Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E09
(596 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 339 3e-92
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 299 4e-80
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 295 7e-79
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 272 3e-72
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 269 4e-71
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 223 3e-57
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 221 1e-56
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 219 3e-56
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 199 3e-50
UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;... 196 2e-49
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 195 8e-49
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 190 3e-47
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 177 2e-43
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 177 2e-43
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 177 2e-43
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 175 5e-43
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 175 5e-43
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 173 3e-42
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 169 3e-41
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 169 4e-41
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 168 7e-41
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 166 3e-40
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 166 3e-40
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 165 5e-40
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 165 7e-40
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 164 2e-39
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 163 3e-39
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 162 5e-39
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 162 6e-39
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 158 1e-37
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 157 2e-37
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 156 3e-37
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 156 4e-37
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 155 6e-37
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 155 7e-37
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 155 1e-36
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 154 2e-36
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 153 3e-36
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 153 3e-36
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 153 3e-36
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 153 3e-36
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 153 4e-36
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 152 5e-36
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 151 1e-35
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 151 2e-35
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 150 2e-35
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 150 2e-35
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 150 2e-35
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 149 4e-35
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 149 6e-35
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 149 6e-35
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 148 9e-35
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 148 9e-35
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 148 9e-35
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 148 1e-34
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 147 1e-34
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 147 2e-34
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 147 2e-34
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 147 2e-34
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 146 3e-34
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 145 6e-34
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 145 6e-34
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 145 8e-34
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 144 1e-33
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 144 1e-33
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 144 1e-33
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 144 2e-33
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 144 2e-33
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 144 2e-33
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 144 2e-33
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 143 2e-33
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 143 3e-33
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 142 4e-33
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 142 6e-33
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 142 6e-33
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 142 6e-33
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 142 6e-33
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 142 7e-33
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 142 7e-33
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 141 1e-32
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 141 1e-32
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 141 1e-32
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 141 1e-32
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 141 1e-32
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 140 2e-32
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 140 2e-32
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 140 2e-32
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 140 2e-32
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 139 4e-32
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 139 4e-32
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 139 4e-32
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 139 4e-32
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 139 4e-32
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 139 4e-32
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 139 5e-32
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 138 7e-32
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 138 7e-32
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 138 7e-32
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 138 7e-32
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 138 7e-32
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 138 7e-32
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 138 9e-32
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 138 9e-32
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 138 9e-32
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 138 9e-32
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 138 1e-31
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 138 1e-31
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 138 1e-31
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 138 1e-31
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 137 2e-31
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 137 2e-31
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 137 2e-31
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 137 2e-31
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 137 2e-31
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 137 2e-31
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 137 2e-31
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 137 2e-31
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 136 3e-31
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 136 3e-31
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 136 3e-31
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 136 4e-31
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 136 4e-31
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 136 4e-31
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 136 5e-31
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 136 5e-31
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 136 5e-31
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 136 5e-31
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 136 5e-31
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 136 5e-31
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 136 5e-31
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 135 6e-31
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 135 6e-31
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 135 6e-31
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 135 6e-31
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 135 9e-31
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 134 1e-30
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 134 1e-30
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 134 1e-30
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 134 1e-30
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 134 1e-30
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 134 1e-30
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 134 1e-30
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 134 2e-30
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 134 2e-30
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 134 2e-30
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 134 2e-30
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 134 2e-30
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 134 2e-30
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 133 3e-30
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 133 3e-30
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 133 3e-30
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 133 3e-30
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 133 3e-30
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 133 3e-30
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 133 3e-30
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 133 3e-30
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 133 3e-30
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 133 3e-30
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 133 3e-30
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 133 3e-30
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 133 3e-30
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 133 3e-30
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 133 3e-30
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 5e-30
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 132 6e-30
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 132 6e-30
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 132 6e-30
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 132 8e-30
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 132 8e-30
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 132 8e-30
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 132 8e-30
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 131 1e-29
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 131 1e-29
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 131 1e-29
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 131 1e-29
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 131 1e-29
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 131 1e-29
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 131 1e-29
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 131 1e-29
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 131 1e-29
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 131 1e-29
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 131 1e-29
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 130 2e-29
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 130 2e-29
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 130 2e-29
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 130 2e-29
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 130 2e-29
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 130 2e-29
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 130 2e-29
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 130 3e-29
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 130 3e-29
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 130 3e-29
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 130 3e-29
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 129 4e-29
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 129 4e-29
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 129 4e-29
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 129 4e-29
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 129 6e-29
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 6e-29
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 129 6e-29
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 129 6e-29
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 129 6e-29
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 128 7e-29
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 128 7e-29
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 128 7e-29
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 128 7e-29
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 128 7e-29
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 128 1e-28
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 128 1e-28
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 128 1e-28
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 128 1e-28
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 128 1e-28
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 128 1e-28
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 128 1e-28
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 128 1e-28
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 128 1e-28
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 128 1e-28
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 127 2e-28
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 127 2e-28
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 127 2e-28
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 127 2e-28
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 127 2e-28
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 127 2e-28
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 127 2e-28
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 127 2e-28
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 126 3e-28
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 126 3e-28
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 126 3e-28
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 126 3e-28
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 126 3e-28
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 126 3e-28
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 126 3e-28
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 126 3e-28
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 126 3e-28
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 126 4e-28
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 126 4e-28
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 126 4e-28
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 126 4e-28
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 126 4e-28
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 126 4e-28
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 126 5e-28
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 126 5e-28
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 125 7e-28
