Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E10
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 54 8e-08
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.50
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical ... 28 4.7
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 28 6.2
AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 8.2
U64604-2|AAF98624.2| 1093|Caenorhabditis elegans Receptor mediat... 27 8.2
AY750054-1|AAW73253.1| 1093|Caenorhabditis elegans receptor-medi... 27 8.2
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 8.2
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 54.0 bits (124), Expect = 8e-08
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 32/152 (21%)
Frame = +1
Query: 214 AQKDIQSVQKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDD----------- 360
A KD +K+ +E+ + K+ ERH++L K+ I +PL GS+ D
Sbjct: 915 AMKDFTKAEKELLRLESLLTKKQYERHSLLHSVKLGQIALPLKSGSMADVEYEEDDGDIY 974
Query: 361 ---------------TADTESDPSSLSTTEQHRRESRIQ------VDYSALSENLKDLEE 477
+ DT S S +T E +IQ ++Y +L KD+++
Sbjct: 975 FIIFVSLFPFKFQLISDDTASQSSQSATDGPSVSEEQIQREQHIKINYDSLPREYKDVDD 1034
Query: 478 SDEIKRKADKLQKGINILQNTVDKIQAPNMRA 573
D +++ +++L I+ LQ V K+ APN++A
Sbjct: 1035 DDGVRQMSNRLNVEIDELQKNVSKMNAPNLKA 1066
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 0.16
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Frame = +1
Query: 217 QKDIQSVQKQTASIEAR----IESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESDP 384
++ ++ V+K + +E + +ES SE +I + + S+++ +
Sbjct: 217 KQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENE 276
Query: 385 SSLSTTEQHRRESRIQVDYSALSENLKDLEESD----EIKRKADKLQKGINILQNTVDKI 552
+L T + S I + K+LE S+ E++ + D+LQK N Q + K+
Sbjct: 277 RNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKL 336
Query: 553 QAPNMRAMPEVDRSAGD 603
Q M ++ +S D
Sbjct: 337 QKTWELEMAKIAKSTED 353
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 0.16
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 8/137 (5%)
Frame = +1
Query: 217 QKDIQSVQKQTASIEAR----IESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESDP 384
++ ++ V+K + +E + +ES SE +I + + S+++ +
Sbjct: 217 KQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENE 276
Query: 385 SSLSTTEQHRRESRIQVDYSALSENLKDLEESD----EIKRKADKLQKGINILQNTVDKI 552
+L T + S I + K+LE S+ E++ + D+LQK N Q + K+
Sbjct: 277 RNLKTALESDESSAISEITKQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKL 336
Query: 553 QAPNMRAMPEVDRSAGD 603
Q M ++ +S D
Sbjct: 337 QKTWELEMAKIAKSTED 353
>Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical
protein C17H1.10 protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.50
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +1
Query: 217 QKDIQSVQKQTASIEARIESKRSERHNI---LRQCKIDDIVVPLLEGSLDDTADTESDPS 387
+KD++ V+KQ A+ E + R E H L+Q KI++I E + + ++ S
Sbjct: 49 EKDVREVKKQRANFEKQRAEYRVEHHETMEKLKQKKIEEIAQQKKEQQILKMEEMKA-KS 107
Query: 388 SLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQ 555
+ E R + + + LS N++ + S + + + K +N++ + + ++
Sbjct: 108 ERNVMEHQIRMTNMNYAQNMLS-NIESGQASLAVIKHMESCIKSVNVISDLLKDLK 162
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 2.7
Identities = 45/211 (21%), Positives = 79/211 (37%), Gaps = 9/211 (4%)
Frame = +1
Query: 10 KNVTRWERAAQDAEDELEG---GRQAEAKQRADIDAELSRCENLXXXXXXXXXXXXXXXX 180
K + E + ED LE GRQ KQR ++ EL + L
Sbjct: 1032 KTKAKLESTLDELEDTLEREKRGRQDCEKQRRKVEGELKIAQELIEELNRHKHEQEQVIK 1091
Query: 181 XXXXXXXXLTSAQKDIQS----VQKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEG 348
+ S +D QS +Q+Q + ARI+ E + ++
Sbjct: 1092 KKDIELSSIQSRLEDEQSLVAKLQRQIKELLARIQELEEELDAERNSRSKAEKARNEMQM 1151
Query: 349 SLDDTADTESDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKA--DKLQKGI 522
L++ D D + +T Q + + + + L ++L+D + E A K +
Sbjct: 1152 ELEELGD-RLDEAGGATQAQIELNKKREAELAKLRQDLEDAAINSETSMAALRKKHNDAV 1210
Query: 523 NILQNTVDKIQAPNMRAMPEVDRSAGDGERD 615
L + +D IQ MR +++R D +R+
Sbjct: 1211 AELSDQLDTIQ--KMRG--KLEREKNDKQRE 1237
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical protein
C18C4.5b protein.
