Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E10
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173... 38 0.005
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 33 0.14
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 32 0.32
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 32 0.42
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 31 0.97
03_06_0110 - 31727376-31727381,31727554-31727664,31728071-317281... 30 1.3
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 30 1.7
09_01_0019 + 403078-404211 29 2.3
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 29 2.3
04_01_0290 + 3843610-3843712,3844088-3846003 29 3.9
09_04_0712 + 19670279-19670570,19670676-19670767,19671360-196714... 28 5.2
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 28 5.2
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 28 5.2
09_04_0116 + 14805972-14806511,14807095-14807232,14809906-14810352 28 6.9
03_05_0306 - 22956474-22956980 28 6.9
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 27 9.1
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 27 9.1
02_02_0360 + 9400082-9400524,9406729-9406936 27 9.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 27 9.1
>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
32917396-32917552,32917695-32917753,32918180-32918291,
32918901-32919050,32919180-32919316,32919977-32920123,
32920197-32920298,32920674-32920731,32920840-32920941,
32921905-32921942,32922031-32922157,32922228-32922401,
32922542-32922628,32923838-32923947,32924654-32924714,
32925338-32925515,32925628-32925833,32926108-32926227,
32927202-32927423,32927708-32927847,32927976-32928087,
32928254-32928304,32928384-32928473,32928630-32928800,
32928897-32929049,32929860-32930036,32930131-32930268,
32930363-32930433,32930837-32930936,32931156-32931212,
32931301-32931357,32931451-32931531,32931614-32931696,
32931831-32931966
Length = 1459
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 220 KDIQSVQKQTASIEARIESKRSERHNILRQCKIDDIV--VPLLEGSLDDTADTESDPSSL 393
K I+S+ + A+ ++ +S+ + N L Q ++DD + + +L+GS TA+ E + S+L
Sbjct: 863 KMIESLSAECAAAKSDAQSEHDK--NRLLQRQLDDSLREITMLQGSKIMTAEAEKENSNL 920
Query: 394 STTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQ 555
+ + ++Y S + SD+ +K ++ N LQ +DK+Q
Sbjct: 921 KNLVESLSKRNSSLEYELTSAR----KGSDDTMKKLKDVEGKCNHLQQNLDKLQ 970
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 453 RELERSRGIRRDQAQS*QTTERDKHPAEHRRQDTSAQHEGDAR 581
RELER R R++ + +R KHPA+ RR+ T + GD R
Sbjct: 360 RELERERERLRERRMKERERDR-KHPADSRREHTPPRTPGDRR 401
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +1
Query: 241 KQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESDPSSLSTTEQHRRE 420
++T + +++ K + + ++D+I+ G+ T+ TES S T ++ +
Sbjct: 170 RRTLEEDLKLQKKALDAYKSFISTELDNILQEPANGT-KKTSKTESHKDSGQKTSKNSKR 228
Query: 421 SRIQVDYSALSENLKDLEESDEIKR-KADKLQKGINI---LQNTVDKIQAPNMRA 573
+R D S ++++ + +SDE R K K +KG + + TV+K Q N +A
Sbjct: 229 ARQDSDTSEINDSHCERGDSDEDARPKKKKAEKGKAVKRQKKTTVEK-QLSNSKA 282
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +1
Query: 343 EGSLDDTADTESDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGI 522
E SL D + + +S ST+ + + Q Y+ALSE +D + DE+K K ++ +
Sbjct: 288 EKSLADLRRLQQEINS-STSARTTYFTLQQQQYAALSEENEDTD--DELKEWQTKFEERM 344
Query: 523 NILQNTVDKIQ 555
+LQN + K++
Sbjct: 345 ALLQNKISKLE 355
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 30.7 bits (66), Expect = 0.97
Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 10/145 (6%)
Frame = +1
Query: 208 TSAQKDIQSVQKQTASIEARIESKRSERHNILRQCK--IDDIVVPLLEGSLDDTADTESD 381
T+ Q S + T+ ++A ES+ ++ Q + I P+ + + + T
Sbjct: 92 TAEQSQSASTEAPTSKVDASEESESTQSPKPSEQGETLISSTEPPVSKAEVSEQLATPKT 151
Query: 382 PSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVD----K 549
P SLS TE+ S Y SE + + + + + G I D K
Sbjct: 152 PKSLSATEEKPSHSTESPTYKGDSEAPQSPTDPSTAEENSGSTETGNTIETGNQDHQETK 211
Query: 550 IQAPNMRA----MPEVDRSAGDGER 612
PN A + E DR DG +
Sbjct: 212 YSGPNDEAPQSQIGESDRGIPDGTK 236
>03_06_0110 -
31727376-31727381,31727554-31727664,31728071-31728133,
31729202-31729331,31729532-31729701,31729800-31729859,
31729941-31730018,31730108-31730197,31730275-31731118,
31731220-31731281,31731362-31731423,31731511-31731700
Length = 621
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 340 LEGSLDDTADTESDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKG 519
+E S D D D +LS +Q E + + +S ENL+ LE ++ + RK K+Q
