Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E12
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QH39 Cluster: ENSANGP00000019714; n=3; Culicidae|Rep:...    43   0.005
UniRef50_UPI000051A219 Cluster: PREDICTED: similar to CG6958-PA;...    37   0.27 
UniRef50_Q4QC49 Cluster: Putative uncharacterized protein; n=3; ...    34   1.9  
UniRef50_UPI0000EBD51A Cluster: PREDICTED: hypothetical protein;...    34   2.5  
UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4; Bradyrhizobiaceae...    33   4.4  
UniRef50_A1YK77 Cluster: Nup133; n=22; melanogaster subgroup|Rep...    33   4.4  
UniRef50_UPI0000F2E24E Cluster: PREDICTED: hypothetical protein;...    33   5.8  

>UniRef50_Q7QH39 Cluster: ENSANGP00000019714; n=3; Culicidae|Rep:
            ENSANGP00000019714 - Anopheles gambiae str. PEST
          Length = 1147

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +3

Query: 9    GDVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYECLDSA 134
            G++E  LPPLE  L APEL +L       +L+K GYE ++ +
Sbjct: 1102 GELENFLPPLESFLNAPELGDLTQSKSFQYLMKLGYEHINES 1143


>UniRef50_UPI000051A219 Cluster: PREDICTED: similar to CG6958-PA; n=1;
            Apis mellifera|Rep: PREDICTED: similar to CG6958-PA -
            Apis mellifera
          Length = 1123

 Score = 37.1 bits (82), Expect = 0.27
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 9    GDVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
            G+V   LPP++ +L  PEL  L +     FLIK+ YE
Sbjct: 1081 GEVNEFLPPVDMLLVEPELGNLAASSNFQFLIKFVYE 1117


>UniRef50_Q4QC49 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 511

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +2

Query: 77  LRPSGPLPHQVRVRVPRLGAPPPARVAPSPLVYSIRS 187
           L+P+ PLPH  R   P L A  P+ V PSP + S  S
Sbjct: 399 LQPTAPLPHAERPVSPALSAAQPSAVEPSPPLSSSSS 435


>UniRef50_UPI0000EBD51A Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 206

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = +2

Query: 80  RPSGPLPHQVRVRVPRLGAPPPARVAPSP 166
           RP+ P P   R R P L  PPPAR  PSP
Sbjct: 95  RPA-PTPSNSRARAPALPPPPPARPLPSP 122


>UniRef50_Q89KP2 Cluster: Bll4862 protein; n=4;
           Bradyrhizobiaceae|Rep: Bll4862 protein - Bradyrhizobium
           japonicum
          Length = 887

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 80  RPSGPLPHQVRVRVPRLGAPPPARVAP 160
           RP+ P P +V    PR+ APPP R AP
Sbjct: 797 RPTPPPPPRVSAPPPRMAAPPPPRPAP 823


>UniRef50_A1YK77 Cluster: Nup133; n=22; melanogaster subgroup|Rep:
            Nup133 - Drosophila melanogaster (Fruit fly)
          Length = 1200

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 12   DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
            D E +LPP+ED L + EL +L       +L+K  YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186


>UniRef50_UPI0000F2E24E Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 196

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 77  LRPSGPLPHQVRVRVPRLGAPP--PARVAPSPL 169
           LRPSGP P  + +R+P   APP    R AP P+
Sbjct: 31  LRPSGPAPSALGLRLPPASAPPLRSPRSAPFPI 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,750,285
Number of Sequences: 1657284
Number of extensions: 6830409
Number of successful extensions: 24308
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24249
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)