Length = 1046
Score = 28.7 bits (61), Expect = 3.5
Identities = 34/186 (18%), Positives = 74/186 (39%)
Frame = +1
Query: 16 VTRWERAAQDAEDELEGGRQAEAKQRADIDAELSRCENLXXXXXXXXXXXXXXXXXXXXX 195
+T W+ A+ AE+ +E + DA+++R EN
Sbjct: 505 ITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLEN------EKTQMEEALEKADQEK 558
Query: 196 XXXLTSAQKDIQSVQKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTE 375
+ A + ++ ++++ EA I S R + L++ K+D + LE S +
Sbjct: 559 DQAIREASESVRVMKREMT--EASITSDRQIQS--LKE-KVDSLTRE-LESSRRRMEQLQ 612
Query: 376 SDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQ 555
D + + + ++ + A E K ++ ++K K + L + QN ++++
Sbjct: 613 EDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLK 672
Query: 556 APNMRA 573
A +A
Sbjct: 673 AQYEKA 678
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical protein
C18C4.5a protein.
Length = 1022
Score = 28.7 bits (61), Expect = 3.5
Identities = 34/186 (18%), Positives = 74/186 (39%)
Frame = +1
Query: 16 VTRWERAAQDAEDELEGGRQAEAKQRADIDAELSRCENLXXXXXXXXXXXXXXXXXXXXX 195
+T W+ A+ AE+ +E + DA+++R EN
Sbjct: 505 ITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLEN------EKTQMEEALEKADQEK 558
Query: 196 XXXLTSAQKDIQSVQKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTE 375
+ A + ++ ++++ EA I S R + L++ K+D + LE S +
Sbjct: 559 DQAIREASESVRVMKREMT--EASITSDRQIQS--LKE-KVDSLTRE-LESSRRRMEQLQ 612
Query: 376 SDPSSLSTTEQHRRESRIQVDYSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQ 555
D + + + ++ + A E K ++ ++K K + L + QN ++++
Sbjct: 613 EDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLK 672
Query: 556 APNMRA 573
A +A
Sbjct: 673 AQYEKA 678
>AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical
protein F23F1.5 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 322 DIVVPLLEGSLDDTADTESDPSSLSTT--EQHRRESRIQVDYSALSENLKDLEES 480
D + L + DD E D + TT E+H + + D LSE L D+ ES
Sbjct: 59 DTFMKLRNLAFDDVTSDEDDEQKIETTTAEKHTGKFKKYADKMMLSEWLVDIPES 113
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 358 DTADTESDPSSLSTTEQHRRES-RIQVDYSALSENLKDLEESDEIKRK 498
D +ESDPS S ++HR S R Q S +++ D E E +R+
Sbjct: 353 DGYSSESDPSDFSRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERE 400
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 358 DTADTESDPSSLSTTEQHRRES-RIQVDYSALSENLKDLEESDEIKRK 498
D +ESDPS S ++HR S R Q S +++ D E E +R+
Sbjct: 353 DGYSSESDPSDFSRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERE 400
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 358 DTADTESDPSSLSTTEQHRRES-RIQVDYSALSENLKDLEESDEIKRK 498
D +ESDPS S ++HR S R Q S +++ D E E +R+
Sbjct: 347 DGYSSESDPSDFSRHQRHRSNSKRRQRSRSRYDDSVYDSEADRERERE 394
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 324 HSSPAAGGEPRRHGRHRVRPLLALHHRAAPQGVENPSGLQ 443
H P RR+ RH + L +R PQGV +P L+
Sbjct: 172 HMLPVMSSPLRRYARHLAVNVRNLMYRQYPQGVTSPQLLE 211
>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
protein Y22D7AR.12 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 439 YSALSENLKDLEESDEIKRKADKLQKGINILQNTVDKIQAPNMRA 573