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 125 7e-28
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 125 7e-28
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 125 7e-28
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 125 7e-28
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 125 7e-28
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 125 7e-28
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 125 9e-28
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 125 9e-28
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 125 9e-28
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 125 9e-28
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 124 1e-27
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 124 1e-27
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 124 1e-27
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 124 1e-27
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 124 2e-27
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 124 2e-27
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 124 2e-27
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 124 2e-27
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 124 2e-27
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 124 2e-27
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 124 2e-27
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 123 3e-27
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 123 3e-27
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 123 3e-27
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 123 3e-27
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 123 3e-27
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 123 4e-27
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 123 4e-27
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 123 4e-27
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 123 4e-27
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 123 4e-27
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 122 5e-27
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 122 5e-27
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 122 5e-27
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 122 5e-27
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 122 5e-27
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 122 6e-27
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 122 6e-27
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 122 6e-27
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 122 8e-27
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 122 8e-27
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 121 1e-26
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 121 1e-26
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 121 1e-26
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 121 1e-26
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 121 1e-26
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 121 1e-26
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 121 1e-26
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 121 1e-26
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 120 2e-26
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 120 3e-26
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 120 3e-26
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 120 3e-26
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 119 5e-26
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 119 5e-26
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 119 5e-26
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 119 6e-26
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 119 6e-26
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 119 6e-26
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 118 8e-26
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 118 8e-26
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 118 8e-26
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 118 8e-26
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 118 8e-26
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 118 8e-26
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 118 8e-26
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 118 1e-25
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 118 1e-25
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 118 1e-25
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 118 1e-25
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 118 1e-25
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 118 1e-25
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 118 1e-25
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 118 1e-25
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 118 1e-25
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 118 1e-25
UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2; Theileria|... 118 1e-25
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 117 2e-25
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 117 2e-25
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 117 2e-25
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 117 2e-25
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 117 2e-25
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 117 2e-25
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 117 2e-25
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 117 2e-25
UniRef50_Q09775 Cluster: ATP-dependent RNA helicase rok1; n=1; S... 117 2e-25
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 117 2e-25
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 117 2e-25
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 117 2e-25
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 117 2e-25
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 117 2e-25
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 117 2e-25
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 117 2e-25
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 117 2e-25
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 117 2e-25
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 116 3e-25
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 116 3e-25
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 116 3e-25
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 116 3e-25
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 116 4e-25
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 116 4e-25
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 116 4e-25
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 116 4e-25
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 116 4e-25
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 116 6e-25
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 116 6e-25
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 116 6e-25
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 116 6e-25
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 116 6e-25
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 116 6e-25
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 116 6e-25
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 115 7e-25
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 115 7e-25
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 115 7e-25
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 115 7e-25
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 115 7e-25
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 115 7e-25
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 115 7e-25
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 115 7e-25
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 115 7e-25
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 115 1e-24
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 115 1e-24
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 115 1e-24
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 115 1e-24
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 115 1e-24
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 114 1e-24
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 114 1e-24
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 114 1e-24
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 114 1e-24
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 114 2e-24
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 114 2e-24
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 114 2e-24
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 114 2e-24
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 114 2e-24
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 114 2e-24
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 114 2e-24
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 113 2e-24
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 113 2e-24
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 2e-24
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 113 2e-24
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 113 2e-24
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 113 2e-24
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 113 2e-24
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 113 2e-24
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 113 2e-24
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 113 3e-24
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 113 3e-24
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 113 3e-24
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 113 3e-24
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 113 3e-24
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 113 3e-24
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 113 3e-24
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 113 3e-24
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 113 4e-24
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 113 4e-24
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 113 4e-24
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 113 4e-24
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 113 4e-24
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 113 4e-24
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 113 4e-24
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 113 4e-24
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 112 5e-24
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 112 5e-24
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 112 5e-24
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 112 5e-24
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 112 5e-24
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 112 5e-24
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 112 5e-24
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 112 5e-24
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 112 7e-24
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 112 7e-24
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 112 7e-24
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 111 9e-24
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 111 9e-24
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 111 9e-24
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 111 9e-24
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 111 9e-24
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 111 9e-24
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 111 9e-24
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 75 1e-23
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 111 1e-23
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 111 1e-23
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 111 1e-23
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 111 1e-23
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 111 1e-23
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 111 2e-23
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 111 2e-23
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 111 2e-23
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 111 2e-23
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 111 2e-23
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 111 2e-23
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 111 2e-23
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 110 2e-23
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 110 2e-23
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 110 2e-23
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 110 3e-23
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 110 3e-23
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 80 3e-23
UniRef50_UPI0000E495C3 Cluster: PREDICTED: hypothetical protein;... 109 4e-23
UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1; ... 109 4e-23
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 109 5e-23
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 109 5e-23
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 109 5e-23
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 109 5e-23
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 109 5e-23
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 109 5e-23
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 109 5e-23
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 109 5e-23
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 109 6e-23
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 109 6e-23
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 109 6e-23
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 109 6e-23
UniRef50_A2FQ89 Cluster: Type III restriction enzyme, res subuni... 109 6e-23
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 109 6e-23
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 109 6e-23
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 109 6e-23
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 108 8e-23
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 108 8e-23
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 108 8e-23
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 108 8e-23
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 108 8e-23
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 108 8e-23
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 108 8e-23
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 108 8e-23
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 108 8e-23
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 108 8e-23
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 108 1e-22
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 108 1e-22
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 108 1e-22
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 108 1e-22
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 108 1e-22
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 108 1e-22
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 107 1e-22
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 107 1e-22
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 107 1e-22
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 107 1e-22
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 107 2e-22
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 107 2e-22
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 107 3e-22
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 107 3e-22
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 107 3e-22
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 106 3e-22
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 106 3e-22