Sbjct: 338 VETSQADNCD--DDKENLSYVDQPT-EQMVIISHSD-GENLQQLENNENVPRKVAKMQSK 393
Query: 520 INILQ 534
+N Q
Sbjct: 394 LNAEQ 398
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 340 LEGSLDDTADTESDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKL 510
L G DDT + + D +S + + +++D EN D+ ESD+ + ++KL
Sbjct: 537 LSGDEDDTEELDED-QDISDNDSEENDDELELDSDMDEEN--DVSESDDDEELSEKL 590
>09_01_0019 + 403078-404211
Length = 377
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 339 AGGEPRRHGRHRVRPLLALHHRAAPQGVENPSGLQCTVRELERSRGIRRDQAQS*QTTER 518
+GGE RR RHR R HHR ++ SG + + +RS RR + ++
Sbjct: 301 SGGEDRRRRRHRKR---QHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSESSGSDG 357
Query: 519 DK 524
D+
Sbjct: 358 DE 359
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 280 RSERHNILRQCKIDDIVVPLLEGSLDDTADTESDPSSLSTTEQHRRESRIQVDYSALSEN 459
R+ N++ ++D+V E +DD + ES+ S S E ES I A+ E
Sbjct: 291 RTADENLVEFGDVEDLVGAACEEDVDD--EQESERSETSVEEHSESESIID---KAIEER 345
Query: 460 LKDLEESDEIKRKADKL 510
L+ ++++I K KL
Sbjct: 346 LEISRKTEKIVEKRPKL 362
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 259 EARIESKRSERHNILRQC-KIDDIVVPLLEGSLDDTADTESDPSSLSTTEQHRRESRIQV 435
EA ++ +E+ +I+++ + V + + L ++E+D ++ + +V
Sbjct: 286 EAAAKAFAAEKEDIMKESDNLKRKVKEIQDSKL--LVESENDELRSEILSMKQKHGQFEV 343
Query: 436 DYSALSENLKDLEESDEIKRKADKLQK 516
+ ++L + L LEE+ EI KA +++K
Sbjct: 344 EVTSLKKELGALEEAKEITTKAFEVEK 370
>09_04_0712 +
19670279-19670570,19670676-19670767,19671360-19671487,
19671615-19671750,19671838-19671889,19671994-19672094,
19672577-19672753,19673370-19673527,19674002-19674107,
19674636-19674806
Length = 470
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 4 RGKNVTRWERAAQDAEDELEGGRQA 78
RG+ TR R EDE EGGR+A
Sbjct: 24 RGRRRTRRRRGGGGVEDEEEGGREA 48
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 433 VDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQAPNMRAMPEVDRSAGDGER 612
VD A + ++E DE+KR+ ++++ N L+ K+ P S E
Sbjct: 20 VDMGAPGDEAAKMQELDEMKRRLKEMEEEANALREMQTKVAKEMQGLDPNASSSESKEEM 79
Query: 613 D 615
D
Sbjct: 80 D 80
>05_01_0072 -
486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 327 SSPAAGGEPRRHGRHRVRPLLALHHRAAPQGVENP 431
SSPAA G P RHG +R + + G NP
Sbjct: 484 SSPAAPGSPLRHGERSMRMQSGIRNFGGSFGSWNP 518
>09_04_0116 + 14805972-14806511,14807095-14807232,14809906-14810352
Length = 374
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 25 WERAAQDAEDELEGGRQAEAKQRADIDAELSRCEN 129
W R DAE + G + +A+ R D DAE + +N
Sbjct: 300 WGRGDNDAESPGDDGAEDDAEARGDDDAESAGGDN 334
>03_05_0306 - 22956474-22956980
Length = 168
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/74 (31%), Positives = 28/74 (37%)
Frame = +3
Query: 321 RHSSPAAGGEPRRHGRHRVRPLLALHHRAAPQGVENPSGLQCTVRELERSRGIRRDQAQS 500
R +SPA+ GEPR R P + A G P G+ RE G RR +
Sbjct: 65 RRASPASWGEPRWLARRPAFPTWESSRKEA-SGSSRPGGMGWQKREGGDPGGWRRARPHL 123
Query: 501 *QTTERDKHPAEHR 542
T A HR
Sbjct: 124 GDTGTEVGEEAAHR 137
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 309 VQDRRHSSPAAGGEPRRHGRHRVRPLLALHHRAAPQGVENPSGLQCTVRELERSRGIRRD 488
+QD H +H LL LHH Q ++ P+ ++ E G R
Sbjct: 105 LQDHHHECNGPYCRCHSSSKHAKGSLLLLHHHHQQQQLQRPNEMETRRAEASTQTGFLRS 164
Query: 489 Q 491
Q
Sbjct: 165 Q 165
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 415 RESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQAPNMRAMPEVD 588
R SRI+ + S L E KDL E E R+ + K I ++ +D++ +A E D
Sbjct: 523 RLSRIEAELSLLKEKQKDLTEQWE--REKSVMTK-IQSIKEEIDRVNVEIQQAEREYD 577
>02_02_0360 + 9400082-9400524,9406729-9406936
Length = 216
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 355 DDTADTESDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADK 507
DD D E + S+ TTE+ E + D + E+ DLE+ D+ D+
Sbjct: 159 DDNGDDEEEVSNDDTTEEVSDEEEVSNDDTTEEED--DLEDDDKSSSDDDE 207
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +1
Query: 205 LTSAQKDIQSVQKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLD--DTADTES 378
L QK+ + ++KQ E + + + K D ++ S+D T+S
Sbjct: 1953 LDQQQKEDEEIEKQKEDEEIEKQKEELQTDEQKHDDKRVDFIIDTQVESIDAFQAEQTDS 2012
Query: 379 DPSSLSTTE--QHRRESRIQVDYSALSENLKDLEESDE 486
+ + E QH E I A+ EN+ +++E E
Sbjct: 2013 VVTEMLNDEVTQHEPEDSIPRTTDAMVENITEIKEETE 2050
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.339
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,236,710
Number of Sequences: 37544
Number of extensions: 192655
Number of successful extensions: 706
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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