIGTDLSYFISNVYQILAYNFWK--KKY 79


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 389 GNVMIPLWAFK 357
           GNVM+P+  FK
Sbjct: 85  GNVMVPIVIFK 95


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 389 GNVMIPLWAFK 357
           GNVM+P+  FK
Sbjct: 85  GNVMVPIVIFK 95


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +3

Query: 162 IYLFIYINLEWS 197
           +YLF++++  WS
Sbjct: 8   LYLFLFVHYGWS 19


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 157 MLFIYLFILTWNGVHLKKHTF 219
           + F+Y F L  NG+    HT+
Sbjct: 140 LAFLYSFDLFANGITFGWHTY 160


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 143 YLSVMKLSNNVIYFIICLFILS 78
           Y+ V+ L  NV+ + + LFIL+
Sbjct: 286 YVMVVYLLKNVVLYGLELFILA 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,498
Number of Sequences: 336
Number of extensions: 1983
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)