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 106 3e-22
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 106 3e-22
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 106 5e-22
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 106 5e-22
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 106 5e-22
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 105 6e-22
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 105 6e-22
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 105 6e-22
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 105 6e-22
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 105 6e-22
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 339 bits (833), Expect = 3e-92
Identities = 159/197 (80%), Positives = 180/197 (91%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L IK+FVLDEADEMLSRGFKDQI+++F+ L+ +QV+LLSATMP DVLEV++ FM
Sbjct: 170 RYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFM 229
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
RDP+RILV+KEELTLEGIKQFYI +E EEWKL+TLCDLY+TL+I QAVIF NTRRKVDWL
Sbjct: 230 RDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWL 289
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
TE MH RDFTVSA+HGDMDQ+ER+VIMR+FR+GSSRVLITTDLLARGIDVQQVS VINYD
Sbjct: 290 TEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 349
Query: 544 LPTNRENYIHRIGRGGR 594
LPTNRENYIHRIGRGGR
Sbjct: 350 LPTNRENYIHRIGRGGR 366
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 299 bits (733), Expect = 4e-80
Identities = 134/197 (68%), Positives = 169/197 (85%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R LR IK+ VLDEADEML++GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM
Sbjct: 174 RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFM 233
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+RILV+++ELTLEGIKQF++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVDWL
Sbjct: 234 TDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWL 293
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
TE M E +FTVS+MHGDM Q+ERE IM++FR+G+SRVLI+TD+ ARG+DV QVS +INYD
Sbjct: 294 TEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYD 353
Query: 544 LPTNRENYIHRIGRGGR 594
LP NRE YIHRIGR GR
Sbjct: 354 LPNNRELYIHRIGRSGR 370
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 295 bits (723), Expect = 7e-79
Identities = 138/166 (83%), Positives = 155/166 (93%)
Frame = +1
Query: 97 FKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWK 276
F+ LS ++QV+LLSATMP +VLEV++ FMRDPVRILV+KEELTLEGIKQFYI +E EEWK
Sbjct: 160 FQKLSTNIQVVLLSATMPAEVLEVTKKFMRDPVRILVKKEELTLEGIKQFYINVEREEWK 219
Query: 277 LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFR 456
L+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMDQ+ER+VIMR+FR
Sbjct: 220 LDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFR 279
Query: 457 TGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHRIGRGGR 594
+GSSRVLITTDLLARGIDVQQVS VINYDLPTNRENYIHRIGRGGR
Sbjct: 280 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGR 325
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 272 bits (668), Expect = 3e-72
Identities = 127/197 (64%), Positives = 158/197 (80%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R + A I+L VLDEAD+ML GFKDQIH++F L +VQ ILLSATMP VLE ++ FM
Sbjct: 120 RAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQAILLSATMPAHVLEATKMFM 179
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+DPV+IL+++EELT+EGI+QFYI E EE KLE+LC LY TL+I QAVIF NTR+K +WL
Sbjct: 180 QDPVKILIKREELTMEGIQQFYIKTETEEKKLESLCGLYSTLTITQAVIFVNTRKKAEWL 239
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + +DFTVS +H +M Q ER+ M++FR+GSSRV ITTDLL+RGIDVQQVS VIN+D
Sbjct: 240 TQELMSKDFTVSVLHSEMGQSERDTTMKEFRSGSSRVFITTDLLSRGIDVQQVSLVINFD 299
Query: 544 LPTNRENYIHRIGRGGR 594
LPT E+YIHRIGR GR
Sbjct: 300 LPTKLESYIHRIGRSGR 316
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 269 bits (659), Expect = 4e-71
Identities = 119/190 (62%), Positives = 161/190 (84%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+KLF+LDEADEML RGFKDQI+ +F+ L D+QV L SATM ++LE+++ FMRDP IL
Sbjct: 244 LKLFILDEADEMLGRGFKDQINKIFQNLPHDIQVALFSATMAPEILEITKQFMRDPATIL 303
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V+ ++LTL+GIKQFYIA++ EEWK +TL +LY+ + IAQA+I+CNT+++VD L + + E+
Sbjct: 304 VKNDDLTLDGIKQFYIALDKEEWKFDTLVELYNNIEIAQAIIYCNTKKRVDELRDKLIEK 363
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ TVSAMHG+MDQ+ R++IM++FRTG+SRVLITTDLL+RGID+ QV+ VINYDLP +E+
Sbjct: 364 NMTVSAMHGEMDQQNRDLIMKEFRTGTSRVLITTDLLSRGIDIHQVNLVINYDLPLKKES 423
Query: 565 YIHRIGRGGR 594
YIHRIGR GR
Sbjct: 424 YIHRIGRSGR 433
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 223 bits (544), Expect = 3e-57
Identities = 97/196 (49%), Positives = 150/196 (76%), Gaps = 1/196 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L A+ ++L V+DEAD+ML +GF D ++ KM+ D+Q+ L SAT P +++E+S+ F+RD
Sbjct: 194 LDATFMRLLVVDEADQMLDQGFSDNFAEILKMVPGDIQIALFSATFPQEIIELSKQFLRD 253
Query: 190 -PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ILV+KE+LTLEGI+QFYIAI+ E+ K + L +LY L+++Q+++FCN+++ VD L
Sbjct: 254 GTAKILVKKEQLTLEGIRQFYIAIQQEDQKFKVLVELYKNLTVSQSILFCNSKKTVDDLY 313
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ + FTVS +H M+Q+ERE +M++F+ G++R+L++TDL+ RGIDVQQ+S VINY+
Sbjct: 314 DKLTAEGFTVSKIHSQMEQKEREQVMQEFKKGAARILVSTDLMGRGIDVQQLSLVINYEF 373
Query: 547 PTNRENYIHRIGRGGR 594
P +E YIHR+GR GR
Sbjct: 374 PRLKEQYIHRVGRAGR 389
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 221 bits (540), Expect = 1e-56
Identities = 98/147 (66%), Positives = 125/147 (85%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R LR IK+ VLDEADEML++GFK+QI+DV++ L QV+L+SAT+P ++LE++ FM
Sbjct: 153 RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFM 212
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+RILV+++ELTLEGIKQF++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVDWL
Sbjct: 213 TDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWL 272
Query: 364 TESMHERDFTVSAMHGDMDQREREVIM 444
TE M E +FTVS+MHGDM Q+ERE IM
Sbjct: 273 TEKMREANFTVSSMHGDMPQKERESIM 299
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 219 bits (536), Expect = 3e-56
Identities = 100/195 (51%), Positives = 141/195 (72%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR K+ VLDEAD+MLS F +Q++D+ + DVQ++L SAT+ + + FM D
Sbjct: 233 LRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYFPEDVQILLFSATISQSIFHIMNTFMND 292
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P RIL++KE+LTLEGIKQFY+ ++ K + L D+Y ++SI +A+IF N++ VD+++E
Sbjct: 293 PFRILIKKEQLTLEGIKQFYVDVQETSNKFDCLLDIYGSVSIQKAIIFANSKNAVDYISE 352
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + F V+ +H +DQ ER+ IMR FRTG++RVLI+TDLLARGIDVQQV+ VIN++LP
Sbjct: 353 QLQQHGFGVAPIHAGLDQLERDRIMRDFRTGTARVLISTDLLARGIDVQQVTLVINFELP 412
Query: 550 TNRENYIHRIGRGGR 594
E YIHRIGR GR
Sbjct: 413 KKLEQYIHRIGRSGR 427
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 199 bits (486), Expect = 3e-50
Identities = 91/190 (47%), Positives = 133/190 (70%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+K+ +LDEADEML K ++ +FK L Q +L++AT+ D+L+ F +P+ I+
Sbjct: 165 LKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYVLVTATLSQDILDFIEKFFNNPLVIM 224
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
++ ELTLEGI+QF+I ++ E+WK ETLCDLY+ SI Q+VIFC T++K +WL M E
Sbjct: 225 DKRNELTLEGIQQFFIQVDKEDWKFETLCDLYEIASITQSVIFCQTKQKCEWLVNKMLES 284
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+FTV +H M Q++R IMR ++ G RVLI TD+L R +D++ VS +INYD+PT++E
Sbjct: 285 NFTVVQIHEGMSQQQRNEIMRDYKQGIKRVLIGTDILRRCLDIEYVSLIINYDVPTSKEL 344
Query: 565 YIHRIGRGGR 594
YI RIGR G+
Sbjct: 345 YILRIGRKGK 354
>UniRef50_UPI0001553738 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 490
Score = 196 bits (479), Expect = 2e-49
Identities = 90/105 (85%), Positives = 98/105 (93%)
Frame = +1
Query: 268 EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMR 447
EWKL+TLCDLY+TL+I QAVIF NTRRKVDWLTE MH RDFTVSA+HGDMDQ+ER+VIMR
Sbjct: 350 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 409
Query: 448 QFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHRIG 582
+FR+GSSRVLITTDLLA GIDVQQVS VINYDLPTNRENYIHR G
Sbjct: 410 EFRSGSSRVLITTDLLAHGIDVQQVSLVINYDLPTNRENYIHRKG 454
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 195 bits (475), Expect = 8e-49
Identities = 88/195 (45%), Positives = 139/195 (71%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + I+ FVLDEAD ++++ FK I ++++ L++ VQ+I+ SAT+P L+ + F+ D
Sbjct: 148 LAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIIICSATIPLYTLQAASKFLLD 207
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV IL++KEE+ ++ IKQFYI++ +EE KL L D+++TL + Q +IFCNT RK +W+
Sbjct: 208 PVMILMRKEEINIDKIKQFYISVFIEENKLLALLDIFETLLVGQVLIFCNTIRKANWIHN 267
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ +F V +HG + Q+ER I + FR G +R L+TTD+ +RG+++ +VS VINYD+P
Sbjct: 268 KLLANNFNVGLIHGRVIQKERTNIFKNFRDGKTRALVTTDVSSRGLNIPEVSLVINYDIP 327
Query: 550 TNRENYIHRIGRGGR 594
T ++ Y+HRIGR GR
Sbjct: 328 TFKDVYLHRIGRTGR 342
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 190 bits (462), Expect = 3e-47
Identities = 92/195 (47%), Positives = 128/195 (65%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L ++ +F+LDEAD+ML GF++ I D+F+ D Q IL SATMP +L+++R F RD
Sbjct: 144 LHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTILFSATMPQPILDITRRFQRD 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + + ++ELT+ I+Q YI + E KLE LC D + A++FCNT+R VD L
Sbjct: 204 PQFVKITRKELTVPQIEQTYIEVR-ERDKLEALCRTLDMNNPELALVFCNTKRTVDDLMS 262
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
M R + V A+HGDM Q++R+ +M +FR+GS VLI TD+ ARGIDV V V NYD+P
Sbjct: 263 RMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLIATDVAARGIDVDDVDIVFNYDVP 322
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR R
Sbjct: 323 QDVEYYVHRIGRTAR 337
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 177 bits (431), Expect = 2e-43
Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L + I VLDEADEML+ GF D + ++ K L D Q +L SATMP + +++R +M
Sbjct: 142 KSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYM 201
Query: 184 RDPVR-ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
++ + I ++K LT+ I+QFY I+ + + ETLC + D A+IFC T++ VD
Sbjct: 202 KEDTKHIAIKKSSLTVSKIEQFYFEIKHRD-RFETLCRVLDFDEPNAAIIFCKTKKGVDE 260
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ E M R + V MHGDM Q R +R+F+ GS L+ TD+ ARGIDV+ V+ VINY
Sbjct: 261 VVEKMQARGYMVEGMHGDMSQNHRLQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINY 320
Query: 541 DLPTNRENYIHRIGRGGR 594
DLP + E+Y+HRIGR GR
Sbjct: 321 DLPQDNESYVHRIGRTGR 338
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 177 bits (430), Expect = 2e-43
Identities = 79/102 (77%), Positives = 94/102 (92%)
Frame = +1
Query: 265 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIM 444
+EWKL TLCDLY+TL+I QAVIF NTRRKVDWLTE++ +DFTVSAMHGDM+Q+ R+++M
Sbjct: 113 QEWKLPTLCDLYETLTITQAVIFVNTRRKVDWLTENLLGKDFTVSAMHGDMEQKTRDLVM 172
Query: 445 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
++FR+GSSR+LITTDLLARGIDVQQVS VINYDLP NRENYI
Sbjct: 173 KEFRSGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYI 214
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 177 bits (430), Expect = 2e-43
Identities = 83/190 (43%), Positives = 121/190 (63%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ +LDEADEML GF D I + + + + Q +L SATMP + ++SR +M DP +
Sbjct: 148 VNTVILDEADEMLDMGFIDDIESILRQVKNERQTLLFSATMPPAIKKLSRKYMNDPQTVS 207
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ + E+T I QFY + LE KL++LC + D+ I ++FC T++ V LTE++ R
Sbjct: 208 INRREVTAPSIDQFYYKV-LERNKLDSLCRIIDSEQIDLGILFCRTKKGVAELTEALQAR 266
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ +HGD+ Q +R+ +MR+FR S LI TD+ ARGIDV VS VINYD+P + E+
Sbjct: 267 GYIADGLHGDLTQSQRDAVMRKFRDSSIEFLIATDVAARGIDVGNVSHVINYDIPQDPES 326
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 327 YVHRIGRTGR 336
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 175 bits (427), Expect = 5e-43
Identities = 86/195 (44%), Positives = 130/195 (66%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
++A ++ VLDEADEML+ FK I D+ + L Q ++++AT+ DV+E++ +R+
Sbjct: 154 IQAEKVQSVVLDEADEMLT-SFKSTIMDILQKLP-HAQKVIVTATVSADVVELATAHLRN 211
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
V I V ++ELTL GI Q+ + +E EEWK +TL D+Y +++I +AVIF N+ K +WL
Sbjct: 212 SVEIRVPRDELTLTGIDQYVVRVENEEWKFDTLIDIYQSIAIEKAVIFVNSVEKGNWLKG 271
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
M + FTV+ +HG M +R I +FR+G +RVLI TD+ +RGIDV+ V+ VIN+D
Sbjct: 272 KMVDSGFTVALVHGQMTMDDRAKITEEFRSGEARVLIATDVFSRGIDVRNVTLVINFDFA 331
Query: 550 TNRENYIHRIGRGGR 594
+ Y+HRIGR GR
Sbjct: 332 LTCDVYLHRIGRSGR 346
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 175 bits (427), Expect = 5e-43
Identities = 93/197 (47%), Positives = 129/197 (65%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L I++FVLDEADE+L RGFKDQIH + + L Q SA+M + LE+ R +M
Sbjct: 182 RALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYM 240
Query: 184 RDPVRILVQKEELTLEGI--KQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
PV I+V ++E LEGI KQFY+ +E E+ KL+ LC L+DT+ I +++IF NTR
Sbjct: 241 NKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSIIFVNTRHHAK 299
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
LTE + + +TVSA+HG + QR R+ +++F++GSSR+LITTDL RGIDV + I
Sbjct: 300 SLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIF 357
Query: 538 YDLPTNRENYIHRIGRG 588
YDLPT Y+ + G
Sbjct: 358 YDLPTQPVCYLRHVQSG 374
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 173 bits (420), Expect = 3e-42
Identities = 81/192 (42%), Positives = 119/192 (61%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +K VLDEADEML GF I + + Q L SAT+PD+V E+ FM+ P
Sbjct: 144 SPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFMKQPEI 203
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
IL++ E T+ I+Q+Y + K+ETLC + D ++IFC T+R D L +
Sbjct: 204 ILIESPERTVPEIEQYYYQVNSRR-KIETLCRIIDAQQPPISLIFCRTKRNADELARVLT 262
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
R + A+HGDM QRER+ +M FR G++++L+ TDL ARG+D++ V+ V N+D+P +
Sbjct: 263 SRGYNADALHGDMSQRERDHVMHGFRQGNTKILVATDLAARGLDIELVTHVFNFDIPEDL 322
Query: 559 ENYIHRIGRGGR 594
++YIHR+GR GR
Sbjct: 323 DSYIHRVGRTGR 334
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 169 bits (412), Expect = 3e-41
Identities = 84/190 (44%), Positives = 120/190 (63%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
IK+ VLDEADEML GF++ + + K AD Q I+ SATM DDVL + + F P I
Sbjct: 153 IKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFSATMTDDVLTLMKKFQNHPQIID 212
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V ++L+ I+Q Y I+ E K E L L + ++ A++FCNT+ +VD + E + R
Sbjct: 213 VTHQKLSAPKIEQIYYEIQ-ENAKGEALARLIEYRNVKLALVFCNTKAQVDTVVELLKSR 271
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ A+HGD++Q++R+ +M FR GS +L+ TD+ RGIDV V V NYDLP + E+
Sbjct: 272 GYFAEALHGDLNQKQRDKVMSGFRKGSIEILVATDVAGRGIDVNNVEAVFNYDLPRDGED 331
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 332 YVHRIGRTGR 341
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 169 bits (411), Expect = 4e-41
Identities = 85/197 (43%), Positives = 128/197 (64%), Gaps = 7/197 (3%)
Frame = +1
Query: 25 IKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
I++FVLDEAD M+ ++GF D + + L ++ Q++L SAT D V + + DP I
Sbjct: 241 IRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVI 300
Query: 202 LVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
++KEELTL I+Q+Y+ E + K + LC++Y +++I QA+IFC TRR WLT M +
Sbjct: 301 KLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQ 360
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR- 558
VS + G++ +R I+++FR G +VLITT++ ARGIDV+QV+ V+N+DLP +
Sbjct: 361 DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG 420
Query: 559 -----ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 421 EEPDYETYLHRIGRTGR 437
