Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E13
         (462 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.2  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   1.6  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   4.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.5  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   8.5  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.5  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 212 ILFINMLQYCVKYKKIQ 262
           +L+ N+L Y ++YKK+Q
Sbjct: 422 MLYQNILSYFLRYKKLQ 438


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 66  LVSST*NKQTYNKVNNIITKFHYRQVY 146
           ++SS  N   YN  NN     HY   Y
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLHYNINY 340


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 198 PFEKAYFLLTCY 233
           P EKAY L+ CY
Sbjct: 107 PCEKAYQLVKCY 118


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 189 EWSPFEKAYFLL 224
           +W P +K YF L
Sbjct: 420 DWKPLDKCYFCL 431


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 212 ILFINMLQYCVKYKKIQ 262
           +L+  +L Y ++YKK+Q
Sbjct: 422 MLYQKILSYFLRYKKLQ 438


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 345 NAYLKYTGNSNCK*VY 298
           N   KY  N+NCK +Y
Sbjct: 93  NNNYKYNYNNNCKKLY 108


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 117 ITKFHYRQVYK*SNVIYLFIYINLEWSPFEK 209
           +T  H R +     VIY + YI+ ++   EK
Sbjct: 17  VTDIHSRNLTNSLKVIYEWKYIDYDFGSDEK 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,637
Number of Sequences: 438
Number of extensions: 2063
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)