Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E12
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein. 34 0.11
EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein. 34 0.11
EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein. 34 0.11
EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein. 33 0.25
BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p pro... 33 0.25
AY051721-1|AAK93145.1| 1020|Drosophila melanogaster LD25077p pro... 33 0.25
AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA... 33 0.25
AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p pro... 29 5.5
AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA... 29 5.5
AY070616-1|AAL48087.1| 197|Drosophila melanogaster RE71854p pro... 28 9.6
AE014134-1356|AAF52571.2| 197|Drosophila melanogaster CG14534-P... 28 9.6
>EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL EL +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGELPQQKPFQYLLKLTYE 1186
>EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL EL +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGELPQQKPFQYLLKLTYE 1186
>EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL EL +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGELPQQKPFQYLLKLTYE 1186
>EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>AY051721-1|AAK93145.1| 1020|Drosophila melanogaster LD25077p protein.
Length = 1020
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 971 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1006
>AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA
protein.
Length = 1200
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 12 DVELLLPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
D E +LPP+ED L + EL +L +L+K YE
Sbjct: 1151 DSENVLPPMEDFLESVELGDLPQQKPFQYLLKLTYE 1186
>AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p
protein.
Length = 1193
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 83 PSGPLPHQVRVRVPRLGAPPPARVAPSP 166
P LP Q + + P+ GAPPP A P
Sbjct: 42 PQQQLPPQQQQQQPQYGAPPPTSAASQP 69
>AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA
protein.
Length = 1193
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 83 PSGPLPHQVRVRVPRLGAPPPARVAPSP 166
P LP Q + + P+ GAPPP A P
Sbjct: 42 PQQQLPPQQQQQQPQYGAPPPTSAASQP 69
>AY070616-1|AAL48087.1| 197|Drosophila melanogaster RE71854p
protein.
Length = 197
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 86 SGPLPHQVRVRVPRLGAP--PPARVAPS 163
+GP P+ V P GAP PPA APS
Sbjct: 162 TGPYPNSVAPPAPEYGAPAAPPAPSAPS 189
>AE014134-1356|AAF52571.2| 197|Drosophila melanogaster CG14534-PA
protein.
Length = 197
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 86 SGPLPHQVRVRVPRLGAP--PPARVAPS 163
+GP P+ V P GAP PPA APS
Sbjct: 162 TGPYPNSVAPPAPEYGAPAAPPAPSAPS 189
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,224,438
Number of Sequences: 53049
Number of extensions: 302422
Number of successful extensions: 1166
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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