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 168 bits (409), Expect = 7e-41
Identities = 78/197 (39%), Positives = 127/197 (64%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R +R + + V+DEADEML+ GF D I + + ++ Q +L SATMP + ++ FM
Sbjct: 139 RTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFM 198
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+P + V+ +E+T+ I+QFY+ ++ E K +TL L D S A++F T+R+VD L
Sbjct: 199 TEPEHVKVKAKEMTVSNIQQFYLEVQ-ERKKFDTLTRLLDIQSPELAIVFGRTKRRVDEL 257
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
E+++ R + +HGD+ Q +R V +R+F+ G+ VL+ TD+ ARG+D+ V+ V N+D
Sbjct: 258 AEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFD 317
Query: 544 LPTNRENYIHRIGRGGR 594
+P + E+Y+HRIGR GR
Sbjct: 318 VPQDPESYVHRIGRTGR 334
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 166 bits (404), Expect = 3e-40
Identities = 79/197 (40%), Positives = 125/197 (63%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L AS + +LDEADEML+ GF++ I + L + Q +L SAT+ +L +++ F
Sbjct: 138 RTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVLFSATLAPPILALAKRFQ 197
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+P I ++++ELT+ ++QFY ++ + K E + + D ++ +IFCNT+RKV+ +
Sbjct: 198 NNPEIIKIERKELTISTVEQFYYLVKNSQ-KTEIVTQIIDLNNLQLMLIFCNTKRKVEEV 256
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + ++HGD QR+R +M +FR G + +L+ TD+ ARGIDV V VINYD
Sbjct: 257 TDELKAYGHNPISLHGDKTQRDRTEVMSKFRKGLANILVATDVAARGIDVTGVDAVINYD 316
Query: 544 LPTNRENYIHRIGRGGR 594
+P + ENY+HRIGR GR
Sbjct: 317 VPLDIENYVHRIGRTGR 333
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 166 bits (404), Expect = 3e-40
Identities = 79/195 (40%), Positives = 126/195 (64%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR ++ VLDEADEML+ GF + I + + Q +L SATMPD + ++ FM +
Sbjct: 140 LRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMPDPIRRIAERFMTE 199
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I V+ +E+T+ I+QFY+ ++ E+ K + L L D S A++F T+R+VD L+E
Sbjct: 200 PQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSE 258
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+++ R + +HGD+ Q +R ++R+F+ GS VL+ TD+ ARG+D+ V+ V N+D+P
Sbjct: 259 ALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIP 318
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 319 QDPESYVHRIGRTGR 333
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 165 bits (402), Expect = 5e-40
Identities = 77/195 (39%), Positives = 122/195 (62%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + IK +LDEADEML GF++ I + + + + Q +L SAT+P ++L++++ + +
Sbjct: 143 LSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTN 202
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + V K ELT ++Q Y ++ E+ KLE L L D +++FCNT+RKVD L
Sbjct: 203 PEIVKVTKHELTTPDVEQKYFEVK-EDMKLELLSRLLDLHDFDLSLVFCNTKRKVDKLVS 261
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R + +HGD+ Q +R+ +M +F+ G+ +L+ TD+ ARGIDV V V N+D+P
Sbjct: 262 HLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDVAARGIDVGGVEAVFNFDIP 321
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 322 NDNEYYVHRIGRTGR 336
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 165 bits (401), Expect = 7e-40
Identities = 78/192 (40%), Positives = 122/192 (63%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S IK V+DEADEM + GF DQI + K LS +LLSATMP + +S +M+DP+
Sbjct: 145 SQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLLSATMPSAIETLSNRYMKDPIH 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+++E ++ I Q +E + K++ L D+ + +IFCNT+++VD + + +
Sbjct: 205 AEIEEESSAVDRISQERYTVEYRD-KMKLLSDITIVENPDSCIIFCNTKQRVDEVNDELI 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
++T +HG M+QR+R +M +F+ G R L+ TD+ ARGID+ +S VINYD+P ++
Sbjct: 264 RLNYTCEKIHGGMEQRDRVRVMNEFKQGYFRYLVATDVAARGIDIDNISLVINYDIPQDK 323
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 324 ESYVHRIGRTGR 335
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 164 bits (398), Expect = 2e-39
Identities = 75/195 (38%), Positives = 122/195 (62%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S +++ VLDEADEML GF + I + + A+ Q +L SATMP ++ ++ +MRD
Sbjct: 144 LDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRD 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+ I V ++LT+ I Q++ + +K E L + D ++ + + FC T++ VD L E
Sbjct: 204 PITISVTPQQLTVPQIDQYFCEVR-PSFKTEALTRILDIENVERGICFCRTKKGVDELVE 262
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ R + +HGDM+Q +R +M +F+ G +L+ TD+ ARG+D+ V+ V NYD+P
Sbjct: 263 ALQARGYQAEGIHGDMNQAQRNRVMSRFKEGYIELLVATDVAARGLDISDVTHVFNYDIP 322
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 323 QDPESYVHRIGRTGR 337
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 163 bits (396), Expect = 3e-39
Identities = 76/195 (38%), Positives = 122/195 (62%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +++ VLDEADEML GF++ I + + VQ SATMPD +LE++R F+R+
Sbjct: 144 LQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAFFSATMPDGILELARRFLRE 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + V + +LT+ +Q + + +++ +C ++D +A++F T++ VD L
Sbjct: 204 PELLRVTRRQLTVANTEQAWFEVRPFR-RVDAVCRIFDAYIPRKAIVFRATKQGVDELAA 262
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ +R A+HGD++Q +RE +M +FR G VL+ TD+ ARG+DV V VIN+DLP
Sbjct: 263 ALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAARGLDVDDVDTVINFDLP 322
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 323 NDPETYVHRIGRTGR 337
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 162 bits (394), Expect = 5e-39
Identities = 75/195 (38%), Positives = 125/195 (64%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR + VLDEADEML+ GF + I + + A+ Q +L SATMPD + ++ FM +
Sbjct: 140 LRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNE 199
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + V+ +E+T+ I+Q+Y+ + E+ K + L L D + A++F T+R+VD L E
Sbjct: 200 PELVKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAE 258
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+++ R + +HGD+ Q +R ++R+F+ G+ +L+ TD+ ARG+D+ V+ V N+D+P
Sbjct: 259 ALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIP 318
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 319 QDPESYVHRIGRTGR 333
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 162 bits (393), Expect = 6e-39
Identities = 74/195 (37%), Positives = 120/195 (61%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + L VLDEAD+ML GF++ I ++ + + Q ++LSAT P ++L++SR F ++
Sbjct: 143 LLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTVILSATFPPEILDISRRFQKN 202
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+ + + +ELT+ I+Q+YI + E K +TL + + + +IFCNT+ VD ++
Sbjct: 203 PIDVKMVHQELTVPQIEQYYIEVR-EPAKADTLIRVLEFYQPQRTIIFCNTQIAVDAVSS 261
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ F +HG M Q +R+ +M FR G +LI TD+ ARGIDV+++ V N+D P
Sbjct: 262 ALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEILIATDVAARGIDVEEIDLVCNFDFP 321
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR R
Sbjct: 322 QDDEYYVHRIGRTAR 336
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 158 bits (383), Expect = 1e-37
Identities = 73/195 (37%), Positives = 120/195 (61%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S ++ VLDEAD ML GF D + ++ K + + L SATMP ++++++R FM++
Sbjct: 158 LDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKE 217
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ + K+ELT E +Q Y ++ E+ KL LC + D ++FC T+ +VD +++
Sbjct: 218 YIHVSTVKDELTTENAEQLYFEVD-EKDKLPLLCRIIDMNPDFYGIVFCQTKLEVDEISK 276
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + + +HGD Q +RE ++ +FR R+L+TTD+ ARGID+ ++ VINY +P
Sbjct: 277 KLLDLGYNADGLHGDYSQYQRERVLDKFRKKQLRILVTTDVAARGIDIDGLTHVINYSVP 336
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 337 RDPEYYVHRIGRTGR 351
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 157 bits (381), Expect = 2e-37
Identities = 76/193 (39%), Positives = 118/193 (61%)
Frame = +1
Query: 16 ASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 195
A+ IK+ +LDEADEML GF D I + L+ Q +L SAT+P + + + F+
Sbjct: 141 AAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYK 200
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ + E T+ I+Q Y + E K+E L + ++ QA++FC T+++VD + E +
Sbjct: 201 TVKLVGREKTVPAIRQVYYELPETE-KIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQL 259
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ R + +HGDM QRER ++ F+ G + +L+ TD+ ARG+D+ VS VIN+D+P N
Sbjct: 260 NFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQN 319
Query: 556 RENYIHRIGRGGR 594
E+YIHRIGR GR
Sbjct: 320 PESYIHRIGRTGR 332
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 156 bits (379), Expect = 3e-37
Identities = 83/192 (43%), Positives = 112/192 (58%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S LF++DEAD+MLSR FK I + L Q +L SAT P V E + P
Sbjct: 187 SDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYE 246
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I + EELTL+GI Q+Y +E E KL L L+ L I QA+IFCN+ +V+ L + +
Sbjct: 247 INLM-EELTLKGITQYYAFVE-ERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKIT 304
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ ++ H M Q+ER + +FR G R L+ +DLL RGID+Q V+ VIN+D P
Sbjct: 305 DLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTA 364
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 365 ETYLHRIGRSGR 376
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 156 bits (378), Expect = 4e-37
Identities = 81/207 (39%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 177
+R L I++ VLDEADE++++ G +Q + ++L +VQ +L SAT DDV E +
Sbjct: 283 SRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPNVQNVLFSATFNDDVQEFADR 342
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
F + +I ++KE++T++ I+Q Y+ + E+ K E L LYD L I Q+++FC + D
Sbjct: 343 FAPEANKIFLRKEDITVDAIRQLYLECDSEDQKYEALSALYDCLVIGQSIVFCKRKVTAD 402
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
+ E + V+++HGD +ER+ I+ FR G ++VLITT+++ARGID+ V+ V+N
Sbjct: 403 HIAERLISEGHAVASLHGDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPAVNMVVN 462
Query: 538 YDLP--------TNRENYIHRIGRGGR 594
YD+P + E YIHRIGR GR
Sbjct: 463 YDVPDLGPGGNGPDIETYIHRIGRTGR 489
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 155 bits (377), Expect = 6e-37
Identities = 73/186 (39%), Positives = 116/186 (62%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEADEML GF D+I ++F L + Q ++ SATMP+ + +++ + +P + + K
Sbjct: 145 VLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSATMPNGIRKLAEQILNNPKTVSITKS 204
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTV 396
E T I Q+Y ++ E + + L L D + + +IFC +++VD L + + F V
Sbjct: 205 ESTNSKITQYYYVVQERE-RDDALVRLIDYKNPEKCIIFCRMKKEVDRLVAHLTAQGFKV 263
Query: 397 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHR 576
S +HGDM+Q++REV +R F+ G + + TD+ ARG+DV V+ V NY +P + E+Y+HR
Sbjct: 264 SGLHGDMEQKQREVTIRAFKQGGIDIFVATDVAARGLDVNDVTHVFNYHIPFDSESYVHR 323
Query: 577 IGRGGR 594
IGR GR
Sbjct: 324 IGRTGR 329
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 155 bits (376), Expect = 7e-37
Identities = 72/197 (36%), Positives = 122/197 (61%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R ++ + VLDEADEML+ GF D + ++ K +S + +++L SAT+PD ++++++ +M
Sbjct: 139 RTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLLFSATLPDSIMKLAKNYM 198
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
R+ I V++++LT Q + I + K E L + D +IFC T+ VD +
Sbjct: 199 REYDIIKVKRQQLTTTLTDQSFYEIHSRD-KFELLSRIIDLEKEFYGLIFCKTKADVDEV 257
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ ++E+ + +HGDM Q +RE + +F+ VL+ TD+ ARGID+ ++ V+NYD
Sbjct: 258 SSRLNEKGYAAEGLHGDMTQAQREKTLDKFKGRKINVLVATDVAARGIDINDLTHVVNYD 317
Query: 544 LPTNRENYIHRIGRGGR 594
+P N E+Y+HRIGR GR
Sbjct: 318 IPQNPESYVHRIGRTGR 334
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 155 bits (375), Expect = 1e-36
Identities = 73/190 (38%), Positives = 117/190 (61%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ + VLDEAD+ML GF + D+ + Q + SATMP+ V ++ +M+DPV+I
Sbjct: 146 LSMLVLDEADQMLHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQIQ 205
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
VQ + +TL+ I+Q I + K + LC L+D + A+IFC T+R+ L E++
Sbjct: 206 VQSKRVTLDEIRQVVIETT-DRGKQDLLCQLFDEYNPFMAIIFCRTKRRAIALNEALINL 264
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ +HGD+ Q +RE +M+ F+ + L+ TD+ ARG+D++ V+ + NYD+P + E+
Sbjct: 265 GYNSDELHGDLTQAKREKVMKAFKKSKIQYLVATDVAARGLDIEGVTHIFNYDIPQDGES 324
Query: 565 YIHRIGRGGR 594
YIHRIGR GR
Sbjct: 325 YIHRIGRTGR 334
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 154 bits (373), Expect = 2e-36
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
++ V+DEAD ML GF I +FKM Q + SATMP ++ +++ F++DPVRI
Sbjct: 148 VQFLVVDEADRMLDMGFIPDIERIFKMTPPKKQTLFFSATMPPEITRLTKQFLKDPVRIE 207
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLC--DLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ T E I Q + + + K + L L + I ++FCN + +VD + +S+
Sbjct: 208 ASRPATTNENITQLMVKVPSSDPKAKRLALRALIEKAQIETGIVFCNRKTEVDVVAKSLK 267
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
F +A+HGD+DQ +R + FR GS ++L+ +D+ ARG+D+ VS V NYD+P +
Sbjct: 268 SHGFDAAAIHGDLDQSQRTKTLAAFRDGSLKILVASDVAARGLDIPAVSHVFNYDVPHHA 327
Query: 559 ENYIHRIGRGGR 594
++Y+HRIGR GR
Sbjct: 328 DDYVHRIGRTGR 339
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 153 bits (371), Expect = 3e-36
Identities = 71/192 (36%), Positives = 115/192 (59%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +K+ LDEADEML GF++ + + K + + Q +L SAT+P + +++ + +D
Sbjct: 145 SALKILTLDEADEMLKMGFQEALETILKKIPEERQTVLFSATLPPFIKKIASKYQKDTKI 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V + + + I+Q Y ++ E K + L L D A++F NT++ VD +T +
Sbjct: 205 LQVPVKNIAVNAIEQNYFLVK-EVDKAKLLVRLLDLKKDYSAILFANTKKDVDEITAYLQ 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
++ F A+HGD+ Q +R+ +M FR G ++LI TD+ ARG+D+ + VINYDLP
Sbjct: 264 DKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAARGLDISDIKMVINYDLPHED 323
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 324 EVYVHRIGRTGR 335
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 153 bits (371), Expect = 3e-36
Identities = 81/195 (41%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR IK VLDEADEML GFK + VF+ Q +L SATMP VLE++ + +
Sbjct: 139 LRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLLFSATMPKQVLEIANNYQTN 198
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV I+V K + I Q Y+ + K + L LY L +++IF NT+ + + E
Sbjct: 199 PVEIVVTKNVIEQNNISQHYVNA-ISYHKEDVLIALYKHLQPKRSIIFSNTKVFTNKIAE 257
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ ++GD + ER MR FR G RV++ TD+ ARGID+ + VINYD+P
Sbjct: 258 MLTNNGIPCCIINGDKSRYERGQAMRLFRDGKVRVMVATDVAARGIDIDNIDYVINYDIP 317
Query: 550 TNRENYIHRIGRGGR 594
T RE+YIHRIGR R
Sbjct: 318 TERESYIHRIGRTAR 332
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 153 bits (371), Expect = 3e-36
Identities = 75/190 (39%), Positives = 115/190 (60%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ V+DEADEML+ GF +Q+ + K L + +L SAT+P D+ ++SR +M++P I
Sbjct: 145 LSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIE 204
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V+ LT I+ I + EE K L D+ T + +IFC T+ V+ LT+ + +
Sbjct: 205 VKAAGLTTRNIEHAVIQVR-EENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDL 263
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ +HG M Q +R +M +F+ G R L+ TD+ ARGID++ +S VINYDLP +E+
Sbjct: 264 GYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEKES 323
Query: 565 YIHRIGRGGR 594
Y+HR GR GR
Sbjct: 324 YVHRTGRTGR 333
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 153 bits (371), Expect = 3e-36
Identities = 86/206 (41%), Positives = 119/206 (57%), Gaps = 9/206 (4%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
R S +KL V+DEAD ML + G +Q V ML +Q +L SAT PD V + F
