Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E10
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 220 VIGCVLCSPGCFSL 233


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 534 VIGCVLCSPGCFSL 547


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 794 VIGCVLCSPGCFSL 807


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 794 VIGCVLCSPGCFSL 807


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 767 VIGCVLCSPGCFSL 780


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 767 VIGCVLCSPGCFSL 780


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 794 VIGCVLCSPGCFSL 807


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 556 LVSCRRCSAGCLSL 515
           ++ C  CS GC SL
Sbjct: 794 VIGCVLCSPGCFSL 807


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.127    0.339 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,453
Number of Sequences: 336
Number of extensions: 1401
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)