YSA+SEN+K L+ S E+ LQ+ + +Q DK+ N A
Sbjct: 80 YSAISENVKGLKGSFEVPANHKLLQEVESFIQ-YYDKLNVKNALA 123
>AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1b protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 589 GQLLASPSCWALVSCRRCSAGCLSLSVVCQLC 494
G LLA+P+C A +C SA C S+ C +C
Sbjct: 2 GALLAAPACAASSACCFGSAAC---SLCCSIC 30
>AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1a protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 589 GQLLASPSCWALVSCRRCSAGCLSLSVVCQLC 494
G LLA+P+C A +C SA C S+ C +C
Sbjct: 2 GALLAAPACAASSACCFGSAAC---SLCCSIC 30
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 205 LTSAQKDIQSV-QKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESD 381
L +AQK + ++ Q++ I+ + S R+ +Q +++ + + + +
Sbjct: 253 LVNAQKLMDAISQEKDIEIKEHLNSIRNLSMEREKQHIVNENLEKKIGEGEETVKQLQIS 312
Query: 382 PSSLSTTEQHRRESRIQVDYSALSENLKDLEESDE-IKRKADKLQKGINILQ 534
+ S + R E +Q++ + + EN+ +L E+ + +KR DK+Q+ + LQ
Sbjct: 313 YDAQSEELKQRNERVVQLE-ARIEENVFELSENKQNVKRLEDKVQESQDALQ 363
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 205 LTSAQKDIQSV-QKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESD 381
L +AQK + ++ Q++ I+ + S R+ +Q +++ + + + +
Sbjct: 255 LVNAQKLMDAISQEKDIEIKEHLNSIRNLSMEREKQHIVNENLEKKIGEGEETVKQLQIS 314
Query: 382 PSSLSTTEQHRRESRIQVDYSALSENLKDLEESDE-IKRKADKLQKGINILQ 534
+ S + R E +Q++ + + EN+ +L E+ + +KR DK+Q+ + LQ
Sbjct: 315 YDAQSEELKQRNERVVQLE-ARIEENVFELSENKQNVKRLEDKVQESQDALQ 365
>U64604-2|AAF98624.2| 1093|Caenorhabditis elegans Receptor mediated
endocytosis protein6, isoform a protein.
Length = 1093
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 454 ENLKDLEESDEIKRKADKLQKGINILQNTVDKIQAPNMRAMPE--VDRSAGDGE 609
+N KD+ E+D +K+KA++ ++ + L+ ++ AP + +D S+G E
Sbjct: 524 KNYKDVAEADRLKKKAEE-RRQLADLEKLLEPTPAPKETPVENNLIDFSSGSAE 576
>AY750054-1|AAW73253.1| 1093|Caenorhabditis elegans
receptor-mediated endocytosis 6 protein.
Length = 1093
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 454 ENLKDLEESDEIKRKADKLQKGINILQNTVDKIQAPNMRAMPE--VDRSAGDGE 609
+N KD+ E+D +K+KA++ ++ + L+ ++ AP + +D S+G E
Sbjct: 524 KNYKDVAEADRLKKKAEE-RRQLADLEKLLEPTPAPKETPVENNLIDFSSGSAE 576
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/112 (21%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 205 LTSAQKDIQSV-QKQTASIEARIESKRSERHNILRQCKIDDIVVPLLEGSLDDTADTESD 381
L +AQK + ++ Q++ I+ + S R+ +Q +++ + + + +
Sbjct: 255 LVNAQKLMDAISQEKDIEIKEHLNSIRNLSMEREKQHIVNENLEKKIGEGEETVKQLQIS 314
Query: 382 PSSLSTTEQHRRESRIQVDYSALSENLKDLEESDE-IKRKADKLQKGINILQ 534
+ S + R E +Q++ + + EN+ +L E+ + +KR DK+Q+ + LQ
Sbjct: 315 YDAQSEELKQRNERVVQLE-ARIEENVFELSENKQNVKRLEDKVQESQDALQ 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.127 0.339
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,088,298
Number of Sequences: 27780
Number of extensions: 152425
Number of successful extensions: 587
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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