Sbjct: 232 RQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQTLLFSATFPDHVKSYAEKF 291
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
++ ++++ELT++GI Q Y+ + K E LC LY ++I +VIF TR D
Sbjct: 292 APQANQMKLRQQELTVKGISQMYMDCPSLKEKYEVLCKLYGLMTIGSSVIFVKTRESADE 351
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ M VSA+HG +ER+ ++ FR+G S+VLITT++LARGIDV VS VINY
Sbjct: 352 IQRRMEADGHKVSALHGAFQGQERDQLLDDFRSGKSKVLITTNVLARGIDVSSVSMVINY 411
Query: 541 DLP--------TNRENYIHRIGRGGR 594
D+P + E Y+HRIGR GR
Sbjct: 412 DIPMKGPGDQSPDAETYLHRIGRTGR 437
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 153 bits (370), Expect = 4e-36
Identities = 78/197 (39%), Positives = 114/197 (57%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R ++ ++ VLDEAD ML GF + + + + + L SAT+ +V+++S +
Sbjct: 149 RTVKLDKVETVVLDEADRMLDMGFIHDVTRILDQIKSRKNLGLFSATISREVMDISWVYQ 208
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
RDPV I+V+ +E I+Q+ I +E KLET+ L +A+ FCNT+ D L
Sbjct: 209 RDPVEIVVRPDEENKPDIQQYRIDLEGRGDKLETMVALLTHGGYERAIAFCNTKNMTDRL 268
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + R T A+HGD+ QR RE ++ FR G RVL+ TD+ ARG+D+ V V NYD
Sbjct: 269 SGLLQMRGITAQAIHGDIQQRIREKTLQAFREGKMRVLVATDVAARGLDIDDVDVVFNYD 328
Query: 544 LPTNRENYIHRIGRGGR 594
+P E YIHRIGR GR
Sbjct: 329 VPDEIEYYIHRIGRTGR 345
>UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 07 contig 1, DNA
sequence - Ostreococcus tauri
Length = 506
Score = 152 bits (369), Expect = 5e-36
Identities = 77/190 (40%), Positives = 118/190 (62%)
Frame = -3
Query: 594 TTTSSDSMNVVFAISG*IIIDDTRDLLHVDTASQ*VGGDEHTRRTSTELPHDHLAFTLVH 415
T ++D++ VVF + G + +D R+LL VDT S+ V GD+HT R EL HD + L+H
Sbjct: 82 TAGTTDTVKVVFGLRGQVKVDHQRNLLDVDTTSKQVSGDQHTGRAGAELAHDDVTGVLIH 141
Query: 414 VTVHGRHGEVALMHRLGQPVYLTTGVAENNSLCNRECVI*ITQCFQFPFF*LNGNVELFN 235
+TV G GE+A H + +PV LTT V E+N L N E + I + Q P F ++ +VEL N
Sbjct: 142 ITVRGGDGEIAGTHVVREPVNLTTSVREDNGLRNGERFVQIAERVQLPLFLVDVDVELLN 201
Query: 234 TFQCKLLLLDKDPYRISHEATRHFQYIIRHCSRK*NNLNISRQHLENIMDLIFESSR*HF 55
TF+ + + LD++ +R+ HE R + + R + NLN+ R+ E+++DLI E+S HF
Sbjct: 202 TFKGEFVTLDQNAHRLGHELARDLERLRRKRRGENTNLNLRREQGEDVVDLILETSGKHF 261
Query: 54 ISFI*HEELD 25
I F+ ++LD
Sbjct: 262 IGFVKSKDLD 271
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 151 bits (366), Expect = 1e-35
Identities = 73/192 (38%), Positives = 115/192 (59%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + FVLDEAD ML GF D I ++K L + Q ++ SATMP + +++ +RDP+
Sbjct: 148 SHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIE 207
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + ++ YI E + KL L L++ + + +IF + + KV LT ++
Sbjct: 208 VEIAISRPPESIMQSAYICHEAQ--KLPILRKLFEQSAPKRTIIFASAKLKVRELTSTLR 265
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ F V+ MH D++Q +RE +MR F+ G VL+ TD++ARGID+ + VINYD+P +
Sbjct: 266 KMGFNVADMHSDLEQSQREQVMRDFKNGYVDVLVATDIVARGIDIDNIRVVINYDIPHDP 325
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR R
Sbjct: 326 EDYVHRIGRTAR 337
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 151 bits (365), Expect = 2e-35
Identities = 73/195 (37%), Positives = 117/195 (60%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S +K VLDEADEML GF + + +V + L A QV L SATMP + +++ +++D
Sbjct: 154 LDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQD 213
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+ + + + T I+Q Y + KL+ L + + + +IF T+ + L E
Sbjct: 214 PIEVTIATKTTTAANIRQRYWWVSGLH-KLDALTRILEVETFDAMIIFVRTKAATEELAE 272
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R T +A++GDM Q +RE + Q + G +L+ TD+ ARG+DV+++S V+NYD+P
Sbjct: 273 KLQARGLTAAAINGDMQQAQRERTIHQLKDGKLDILVATDVAARGLDVERISHVLNYDIP 332
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 333 YDVESYVHRIGRTGR 347
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 150 bits (364), Expect = 2e-35
Identities = 76/192 (39%), Positives = 112/192 (58%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +K VLDEAD+ML GF D+I V + L Q +L SAT P+ + +SR + R +
Sbjct: 189 SAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQ 248
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
++++ EE L I+Q E + K L + +IFCNT+ V + E ++
Sbjct: 249 VIIEDEEQNL--IEQLVYDSEDND-KTNVLMRILQQHPSDSTIIFCNTKNAVAEIAERLN 305
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ +HGDM+QRER+ +M FR GS R+L+ TD+ ARG+D+ + VIN+DLP +
Sbjct: 306 DLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAARGLDIDNLELVINFDLPLSP 365
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 366 EIYVHRIGRTGR 377
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 150 bits (364), Expect = 2e-35
Identities = 73/195 (37%), Positives = 116/195 (59%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S ++ F+LDEADEML+ GF + I +F + D +V++ SATMP +L ++ FM
Sbjct: 185 LELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIASTFMGS 244
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ E I+QF + + K+E L L D ++FC T+ D + +
Sbjct: 245 YEVVEEVTPEEARPLIEQFMWVVRDAD-KIEALVRLIDVSDNFYGLVFCQTKADADTVAK 303
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
S+ ER + V+A+HGD+ Q +RE I+ +FRT +R+L+ TD+ ARGID++ ++ V+NY +P
Sbjct: 304 SLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARGIDIEGITHVVNYSIP 363
Query: 550 TNRENYIHRIGRGGR 594
+ Y HR+GR GR
Sbjct: 364 HDSATYTHRVGRTGR 378
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 150 bits (364), Expect = 2e-35
Identities = 72/197 (36%), Positives = 112/197 (56%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ + +++ VLDEAD ML GF + + +L Q +L SAT ++ ++++ FM
Sbjct: 164 KSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFM 223
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P I V + T E IKQ A++ EE K +C L + +++Q ++F NT+ L
Sbjct: 224 VSPTLIEVARRNATSENIKQVIFALDSEEDKRMAVCHLIQSKALSQVIVFSNTKLGTARL 283
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + + +A+HGD Q ER + F+ G VL+ TD+ ARG+D+ + CVINYD
Sbjct: 284 ARHLEKEGVSSTAIHGDKTQIERTKSLEAFKAGEVTVLVATDVAARGLDIADLPCVINYD 343
Query: 544 LPTNRENYIHRIGRGGR 594
LPT E+Y+HRIGR GR
Sbjct: 344 LPTTPEDYVHRIGRTGR 360
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 149 bits (362), Expect = 4e-35
Identities = 74/195 (37%), Positives = 122/195 (62%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ ++ VLDEADEML GF D + V +S + Q +L SAT+P D+ ++ ++R+
Sbjct: 148 LQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRN 207
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P +I V+ + T + Q +I I+ K++ L L +T +IF T+ +T+
Sbjct: 208 PCKIQVKAKTKTANTVTQKFIVIKGFR-KIDALDRLLETEETDGVIIFVKTKTSTIEVTD 266
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ + V+A++GDM Q +RE I+ QFR+ S +L+ TD++ARGID++++S VINYD+P
Sbjct: 267 NLKALGYKVAAINGDMQQSQREYIVDQFRSAKSDILVATDVVARGIDLERISHVINYDMP 326
Query: 550 TNRENYIHRIGRGGR 594
+ + Y+HRIGR GR
Sbjct: 327 NDTDTYVHRIGRTGR 341
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 149 bits (360), Expect = 6e-35
Identities = 73/196 (37%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR + + VLDEAD ML GF+ QI + + + Q +LLSAT+P V ++ +M +
Sbjct: 184 LRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLLLSATLPPVVRRLAESYMHE 243
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV I ++E+ ++ I+Q Y I ++ K+ L L QA+IFC T+R D L
Sbjct: 244 PVVIDCCRDEMAVDTIEQRYFTIAQDD-KVRLLESLLKREKPEQAIIFCRTKRGTDRLHR 302
Query: 370 SM-HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ HE A+HGD+ QRER+ ++++ R G+ + L+ TD++ RGID+ +S ++N+D+
Sbjct: 303 KLSHEYGSACGAIHGDLQQRERDRVLQKLRDGNLKFLVATDVVGRGIDISTISHIVNFDV 362
Query: 547 PTNRENYIHRIGRGGR 594
P + ++Y+HR+GR GR
Sbjct: 363 PQDCDDYVHRVGRTGR 378
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 149 bits (360), Expect = 6e-35
Identities = 74/195 (37%), Positives = 115/195 (58%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K FVLDEADEML GF D I + + + Q+ L SATMP+ + ++++ F+
Sbjct: 151 LKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFSATMPNVIKKIAKQFLNQ 210
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I ++ + T I Q Y + KLE L + + +IF T+ LTE
Sbjct: 211 PKIIKIKTKTETATTITQKYCMVGGLSNKLEALTRILEVTVFDAMIIFVRTKTLTTELTE 270
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R F+ A++GD+ Q +RE I+ ++ G +LI TD+ ARG+DV+++S V+NYD+P
Sbjct: 271 KLSARGFSADAINGDIQQNQRERIINDYKQGKIDILIATDIAARGLDVERISHVVNYDIP 330
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 331 QDAESYVHRIGRTGR 345
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 148 bits (359), Expect = 9e-35
Identities = 73/195 (37%), Positives = 115/195 (58%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L I+ VLDEAD ML GF DQ+ + K L + +L SATMP ++ + + +M +
Sbjct: 141 LSTKNIRFLVLDEADRMLDMGFLDQVVRIVKTLPKERITLLFSATMPPEIHNICKRYMNN 200
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV I ++ + T++ I Q Y + E K L L +IFCNT+ VD +
Sbjct: 201 PVTIEIESQTKTVDTIHQVYYRVNYNE-KNTQLNRLLIVEKPESCMIFCNTKAAVDRVQS 259
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ ++ ++ A+HGD+ Q +R ++QF+ G +L+ TD+ ARGI ++ +S VINYD+P
Sbjct: 260 FLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVATDVAARGIHIEDLSLVINYDVP 319
Query: 550 TNRENYIHRIGRGGR 594
+++NY+HRIGR GR
Sbjct: 320 NDKDNYVHRIGRTGR 334
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 148 bits (359), Expect = 9e-35
Identities = 71/190 (37%), Positives = 115/190 (60%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
I V DEAD M GF I + KML Q +L SAT P +V+ + ++DP+RI
Sbjct: 149 IDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQ 208
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
++++ T I Q I ++ ++ K+E L +++ SI QA++F T+R D + +H
Sbjct: 209 IEEQNSTALNIIQRVILVDRDK-KMELLNEVFGVESIDQALVFTRTKRSADKCSSYLHTL 267
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
F+V+A+HGD Q R + +F+ G +++L+ TD+ ARG+D++++ VIN +LP E+
Sbjct: 268 GFSVAALHGDKSQSVRSKTLEKFKNGKTKILVATDIAARGLDIKELPFVINLELPNVPED 327
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 328 YVHRIGRTGR 337
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 148 bits (359), Expect = 9e-35
Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
+ L ++ F+LDE D+ML S + + ++FKM D QV++ SAT+ ++ V + F
Sbjct: 184 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 243
Query: 181 MRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
M+DP+ I V E +LTL G+ Q YI + E K L DL D L Q VIF + +
Sbjct: 244 MQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KTRKLNDLLDALDFNQVVIFVKSVSRAA 302
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L + + E +F +H M Q ER + F+ G R+L+ TDL+ RGID+++V+ VIN
Sbjct: 303 ELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVIN 362
Query: 538 YDLPTNRENYIHRIGRGGR 594
YD+P + + Y+HR+GR GR
Sbjct: 363 YDMPDSADTYLHRVGRAGR 381
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 148 bits (358), Expect = 1e-34
Identities = 75/195 (38%), Positives = 115/195 (58%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L +K F+LDEADEML+ GF + + + D +++L SATMP ++L +++ +M D
Sbjct: 143 LNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGD 202
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
I K ++ I+Q Y+ + E + E LC L ++FC T+R L
Sbjct: 203 YSFI---KAKINAN-IEQSYVEVNENE-RFEALCRLLKNKEF-YGLVFCKTKRDTKELAS 256
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + F A+HGD+ Q +RE ++R F+ R+LI TD+++RGIDV ++CVINY LP
Sbjct: 257 MLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVMSRGIDVNDLNCVINYHLP 316
Query: 550 TNRENYIHRIGRGGR 594
N E+Y+HRIGR GR
Sbjct: 317 QNPESYMHRIGRTGR 331
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 147 bits (357), Expect = 1e-34
Identities = 74/198 (37%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L ++ VLDEAD ML GF++ I ++ Q +L SAT PD + ++R +
Sbjct: 164 RALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREIL 223
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEE-WKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
+DP+ I V+ + E +QF+ E++ ++ + + L + +V+FCNTR++VD
Sbjct: 224 KDPIEITVEGADNAPEIDQQFF---EVDPTYRQKAVAGLLLRFTPESSVVFCNTRKEVDE 280
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ S+ E F+ A+HGDM+QR+R+ ++ +F S VL+ +D+ ARG+DV+ +S V+NY
Sbjct: 281 VAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNY 340
Query: 541 DLPTNRENYIHRIGRGGR 594
+LPT+ E Y HRIGR R
Sbjct: 341 ELPTDTETYRHRIGRTAR 358
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 147 bits (356), Expect = 2e-34
Identities = 78/195 (40%), Positives = 107/195 (54%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K FVLDEADEMLS GF D + + D Q L SATMP + + F+R
Sbjct: 141 LKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRS 200
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV + V++ + T I Q I K L + + A+IF TRR LT
Sbjct: 201 PVTVTVEQPKATPNKINQVAYLIPRHWTKARALQPILEMEDPETALIFVRTRRTAAELTS 260
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ +V HGD+ Q+ RE ++ +FR+ R ++ TD+ ARG+DV Q+S VINYDLP
Sbjct: 261 QLQAAGHSVDEYHGDLSQQARERLLTRFRSRQVRWVVATDIAARGLDVDQLSHVINYDLP 320
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 321 DSVETYVHRIGRTGR 335
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 147 bits (356), Expect = 2e-34
Identities = 72/186 (38%), Positives = 112/186 (60%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF D I + + + + L SATMP ++L +S ++++P + L+ +
Sbjct: 148 VLDEADTMLDMGFIDDIQFILDLTPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDAD 207
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTV 396
+L+ EGI Q Y+ I E K++ L D Q ++FC+T+ + + +H+R++
Sbjct: 208 DLSGEGIDQSYLVIRDRE-KMDYLVDFIKENGKGQTIVFCSTKYRTRDVARMLHKRNYGA 266
Query: 397 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHR 576
A+ GDM Q RE M +FRT +++L+ TD+ ARGIDV +V+ V+NYD+P Y HR
Sbjct: 267 VAIEGDMSQHRREQSMSRFRTAKAQILVATDVAARGIDVPRVALVVNYDVPNQEMIYFHR 326
Query: 577 IGRGGR 594
IGR R
Sbjct: 327 IGRTAR 332
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 147 bits (356), Expect = 2e-34
Identities = 80/202 (39%), Positives = 121/202 (59%), Gaps = 7/202 (3%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
++ IK+FVLDEAD ML + G DQ V + L D Q++L SAT D V + ++ +
Sbjct: 228 MQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVP 287
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + +Q E+ ++ IKQ Y+ + E K + L +LY ++I ++IF T++ + L
Sbjct: 288 NANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSSIIFVATKKTANVLY 347
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ VS +HGD+ +ER+ ++ FR G S+VLITT++LARGID+ VS V+NYDL
Sbjct: 348 GKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDL 407
Query: 547 PT------NRENYIHRIGRGGR 594
PT + YIHRIGR GR
Sbjct: 408 PTLANGQADPATYIHRIGRTGR 429
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 147 bits (355), Expect = 3e-34
Identities = 77/190 (40%), Positives = 112/190 (58%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
I VLDEADEML+ GF D I + + Q +L SAT+ +L ++R +MR+P +
Sbjct: 146 ISTVVLDEADEMLNMGFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYMRNPQVMR 205
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V+K+ I +FY EE K+E L + + +I +IFCNT+R+V L ++
Sbjct: 206 VEKKHSPK--IDEFYFKTR-EEDKVELLDWILSSNNIRMGLIFCNTKRRVQRLRRQLNRM 262
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
++ +HGD+ Q +RE +M +FR G +L+ TD+ ARGI V V V+NYDLP E
Sbjct: 263 GYSADEIHGDLSQSKRERVMERFRRGDFSLLVATDVAARGIHVPDVEAVVNYDLPFENEY 322
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 323 YVHRIGRTGR 332
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 145 bits (352), Expect = 6e-34
Identities = 70/189 (37%), Positives = 113/189 (59%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILV 207
++ VLDE+DEML GF D I ++FK L Q +L SATMP+ + ++ + +P + +
Sbjct: 188 QIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKILNEPAFVKI 247
Query: 208 QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
++T + I+Q Y I E + E + L +T + +++IF +++ D L + R
Sbjct: 248 TPTDVTNQDIEQQYYIINEGE-RDEAIVRLIETQNPTKSIIFTRMKKEADALAIRLANRG 306
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 567
F A+HGDM+QR+R ++ FR +L+ TD+ +RG+D+ VS V NY +P N E+Y
Sbjct: 307 FKAIALHGDMEQRDRREAIKAFRENKIEILVATDVASRGLDISDVSHVFNYHIPLNPESY 366
Query: 568 IHRIGRGGR 594
+HRIGR GR
Sbjct: 367 VHRIGRTGR 375
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 145 bits (352), Expect = 6e-34
Identities = 76/188 (40%), Positives = 109/188 (57%)
Frame = +1
Query: 31 LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQ 210
+FV+DEAD++LS F I + + QV+L SAT P V E M P I +
Sbjct: 182 VFVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLM 241
Query: 211 KEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDF 390
+ELTL+G+ Q+Y +E E K+ L L+ L I Q++IFCN+ +V+ L + + E +
Sbjct: 242 -DELTLKGVTQYYAYVE-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGY 299
Query: 391 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
+ H M Q R + FR G +R L+ +DLL RGID+Q V+ VIN+D P E+Y+
Sbjct: 300 SCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYL 359
Query: 571 HRIGRGGR 594
HRIGR GR
Sbjct: 360 HRIGRSGR 367
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 145 bits (351), Expect = 8e-34
Identities = 71/197 (36%), Positives = 115/197 (58%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ + + +++ VLDEAD ML GF D I + +ML Q +L SAT + ++++ FM
Sbjct: 173 KNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFM 232
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P + V + T ++Q IA++ + K L L L + Q ++FC T++ VD +
Sbjct: 233 NAPETVEVAAQNTTNANVEQHIIAVDTIQ-KRNLLERLIVDLHMNQVIVFCKTKQSVDRV 291
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T + R+ + A+HGD Q+ R + F+ GS RVL+ TD+ ARG+D+ ++ VINY+
Sbjct: 292 TRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYE 351
Query: 544 LPTNRENYIHRIGRGGR 594
+P E+Y+HRIGR GR
Sbjct: 352 MPAQPEDYVHRIGRTGR 368
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 144 bits (350), Expect = 1e-33
Identities = 73/195 (37%), Positives = 109/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L +K V+DEADEML+ GF DQ+ + L +L SAT+P+DV +SR +M
Sbjct: 142 LSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNA 201
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I ++ +T + I+ + EE KL L D+ + +IFC T+ VD +
Sbjct: 202 PTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDVTTIENPDSCIIFCRTQENVDHVYR 260
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ ++ +HG M Q +R +M FR G R L+ TD+ ARGID+ ++ VINYD+P
Sbjct: 261 QLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIP 320
Query: 550 TNRENYIHRIGRGGR 594
+E+Y+HR GR GR
Sbjct: 321 LEKESYVHRTGRTGR 335
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 144 bits (349), Expect = 1e-33
Identities = 68/195 (34%), Positives = 116/195 (59%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + +K F+LDEADEML GF + + + + L Q+ L SATMP + +++ ++ D
Sbjct: 145 LLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMALFSATMPYRIRQIANTYLND 204
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I ++ E T++ I+Q ++ + + K + L + + ++F T+ + + E
Sbjct: 205 PASIEIRMETATVKSIEQRFLFASVHQ-KPDALIRVLEVEDYQGVIVFVRTKSSTEEVAE 263
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + A+HGD+ Q RE I+ QF+ G+ +L+ TD+ ARG+DV++V+ VINYD+P
Sbjct: 264 LLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILVATDVAARGLDVERVTHVINYDMP 323
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 324 HDNETYVHRIGRTGR 338
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 144 bits (349), Expect = 1e-33
Identities = 74/195 (37%), Positives = 119/195 (61%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+R S I++ VLDEAD+ML GF D+ + K L Q +L SAT+ V ++R +++D
Sbjct: 140 VRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLLFSATLSPPVQMLARKYLKD 199
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I ++E +T+ Q+YI + E+ K E L L D A++F TR +V L +
Sbjct: 200 PELIEFEEEGITVPTTVQYYIEMP-EKQKFEALTRLLDQEKPELAIVFVATRIRVGELAK 258
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ ER + +HGD+ Q +RE + +F+ G +L+ TD+ ARG+D+Q V+ V N+D+P
Sbjct: 259 ALVERGYHALGLHGDLLQYQRENTLDKFKAGEVSILVATDVAARGLDIQGVTHVYNFDIP 318
Query: 550 TNRENYIHRIGRGGR 594
+ ++Y+HRIGR GR
Sbjct: 319 RDPDSYVHRIGRTGR 333
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 144 bits (348), Expect = 2e-33
Identities = 74/198 (37%), Positives = 109/198 (55%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
+ GL+ +++ VLDEAD ML GF + I + L Q + SATMP D+ E++
Sbjct: 156 SNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIAELADSM 215
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
+RDP R+ V T E I Q + ++ K L L I +A++F T+ D
Sbjct: 216 LRDPARVAVTPVSSTAERINQRILQVDFSA-KPAFLTKLLKDEPINRALVFTRTKHGADK 274
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ +++ + SA+HG+ Q RE + QFR+G R L+ TD+ ARGIDV ++ VIN+
Sbjct: 275 VVKTLEKAGIAASAIHGNKSQNHRERTLAQFRSGDIRTLVATDIAARGIDVDGITHVINF 334
Query: 541 DLPTNRENYIHRIGRGGR 594
DLP E Y+HRIGR R
Sbjct: 335 DLPNVPETYVHRIGRTAR 352
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 144 bits (348), Expect = 2e-33
Identities = 74/199 (37%), Positives = 120/199 (60%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L ++K+ VLDEAD ML GF D I DV +D Q +L SAT P ++ ++S
Sbjct: 141 QSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLFSATYPQEIEQISARVQ 200
Query: 184 RDPVRILVQK--EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
R P R + EE +E ++FY + + +L L + A V+FCNT+R
Sbjct: 201 RQPQRFEIADDVEESAIE--QRFYETTK--DQRLPLLIAILSHYQPASCVVFCNTKRDCQ 256
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
+ E++ R +VSA+HGD++QR+R+ ++ +F S RVL+ TD+ ARG+D+++++ V+N
Sbjct: 257 SVFEALEMRGISVSALHGDLEQRDRDQVLVRFSNRSCRVLVATDVAARGLDIKELALVVN 316
Query: 538 YDLPTNRENYIHRIGRGGR 594
++L + E ++HRIGR GR
Sbjct: 317 FELAFDPEVHVHRIGRTGR 335
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 144 bits (348), Expect = 2e-33
Identities = 77/195 (39%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ + VLDEADEML GF D + V D Q + SAT+PD++ + ++ D
Sbjct: 148 LKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQRVFFSATLPDEISRIVNHYLVD 207
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+RI ++ + T EGI+Q + IE KLE L L + + A++F TR L E
Sbjct: 208 PLRIAIETKTKTAEGIEQRLVRIEGGA-KLEALSRLLEVEPVDAAIVFVRTRAACTTLVE 266
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R +A+ GD+DQ RE + + + G VLI TD+ ARG+DV +++ V NYDLP
Sbjct: 267 QLLLRGVNAAALSGDLDQSLRERTVERLKRGKVDVLIATDVAARGLDVPRITHVFNYDLP 326
Query: 550 TNRENYIHRIGRGGR 594
+ E Y HRIGR GR
Sbjct: 327 QDAEAYTHRIGRTGR 341
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 144 bits (348), Expect = 2e-33
Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 5/191 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + D Q ++ SAT P +V +++ F+ + ++I +
Sbjct: 433 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSL 492
Query: 217 ELTLE-GIKQFYIAIE--LEEWKLETLC-DLYDTL-SIAQAVIFCNTRRKVDWLTESMHE 381
EL+ I+Q + +E KL+TL D+YDT S + +IF T+R+VD L +
Sbjct: 493 ELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRS 552
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
A+HGD Q ER+ ++R+FR+G S +L+ TD+ ARG+DV + VIN+D P N E
Sbjct: 553 FGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSE 612
Query: 562 NYIHRIGRGGR 594
+YIHRIGR GR
Sbjct: 613 DYIHRIGRTGR 623
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 143 bits (347), Expect = 2e-33
Identities = 67/197 (34%), Positives = 116/197 (58%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L+ ++ VLDEAD ML GF+ I + + + Q +LLSAT+P + ++++ +M
Sbjct: 142 RALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYM 201
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
R+P ++ ++ E I+Q Y ++ + K + L +L +A++FC T+R + +
Sbjct: 202 RNPEKVDFSPTNISAETIEQRYFTVDHSK-KFDMLVELLKREQPQKAIVFCRTKRGTERI 260
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + ++ V +HGDM Q R + F+ RVL+ TD++ RGID+ VS +INYD
Sbjct: 261 TQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLVATDVVGRGIDISDVSHIINYD 320
Query: 544 LPTNRENYIHRIGRGGR 594
+P ++Y+HR+GR GR
Sbjct: 321 IPEFSDDYVHRVGRTGR 337
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 143 bits (346), Expect = 3e-33
Identities = 72/198 (36%), Positives = 117/198 (59%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR + VLDEADEML GF + I + + Q +L SAT+P + +++R +RD
Sbjct: 198 LRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRD 257
Query: 190 PVRILVQK---EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
PVRI + + E ++Q + +K L + D S A++FC TR +VD
Sbjct: 258 PVRIQIGRAAPEPGAAPLVRQVSYVVP-RAYKTAALGRILDVESPRSAIVFCRTREEVDQ 316
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
L +S++ R + ++HG M Q +RE +M + RT ++ +L+ TD+ ARG+D +Q++ V+NY
Sbjct: 317 LADSLNGRGYRAESLHGGMSQEQRERVMERLRTATADLLVATDVAARGLDFEQLTHVVNY 376
Query: 541 DLPTNRENYIHRIGRGGR 594
+P+ ++Y+HRIGR GR
Sbjct: 377 SVPSAPDSYVHRIGRVGR 394
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 142 bits (345), Expect = 4e-33
Identities = 73/197 (37%), Positives = 110/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L +++FVLDEAD+ML GF + + K+L + Q + SATMP + E+S F+
Sbjct: 147 RALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQFL 206
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DPV + V + T E ++QF I + E + L +T + +A++F T+ D +
Sbjct: 207 SDPVTVSVAPQSSTAERVEQFGIFVNQSEKQALLTITLKNTPGLDRALVFTRTKHGADRV 266
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ +A+HG+ Q +RE + FR G ++L+ TD+ ARGIDV VS V NY+
Sbjct: 267 VRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDIAARGIDVPGVSHVFNYE 326
Query: 544 LPTNRENYIHRIGRGGR 594
LP E Y+HRIGR R
Sbjct: 327 LPNVAEQYVHRIGRTAR 343
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 142 bits (344), Expect = 6e-33
Identities = 74/195 (37%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ I + VLDE D ML G K+Q+ ++ K L QV++ SATMP ++ VS+ ++ +
Sbjct: 139 LKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIAVSQKYLNN 198
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PVRI V IKQ + + +E K L +IF T+R D L +
Sbjct: 199 PVRITVGATNKAAAEIKQESMHVSDKE-KFSALTKQLGNRE-GSVIIFVKTKRSADQLAK 256
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + T A+HGD+ QR+RE ++ FR + R+++ TD+ ARG+D+ VINYDLP
Sbjct: 257 MLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDVAARGLDIPHTQHVINYDLP 316
Query: 550 TNRENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 317 MCPEDYLHRIGRTGR 331
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 142 bits (344), Expect = 6e-33
Identities = 73/195 (37%), Positives = 114/195 (58%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S IK VLDEADEML GF D + + + Q L SATMP + ++ ++RD
Sbjct: 146 LDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTALFSATMPSAIKRIATTYLRD 205
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I V + T + I+Q Y + + KL+ L + + + +IF T+ + L
Sbjct: 206 PDLITVAAKTGTADNIRQRYWLVSGMQ-KLDALTRILEAENFDGMIIFARTKLGTEELAS 264
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R F+ +A++GD+ Q++RE ++Q + G +L+ TD+ ARG+DV+++S VINYD+P
Sbjct: 265 KLQARGFSAAAINGDIQQQQRERTIQQLKDGKIDILVATDVAARGLDVERISHVINYDVP 324
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y HRIGR GR
Sbjct: 325 HDPESYTHRIGRTGR 339
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 142 bits (344), Expect = 6e-33
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 21/213 (9%)
Frame = +1
Query: 19 STIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVLEVSRCFMR 186
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+ + ++
Sbjct: 762 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIK 821
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V WL
Sbjct: 822 NAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLY 881
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
E+M R V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDL
Sbjct: 882 ENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDL 941
Query: 547 P-----------------TNRENYIHRIGRGGR 594
P + E Y+HRIGR GR
Sbjct: 942 PIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGR 974
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 142 bits (344), Expect = 6e-33
Identities = 72/199 (36%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
+ L IK F+LDE D+ML + + + ++F+M + QV++ SAT+ ++ V R F
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242
Query: 181 MRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
M+DP+ I V E +LTL G++Q+Y+ ++ E K L DL D L Q VIF + ++
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCI 301
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L + + E++F A+H M Q ER +QF+ R+L+ T+L RG+D+++V+ N
Sbjct: 302 ALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN 361
Query: 538 YDLPTNRENYIHRIGRGGR 594
YD+P + + Y+HR+ R GR
Sbjct: 362 YDMPEDSDTYLHRVARAGR 380
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 142 bits (343), Expect = 7e-33
Identities = 69/195 (35%), Positives = 112/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K VLDEADEML GF D + + Q L SATMP + +V++ ++++
Sbjct: 163 LKLDGLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQRALFSATMPPQIKKVAQTYLKN 222
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ ++ E T+E I QF + + E KL+ L + + ++IF T+ + L E
Sbjct: 223 ATEVRIESETRTVERIAQFVLPVYAER-KLDALTRILEVEPFDASIIFVRTKAETTMLAE 281
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R V+ + GD++QR+RE + + G ++I TD+ ARG+DV +++ VINYD+P
Sbjct: 282 KLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIATDVAARGLDVPRITHVINYDVP 341
Query: 550 TNRENYIHRIGRGGR 594
+ E YIHR+GR GR
Sbjct: 342 YDTEAYIHRVGRTGR 356
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 142 bits (343), Expect = 7e-33
Identities = 72/191 (37%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
I + +LDEAD ML GF+ Q+ D+ + D Q ILLSAT P++V ++S+ F DP+ +
Sbjct: 224 ITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKEFCYDPILVK 283
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESMHE 381
+ K I Q I +E KL L ++ D L V IF T+++ + L++S+ +
Sbjct: 284 IGKGA----PITQKIICTGQKE-KLHVLMNVLDDLIYTDKVLIFAETKKRCEDLSQSLTK 338
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ + ++HGD Q +R+ IM+QF+ ++R++ TD+ +RG+DV+ ++ V+NYD P + +
Sbjct: 339 QGYFCISLHGDKSQDQRDAIMKQFKDSNTRLICATDIASRGLDVKDITVVVNYDFPKSFD 398
Query: 562 NYIHRIGRGGR 594
+YIHRIGR GR
Sbjct: 399 DYIHRIGRTGR 409
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 141 bits (342), Expect = 1e-32
Identities = 71/198 (35%), Positives = 117/198 (59%), Gaps = 2/198 (1%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GL + ++L V+DEAD ML GF I + K++ Q + +ATMP ++ ++ F+
Sbjct: 141 GLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFTRQTLFFTATMPPEIRRITETFLH 200
Query: 187 DPVRILVQKEELTLEGIKQFYI-AIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDW 360
+P ++ V K T + Q + A + K E L L + + A+IFCN +R+V
Sbjct: 201 NPQKVEVSKPATTAVTVTQSQVPAGKKAHEKRELLRRLLREAKDLKNAIIFCNRKREVAI 260
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ +S+ + F+V A+HGDMDQ R + QFR G +L+ +D+ ARG+D+ +VS V N+
Sbjct: 261 VHKSLQKHGFSVGALHGDMDQPARMAALEQFRKGELPLLVASDVAARGLDIPEVSHVFNF 320
Query: 541 DLPTNRENYIHRIGRGGR 594
D+P + ++Y+HR+GR GR
Sbjct: 321 DVPHHPDDYVHRVGRTGR 338
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 141 bits (342), Expect = 1e-32
Identities = 69/195 (35%), Positives = 108/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K VLDEADEMLS GF D I + D Q +L SAT+ V+ ++ ++
Sbjct: 193 LKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTMLFSATLSSRVMSIANRYLHS 252
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I + +++ I+Q Y I + K+ + +++ ++ A+IF TR V L
Sbjct: 253 PESISISPKQMIGSSIEQRYYLINNSD-KIAAITRVFEVETVESALIFARTRATVSELAN 311
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R F + GD+ Q R ++ +F+ G +VL+ TD+ ARG+D+ +S V NYDLP
Sbjct: 312 ELISRGFAAEGLSGDLSQEARTRVLSRFKKGQIKVLVATDVAARGLDIDDISHVFNYDLP 371
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 372 EDPEVYVHRIGRTGR 386
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 141 bits (341), Expect = 1e-32
Identities = 67/190 (35%), Positives = 110/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ +LDEAD ML GF I ++ S Q+++ SAT + ++++ F+ +PV I
Sbjct: 147 LEVMILDEADRMLDMGFVPDIRKIYNATSKKQQMLMFSATFDPPIQKIAQEFLTNPVTIS 206
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
++ + + IKQ + + K + L + QA+IF T+R D L++ ++
Sbjct: 207 IKPDVSGHKNIKQLIYFADNQSHKQQMLDHFIKNDEVTQAIIFTATKRMADQLSDQLYHS 266
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
D SA+HGDM Q R + +F+ +++L+ TDL +RGIDV+ +S V NYD+P E+
Sbjct: 267 DIKTSALHGDMSQGSRTKTINRFKRNETKILVATDLASRGIDVKNISHVFNYDMPRFAED 326
Query: 565 YIHRIGRGGR 594
YIHRIGR GR
Sbjct: 327 YIHRIGRTGR 336
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 793
Score = 141 bits (341), Expect = 1e-32
Identities = 71/196 (36%), Positives = 110/196 (56%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GL + V+DEAD ML GF I + +L A Q + SATM ++ ++ F+R
Sbjct: 431 GLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTLFFSATMAPEIRRLADAFLR 490
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
PV I V ++ I++ + + +E K TL L ++ A++FCN +R VD +
Sbjct: 491 HPVEITVSRQSSVATTIEEALVIVPEDE-KRRTLKKLLRRENVQSAIVFCNRKRDVDMIQ 549
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ + + D +HGD+ Q R + +FR+G + L+ +D+ ARGID+ +S V NYDL
Sbjct: 550 QYLTKHDIEAGHLHGDLAQSLRFSTLERFRSGELKFLVCSDVAARGIDIGGLSHVFNYDL 609
Query: 547 PTNRENYIHRIGRGGR 594
P N E+Y+HRIGR GR
Sbjct: 610 PFNAEDYVHRIGRTGR 625
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 141 bits (341), Expect = 1e-32
Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
R +K FVLDE D+ML + + + ++F++ + Q ++ SAT+ D+ V R F
Sbjct: 182 RSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKF 241
Query: 181 MRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
M+DP+ + V E +LTL G++Q+Y+ ++ E K L DL D L Q +IF + ++
Sbjct: 242 MQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQVIIFVKSVQRCM 300
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L + + E++F A+H M Q ER +QF+ R+L+ T+L RG+D+++V+ V N
Sbjct: 301 ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN 360
Query: 538 YDLPTNRENYIHRIGRGGR 594
YD+P + + Y+HR+ R GR
Sbjct: 361 YDMPEDSDTYLHRVARAGR 379
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 140 bits (340), Expect = 2e-32
Identities = 67/192 (34%), Positives = 109/192 (56%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + VLDEADEML GF+D+++ + + +L SATMP +V ++ +M+DP+
Sbjct: 145 SGVSWVVLDEADEMLQMGFQDELNAILAVTPDSKNTLLFSATMPREVAAIAANYMKDPLE 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I+V + E + Y + + + L + D A+IFC TR + + + +
Sbjct: 205 IIVGRRNAGAENVDHIYYVVSARH-RYQALRRIADMNPELYAIIFCRTRLETREIVDKLI 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E ++ A+HGD+ Q +R+ +M +FR+ + R+L+ TD+ ARG+DV ++ VINY LP
Sbjct: 264 EDGYSADALHGDLSQSQRDHVMHKFRSRNIRMLVATDVAARGLDVNDLTHVINYSLPEES 323
Query: 559 ENYIHRIGRGGR 594
Y HR GR GR
Sbjct: 324 SGYTHRSGRTGR 335
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 140 bits (340), Expect = 2e-32
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ ++ VLDEAD ML GF D + + +L D Q +L SATMPD ++ +SR F+R
Sbjct: 252 LKLDRVRALVLDEADRMLDLGFLDDVERILAILPEDRQTMLFSATMPDPIVALSRRFLRR 311
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEW-KLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
PV I T + +A K+E + + +IF T+R D +
Sbjct: 312 PVTIHAGHTAETGPSPQTQQLAYRTHSLNKIEIVARILQARGRGLTMIFTRTKRAADRVA 371
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ R F V+A+HGD+ Q RE +R FRTG L+ TD+ ARGIDV V+ V+NYD
Sbjct: 372 ADLDFRGFAVAAVHGDLGQGARERALRAFRTGKIDTLVATDVAARGIDVSGVTHVLNYDC 431
Query: 547 PTNRENYIHRIGRGGR 594
P +++ Y HRIGR GR
Sbjct: 432 PEDQDTYTHRIGRTGR 447
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 140 bits (340), Expect = 2e-32
Identities = 70/191 (36%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
I VLDEAD ML GF+ QI + + D Q + SAT P +V +++R F+ DP +++
Sbjct: 215 ITYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVI 274
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDWLTESMHE 381
+ EEL ++ I E K L +L D + ++ +IF +T++ D +T +
Sbjct: 275 IGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRM 334
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ ++HGD Q ER+ ++ +F++G S ++ TD+ ARG+DV+ V VINYD P + E
Sbjct: 335 DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE 394
Query: 562 NYIHRIGRGGR 594
+Y+HRIGR GR
Sbjct: 395 DYVHRIGRTGR 405
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 140 bits (339), Expect = 2e-32
Identities = 72/195 (36%), Positives = 112/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+R ++ VLDEAD+ML GF I + L Q ++ SATMP + ++ F+RD
Sbjct: 200 IRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRD 259
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + V E ++ I Q + + EE K + L L +++ +A++F T+ D +T
Sbjct: 260 PREVAVSVESKPVDRIDQQVLLLAPEE-KKDKLAWLLADVAVERAIVFTRTKHGADKVTR 318
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + +A+HG+ Q +RE + QFR+G RVL+ TD+ ARGIDV VS V+N++LP
Sbjct: 319 HLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAARGIDVDNVSHVVNFELP 378
Query: 550 TNRENYIHRIGRGGR 594
E+Y+HRIGR R
Sbjct: 379 NVPESYVHRIGRTAR 393
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 139 bits (337), Expect = 4e-32
Identities = 68/197 (34%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
+ I+ F++DE D +LS + + ++F L QV++ S TM D+ + R F++
Sbjct: 179 IETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQVMMFSGTMSDESKKTCRKFLQ 238
Query: 187 DPVRILVQ-KEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
D + I V+ +L L G++Q++I IE E+ K+ L L D + Q +IF N + + +L
Sbjct: 239 DQIEIFVEDNSKLVLHGLEQYHIKIE-EKQKISVLRQLLDQGNYNQVIIFVNKQDRAKYL 297
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
++ + ++ + ++ ++DQ ER I +F+ G +RVL+ TDL+ RGID+++V+ VIN+D
Sbjct: 298 SKYLTDKGHDNAFIYRNLDQSERTKIYSEFKEGKNRVLVATDLVGRGIDIERVNLVINFD 357
Query: 544 LPTNRENYIHRIGRGGR 594
+P E+Y+HR+GR GR
Sbjct: 358 MPQITEDYMHRVGRAGR 374
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 139 bits (337), Expect = 4e-32
Identities = 73/186 (39%), Positives = 109/186 (58%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
V +AD++LS+ F + D+ L+ + Q++L SAT P V + ++ P I + E
Sbjct: 264 VSPQADKLLSQDFVALVEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLM-E 322
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTV 396
ELTL+GI Q+Y A E K+ L L+ L I Q++IFCN+ ++V+ L + + + ++
Sbjct: 323 ELTLKGITQYY-AYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSC 381
Query: 397 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHR 576
+H M Q R + FR G R L+ TDL RGID+Q V+ VIN+D P N E Y+HR
Sbjct: 382 FYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHR 441
Query: 577 IGRGGR 594
IGR GR
Sbjct: 442 IGRSGR 447
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 139 bits (337), Expect = 4e-32
Identities = 75/192 (39%), Positives = 113/192 (58%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + VLDEAD+ML GF I D+ Q +L SAT+P D+ ++++ +M +P
Sbjct: 147 SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQM 206
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I VQ EE+T++ I+Q I + K + L + D AVIFC T+ + L +++
Sbjct: 207 IQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLK 265
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ + +HGD+ Q +RE +M+ FR + LI TD+ ARG+DV V+ V NYD+P +
Sbjct: 266 GLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDV 325
Query: 559 ENYIHRIGRGGR 594
E+YIHRIGR GR
Sbjct: 326 ESYIHRIGRTGR 337
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 139 bits (337), Expect = 4e-32
Identities = 71/195 (36%), Positives = 115/195 (58%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S + VLDEADEML GF D + + + L + QV+L SATMP ++ +S+ ++ D
Sbjct: 210 LDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLND 269
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + ++ ++ + I+Q I + + KLE L + D +IF T+ + E
Sbjct: 270 PAEVTIKTKDQDGKLIRQRAITVPMSH-KLEALQRVLDACGGEGVIIFARTKVITLTVAE 328
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ V+ ++GD+ Q +RE + + R+GS VL+ TD+ ARG+DV+++ VINYD+P
Sbjct: 329 TLEAAGHQVAVLNGDVPQNQRERTVERLRSGSVDVLVATDVAARGLDVERIGLVINYDMP 388
Query: 550 TNRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 389 FDSEAYVHRIGRTGR 403
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 139 bits (337), Expect = 4e-32
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 7/197 (3%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
+K+FVLDEAD ++ F + + ++ + Q++L SAT + V++ + F+ P
Sbjct: 195 LKVFVLDEADILIETPEFLNIAKRIKSKVTNNCQILLFSATYDERVMDFAHDFVPQPNEF 254
Query: 202 LVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
++ +ELTL+ IKQFYI ++ E K L D+Y S+ Q +IFC +R+ +L +++
Sbjct: 255 SIKPQELTLKNIKQFYIQMKSSEDKYPKLIDIYGMKSMGQCIIFCESRKMACYLQKALER 314
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR- 558
S + G++D ER+ + FR G SRVLI T+L +RGID+ QV+ +IN+D+P +
Sbjct: 315 DSHLSSLLTGELDVLERQRQIDDFRNGKSRVLIATNLCSRGIDIPQVNLIINWDMPKTKD 374
Query: 559 -----ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 375 GKPDCETYLHRIGRSGR 391
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 139 bits (337), Expect = 4e-32
Identities = 73/195 (37%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPV 195
+ + V+DEAD +L GF+D I ++ + + D Q + SAT P V +++ F + P+
Sbjct: 246 ANVSYLVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPI 305
Query: 196 RILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTE 369
+ + K LT+ + I Q I + ++ KL+ L D+ DTL I+ V IF +++ + L+
Sbjct: 306 YVQIGKSNLTINKNIDQEIICL-FQKDKLQKLLDILDTLKISDKVLIFSEQKQRCEQLSI 364
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+M ++ + A+HGD Q +R+ IM+ FR+G +R+L TDL +RG+DV ++ VINYD P
Sbjct: 365 NMADKGYYTIALHGDKTQPQRDEIMKAFRSGYTRLLCATDLASRGLDVTDITVVINYDFP 424
Query: 550 TNRENYIHRIGRGGR 594
++YIHRIGR GR
Sbjct: 425 KYFDDYIHRIGRTGR 439
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 139 bits (336), Expect = 5e-32
Identities = 69/195 (35%), Positives = 111/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L +++ VLDEADEML+ GF + + V K D V++ SATMP + +++ +M +
Sbjct: 141 LELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYMHN 200
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ I + E +T+E I Q E K LC + D +IFC T+ +V+ ++
Sbjct: 201 SITIKAKSETMTMETIDQVVYEAYPEN-KFAALCRIMDLEKDFYGIIFCRTKVEVEKVSA 259
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + +HGD+ Q RE ++++FR + +LI TD+ ARGIDV +S ++N+ LP
Sbjct: 260 GLANEGYAADYIHGDVAQESRERLLKRFRNRNISLLIATDVAARGIDVTDLSHIVNFSLP 319
Query: 550 TNRENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 320 EQFESYVHRIGRTGR 334
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 138 bits (335), Expect = 7e-32
Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L S +++ VLDEADEML GF + ++ A Q +L SATMP ++ ++R +
Sbjct: 199 KDLDLSHVRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLFSATMPAPIMALARSQL 258
Query: 184 RDPVRILVQ--KEELTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV 354
PV + + + T+ +QF Y A L+ K+E + + + + +IFC T+R
Sbjct: 259 HRPVHVRAEGADTQATVPDTQQFVYQAHPLD--KIEIIGRILQANDVEKVIIFCRTKRAC 316
Query: 355 DWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI 534
L++ + +R F A+HGD+ Q RE +++FR G + +L+ TD+ ARGIDV VS VI
Sbjct: 317 QRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAARGIDVTGVSHVI 376
Query: 535 NYDLPTNRENYIHRIGRGGR 594
N++ P + + Y+HRIGR GR
Sbjct: 377 NHECPEDEKTYVHRIGRTGR 396
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 138 bits (335), Expect = 7e-32
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQK- 213
VLDEADEML GF + + L + Q +L SATMP V+ ++R FM+ PV + ++
Sbjct: 236 VLDEADEMLDLGFLPDVERIMSQLPTERQTMLFSATMPGPVISLARRFMKRPVHVRAEQP 295
Query: 214 -EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDF 390
E T+ +Q + K+E L + A++F TRR D + E + +R F
Sbjct: 296 DEGRTVPTTRQHVFRAHALD-KMEVLARVLQAGGRGLAMVFVRTRRTADKVAEDLAKRGF 354
Query: 391 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
+A+HGD+ Q +RE +R FR+G VL+ TD+ ARGID+ V+ V+NY P + Y+
Sbjct: 355 AAAAVHGDLGQGQREQALRAFRSGKVDVLVATDVAARGIDINGVTHVVNYQCPEDENVYL 414
Query: 571 HRIGRGGR 594
HRIGR GR
Sbjct: 415 HRIGRTGR 422
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 138 bits (335), Expect = 7e-32
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 ARG-LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 177
A+G L +IK VLDEAD ML GF ++I + + Q +L SAT P + +++
Sbjct: 138 AKGTLTLESIKTLVLDEADRMLDMGFYEEIIKIGSNMPKQKQTLLFSATFPPKIESLAKA 197
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
++DP+ I K + E +K + E + K +TL L + +IFCNT+ +V
Sbjct: 198 LLKDPLTI---KVDTVQEAMKINELVYETPD-KFKTLNALIGSYKPDSLLIFCNTKAEVI 253
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L + + +R +V +HGD+DQRER + F S R+++ TD+ +RG+D++ +S VIN
Sbjct: 254 SLADRLQQRGHSVIDIHGDLDQRERNEAVILFSNRSKRIMVATDVASRGLDIKDISLVIN 313
Query: 538 YDLPTNRENYIHRIGRGGR 594
YDLP ++E Y HRIGR GR
Sbjct: 314 YDLPFDKEVYTHRIGRTGR 332
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 138 bits (335), Expect = 7e-32
Identities = 69/188 (36%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRILVQK 213
V+DEAD +L GF+ Q+ + ++ + Q++ L+AT P+ V +++ F DPV+I + K
Sbjct: 280 VIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGK 339
Query: 214 EELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDF 390
ELT + I+Q I + K + L L + + +IFC+T+R D L + + +
Sbjct: 340 NELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNKILIFCDTKRNCDNLGKELRYHQY 399
Query: 391 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
++HGD QRER+ I+ ++T +L+ TD+ +RG+D++ +S VINYD+P E+YI
Sbjct: 400 NALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGLDIKNISVVINYDIPNTIEDYI 459
Query: 571 HRIGRGGR 594
HRIGR GR
Sbjct: 460 HRIGRTGR 467
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 138 bits (335), Expect = 7e-32
Identities = 69/191 (36%), Positives = 112/191 (58%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD+ML GF+ QI + +S D Q ++ SAT P ++ +++ F+ DPV ++
Sbjct: 273 VNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMI 332
Query: 205 VQKEELTLEG-IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
+ ++LT IKQ E E KL ++ + + +IF T+R D L E+++
Sbjct: 333 IGNKDLTTNSNIKQVITKCEEFE-KLSKCLEVLNEHKDDKIIIFTKTKRTTDDLQENLNM 391
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ F ++HGD Q +R+ ++ +FR+ +L+ TD+ ARG+DV + VINYD P + E
Sbjct: 392 KGFQAYSLHGDKAQNQRDFVLGKFRSCKKGILVATDVAARGLDVNDIDIVINYDFPGDIE 451
Query: 562 NYIHRIGRGGR 594
Y+HRIGR R
Sbjct: 452 TYVHRIGRTAR 462
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 138 bits (335), Expect = 7e-32
Identities = 68/195 (34%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S + VLDEADEML+ GF D + + QV L SATMP + ++S ++ D
Sbjct: 152 LDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHD 211
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + + + E I Q YI + K++ L + + ++F T++ + + E
Sbjct: 212 PFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEVEPFEAMIVFVRTKQATEEIAE 268
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R F+ +A+ GD+ Q +RE + R G +L+ TD+ ARG+DV+++S V+NYD+P
Sbjct: 269 KLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIP 328
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 329 HDTESYVHRIGRTGR 343
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 138 bits (334), Expect = 9e-32
Identities = 71/195 (36%), Positives = 117/195 (60%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ +K+ VLDEADEML+ GF + I + K + Q L SATMP+ + ++++ F++D
Sbjct: 147 LQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALFSATMPNAIRKLAKTFLKD 206
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P+ I ++ IKQ ++ K+ L L + +A+IF TR+ + E
Sbjct: 207 PLNIQIEAIAREKATIKQKAWKVQ-GMTKMTALTRLLEVTPYQRALIFVRTRQDTMDVAE 265
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ F + + GD++Q +RE + Q R+G +L+ TD++ARG+DV +++ VINYDLP
Sbjct: 266 LLQRNGFKAAPLSGDLNQAQREQTVSQLRSGHIEILVGTDVVARGLDVPEITHVINYDLP 325
Query: 550 TNRENYIHRIGRGGR 594
++ E+Y+HRIGR GR
Sbjct: 326 SDTESYVHRIGRTGR 340
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 138 bits (334), Expect = 9e-32
Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L ++ VLDEADEML GF D + + + A+ Q L SATMPD + V+ ++
Sbjct: 181 KSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTALFSATMPDAIRRVAHRYL 240
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLS-IAQAVIFCNTRRKVDW 360
R+P + ++ T+ +Q Y I + KL+ L + + A+IF T+
Sbjct: 241 REPREVKIKASTTTVSTTRQRYCQISVAH-KLDALTRILEVEEDFDAAIIFVRTKTATVE 299
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
L + + R ++ +A++GDM Q+ RE ++ Q + G +++ TD+ ARG+DV ++S VINY
Sbjct: 300 LADKLEARGYSAAALNGDMTQQLRERVIEQLKGGQLDIVVATDVAARGLDVSRISHVINY 359
Query: 541 DLPTNRENYIHRIGRGGR 594
D+P + E Y+HRIGR GR
Sbjct: 360 DIPYDTEAYVHRIGRTGR 377
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 138 bits (334), Expect = 9e-32
Identities = 70/186 (37%), Positives = 104/186 (55%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEADEML+ GF + I ++ D L SATMP +V +++ FM DP+ I V +
Sbjct: 150 VLDEADEMLNMGFYEDITNILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVGHK 209
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTV 396
+ + Y + + + + L L D +VIFC T+R + E + E +
Sbjct: 210 NEGAKNVSHEYYVVHTRD-RYQALKRLSDANPDIFSVIFCRTKRDTQKVAEQLIEDGYNA 268
Query: 397 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHR 576
A+HGD+ Q +R+++M+ FR ++L+ TD+ ARGIDV ++ VINY LP E Y HR
Sbjct: 269 GALHGDLSQNQRDLVMKSFRNNQIQMLVATDVAARGIDVDDITHVINYQLPDEIETYTHR 328
Query: 577 IGRGGR 594
GR GR
Sbjct: 329 SGRTGR 334
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 138 bits (334), Expect = 9e-32
Identities = 74/197 (37%), Positives = 109/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ LR S + VLDEAD+ML GF + + +L A+ Q +L SATMP + E+SR ++
Sbjct: 212 KALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYL 271
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP R+ V + I Q +E + K + L DL A++F T+ D L
Sbjct: 272 TDPARVEVAPPGKIADKITQSVHFVE-QGAKTQLLIDLLGNHRDELALVFSRTKHGADRL 330
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ F +A+HG+ Q +RE ++ FR G+ +VL+ TD+ ARGID+ V V N+D
Sbjct: 331 ARKLSNAGFETAAIHGNRSQGQRERALKAFREGTLKVLVATDVAARGIDIPDVRFVYNFD 390
Query: 544 LPTNRENYIHRIGRGGR 594
LP EN++HRIGR R
Sbjct: 391 LPNVPENFVHRIGRTAR 407
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 138 bits (333), Expect = 1e-31
Identities = 69/203 (33%), Positives = 117/203 (57%), Gaps = 8/203 (3%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD--------VQVILLSATMPDDVLE 165
++ ++K VLDEADEMLS GFK+ + + D + L SATM +V
Sbjct: 183 IKLQSVKTVVLDEADEMLSMGFKEALETILSATQPDDSDSVRAACRTWLFSATMSSEVRR 242
Query: 166 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 345
++ ++ +P + V K T + I+Q Y ++ +K E + L TL +IFC T+
Sbjct: 243 LTSTYLENPETVSVNKVGGTADTIEQVYYTVK-NSYKTEVIGRLLQTLPEFYGIIFCQTK 301
Query: 346 RKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVS 525
+V L + + +R F ++HGD Q+ERE +++F+ +V++ TD+ ARG+D++ ++
Sbjct: 302 MEVAELADVLTQRGFPADSLHGDKSQQEREATLKKFKQRQVKVIVATDVAARGLDIKDLT 361
Query: 526 CVINYDLPTNRENYIHRIGRGGR 594
V+N+ LP + E+Y+HRIGR GR
Sbjct: 362 HVVNHSLPWDSESYVHRIGRTGR 384
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 138 bits (333), Expect = 1e-31
Identities = 70/195 (35%), Positives = 112/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S I+ VLDEADEMLS GF D I + + A Q +L SAT+ D++ ++R ++R+
Sbjct: 144 LDLSAIQYAVLDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLRE 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV + + E + ++ +++ + L DL + +A++F T+R+ D L
Sbjct: 204 PVVVDLVGEGKSQAAQSVEHLKVKVGRTRTRVLADLLTVYNPEKAIVFTRTKREADELAN 263
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R A+HGD+ Q +RE + FR+G VL+ TD+ ARG+D+ +V V+ Y LP
Sbjct: 264 ELIHRGIESEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDIPEVDLVVQYHLP 323
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HR GR GR
Sbjct: 324 QDPESYVHRSGRTGR 338
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 138 bits (333), Expect = 1e-31
Identities = 71/191 (37%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR-DPVRILVQK 213
V+DEAD +L GF+ Q+ + ++ + Q++ +AT P+ V +++ F DPV+I + K
Sbjct: 480 VIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGK 539
Query: 214 EELTL-EGIKQFYI---AIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
ELT + I+Q + +I+L++ L+ L Y+ I +IFC+T+R D L + +
Sbjct: 540 SELTANKNIQQSVVISSSIDLKKKLLDWLKQNYEGNKI---LIFCDTKRNCDSLCKELRY 596
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ A+HGD +QRER+ I+ +R+ +L+ TD+ +RG+D++ +S V+NYDLP E
Sbjct: 597 HQYNALAIHGDKEQRERDRILSNYRSDRCNILVATDVASRGLDIKNISVVVNYDLPNTIE 656
Query: 562 NYIHRIGRGGR 594
+YIHRIGR GR
Sbjct: 657 DYIHRIGRTGR 667
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 138 bits (333), Expect = 1e-31
Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD ML GF+ QI + + D Q + SAT P +V ++R F+++P +++
Sbjct: 399 VTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVI 458
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDWLTESMHE 381
+ +L Q I + E K L L D + ++ +IF T++ D +T +
Sbjct: 459 IGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRM 518
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ ++HGD Q ER+ ++ +F++G S ++ TD+ ARG+DV+ + CVIN+D PT E
Sbjct: 519 DGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLE 578
Query: 562 NYIHRIGRGGR 594
+YIHRIGR GR
Sbjct: 579 DYIHRIGRTGR 589
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 137 bits (332), Expect = 2e-31
Identities = 65/192 (33%), Positives = 111/192 (57%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + FVLDEAD+ML GF +++ + + L Q +L SAT P +L ++ M++P+
Sbjct: 148 SHVDFFVLDEADKMLDFGFAEELELILEALGQKRQNLLFSATYPPKMLFIASKIMQNPIE 207
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V+ EE T+E + Q I + E + L L + ++F +++R D +
Sbjct: 208 VSVEDEEPTVESVVQRAILVSREN-RAPLLRHLLKSEKYELVIVFMSSKRAADNIAAKFR 266
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ F+ + HGD+ Q +R + +F+T ++L TDL++RG+D+ ++CVIN+DLP +
Sbjct: 267 KHGFSADSFHGDLHQEDRNYTLEEFKTKKLQILFATDLVSRGLDINDITCVINFDLPRSS 326
Query: 559 ENYIHRIGRGGR 594
+YIHRIGR R
Sbjct: 327 ADYIHRIGRTAR 338
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 137 bits (332), Expect = 2e-31
Identities = 73/197 (37%), Positives = 106/197 (53%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L S + V DEAD ML GFKD+I +V K L + Q +L SAT+ D +L SR +
Sbjct: 151 RALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLLFSATLDDRMLSFSRRLL 210
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
R P I V + T I + ++ K LC L S Q++IF T++ D L
Sbjct: 211 RSPQVIEVAQRNTTASSIVERVFNVDANR-KCAMLCHLITQESWLQSLIFSRTKQGADAL 269
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ M + A H D+ Q RE ++ F+ G L+ TD+ ARG+D+ +++ V+N +
Sbjct: 270 VKQMKQAGVAAEAFHADLSQAVREQVLAAFKAGEVTALVATDVAARGLDINELNYVVNME 329
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR GR
Sbjct: 330 LPFQVEDYVHRIGRTGR 346
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 137 bits (332), Expect = 2e-31
Identities = 74/198 (37%), Positives = 110/198 (55%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ + + VLDEADEML GF I + + Q +L SATMPD ++ ++R FM
Sbjct: 158 LQLGGLSVLVLDEADEMLDLGFLPDIERILRQTPDTRQAMLFSATMPDPIITLARTFMNQ 217
Query: 190 PVRILVQKEE--LTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
P I + + T + QF Y A L+ K+E + + +IF T+R
Sbjct: 218 PTHIRAESPQSSATHDTTAQFAYRAHALD--KVEMVSRILQAEGRGATMIFTRTKRTAQK 275
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ + + ER F V A+HGD+ Q RE ++ FRTG VL+ TD+ ARGID+ ++ VIN+
Sbjct: 276 VADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVAARGIDIDDITHVINF 335
Query: 541 DLPTNRENYIHRIGRGGR 594
+P + + Y+HRIGR GR
Sbjct: 336 QIPEDEQAYVHRIGRTGR 353
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|Rep:
LD33749p - Drosophila melanogaster (Fruit fly)
Length = 703
Score = 137 bits (332), Expect = 2e-31
Identities = 70/200 (35%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
A + STI VLDEAD ML GF+ QI V + D Q I+ SAT P V +++ +
Sbjct: 423 ANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSY 482
Query: 181 MRDPVRILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKV 354
M++P+++ V +L +KQ +E + K T+ +S + +IFC + +
Sbjct: 483 MKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRA 542
Query: 355 DWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI 534
D L+ + F +HG+ DQ +RE + ++G R+L+ TD+ +RG+D++ ++ VI
Sbjct: 543 DDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVI 602
Query: 535 NYDLPTNRENYIHRIGRGGR 594
NYD P N E Y+HR+GR GR
Sbjct: 603 NYDFPHNIEEYVHRVGRTGR 622
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 137 bits (332), Expect = 2e-31
Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVQVILLSATMPDDVLEVSRCF 180
R L+ I +LDEADEM++ GF D + + K+ + Q +L SATMP + + + F
Sbjct: 137 RTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQF 196
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAI-ELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
M+ P I E++ I++FY + ELE K +T + D A++F T+R+VD
Sbjct: 197 MKSPKIIKTMNNEMSDPQIEEFYTIVKELE--KFDTFTNFLDVHQPELAIVFGRTKRRVD 254
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
LT ++ + + +HGD+ Q +R ++++F+ +L+ TD+ ARG+D+ VS V N
Sbjct: 255 ELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYN 314
Query: 538 YDLPTNRENYIHRIGRGGR 594
+D+P + E+Y HRIGR GR
Sbjct: 315 FDIPQDTESYTHRIGRTGR 333
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 137 bits (331), Expect = 2e-31
Identities = 73/192 (38%), Positives = 111/192 (57%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +++ VLDEAD ML GF D I + A+ Q +L SAT+ V ++R RD R
Sbjct: 147 SRLEVLVLDEADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLARELTRDAQR 206
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I ++ I+Q + + + K L L + + QA++F +T+R + +++ +
Sbjct: 207 IEIEAVPHKEAKIEQRLLFADNMDHKNRLLDALLRDVEMVQAIVFASTKRSTEEISDLLA 266
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E F A+HGDM Q +R +++ R G +RVL+ TD+ ARGIDV +S VIN+DLP
Sbjct: 267 ESGFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAARGIDVASISHVINFDLPRQA 326
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 327 EDYVHRIGRTGR 338
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 137 bits (331), Expect = 2e-31
Identities = 71/198 (35%), Positives = 120/198 (60%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
++ + S +++ VLDEAD+ML+ GFK+++ ++FK+L Q +L SAT+ DV ++
Sbjct: 149 SKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKRQNLLFSATLGKDVDTITEFL 208
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
+ DPV+I + EE ++ I+Q A+E + K L L + Q +IF ++ + D
Sbjct: 209 LHDPVKIEIIAEEQNIDLIQQIAYAVE-DARKGPLLRYLIKEQKMNQVLIFTSSVHRADA 267
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ E + + +A+H Q R ++QF+ G+ VL+ TDL++RGID+ + VINY
Sbjct: 268 VVEKLKANNILAAALHSKKSQGARTEALKQFKAGNIHVLVATDLMSRGIDIPFLPFVINY 327
Query: 541 DLPTNRENYIHRIGRGGR 594
+LP + ++YIHRIGR GR
Sbjct: 328 ELPRSPKDYIHRIGRTGR 345
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 137 bits (331), Expect = 2e-31
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + + D QV++ SAT P +V +++ F+ + +++ +
Sbjct: 309 VLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSL 368
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI---AQAVIFCNTRRKVDWLTESMHERD 387
L+ + + E KL L L +S + +IF T+++VD +T ++ +
Sbjct: 369 SLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQG 428
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 567
+ A+HGD Q+ER+ ++ FR G +L+ TD+ ARG+DV V VINYD P+N E+Y
Sbjct: 429 WRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDY 488
Query: 568 IHRIGRGGR 594
+HRIGR GR
Sbjct: 489 VHRIGRTGR 497
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 136 bits (330), Expect = 3e-31
Identities = 71/195 (36%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ S +K ++DEAD ML GF D + + L ++ ++L SATM + + ++ FM
Sbjct: 142 LKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENITIMLFSATMGEALYALTDEFMNS 201
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV + ++ T++ I+Q + EE K E + + A+IFC TR V+ L
Sbjct: 202 PVEVKLEDGTETVDSIEQLGCFVT-EEDKYELFLRMLYKNNPTNAMIFCGTREMVEVLYY 260
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + +HG +DQ++R + FRTG R LI TD+ ARG+D ++ VINYDLP
Sbjct: 261 KLKKEKVWCGMLHGLIDQKQRIHTIDDFRTGGFRYLIATDVAARGVDFDDITHVINYDLP 320
Query: 550 TNRENYIHRIGRGGR 594
++E Y+HRIGR GR
Sbjct: 321 MSKETYVHRIGRTGR 335
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 136 bits (330), Expect = 3e-31
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + D QV++ SAT P +V ++ F+ D ++I +
Sbjct: 274 VLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSL 333
Query: 217 ELTLE-GIKQFYIAIE--LEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
L+ I Q E ++ KL L + + +IF T+R+VD +T +++
Sbjct: 334 NLSANHNILQIVDVCEDYEKDQKLMKLLTEISAENETKTIIFVETKRRVDDITRNINRNG 393
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 567
+ ++HGD Q+ER+ ++ FR G +L+ TD+ ARG+DV+ V VINYD P+N E+Y
Sbjct: 394 WRAVSIHGDKSQQERDYVLNAFRNGRQGILVATDVAARGLDVEDVKFVINYDYPSNSEDY 453
Query: 568 IHRIGRGGR 594
+HRIGR GR
Sbjct: 454 VHRIGRTGR 462
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 136 bits (330), Expect = 3e-31
Identities = 71/195 (36%), Positives = 109/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S ++ VLDEADEML GF D + V L + Q L SATMP+ + +++ FM D
Sbjct: 144 LNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRFMND 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + ++ I Q + K E L + A+IF T+ +TE
Sbjct: 204 PQEVKIKVNNENAPDIDQSCWYVHGVR-KNEALLRFLEVEDFDAAIIFARTKTGTLDITE 262
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + F +A++GDM Q+ RE + + R GS +++ TD+ ARGID++++S V+NYD+P
Sbjct: 263 LLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGIDIERISLVVNYDIP 322
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 323 LDAESYVHRIGRTGR 337
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 136 bits (329), Expect = 4e-31
Identities = 70/192 (36%), Positives = 104/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + VLDEAD ML GF + + + K A+ Q L SATMP ++ ++ +RDPVR
Sbjct: 233 SQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVR 292
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V + T I Q + +E K L + + ++F T+ D + +
Sbjct: 293 VEVAPQGATASEITQVVHPVPTKE-KRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLE 351
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ V+A+HG+ Q R+ + FR G+ R+L+ TD+ ARGIDV +S V+NYDLP
Sbjct: 352 RDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGISHVVNYDLPDEP 411
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 412 ETYVHRIGRTGR 423
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 136 bits (329), Expect = 4e-31
Identities = 72/197 (36%), Positives = 106/197 (53%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L S ++ VLDE DEMLS GF + I + + + Q L SAT+P D+ ++R M
Sbjct: 296 KSLDLSKVRTVVLDECDEMLSMGFLEDIRAILRACPKERQTCLFSATVPRDIARIARRDM 355
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
R+P I++ +++ I + + K L D+ A A++FCNTR + +
Sbjct: 356 REPEHIVLSGDDIAAAEIYHGFYSTG-GSIKTRDLVDMIIVEDPAAAMVFCNTREETRLV 414
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + ++ A+ D+ Q RE +M FR R L+ TD+ ARGIDV VS VINY
Sbjct: 415 ASVLQKNGYSAHALSSDLTQAAREHVMGLFRDRKLRFLVATDVAARGIDVSHVSHVINYS 474
Query: 544 LPTNRENYIHRIGRGGR 594
P N ENY+HR GR GR
Sbjct: 475 FPENAENYVHRTGRTGR 491
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 136 bits (329), Expect = 4e-31
Identities = 71/203 (34%), Positives = 121/203 (59%), Gaps = 8/203 (3%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
L +I+LF+LDEAD++L G F++QI+ ++ L A Q++ +SAT P+ + +MR
Sbjct: 200 LNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMR 259
Query: 187 DPVRILVQKEELTLEGIKQFY-------IAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 345
DP + + + +L G+KQ+Y +A ++ E K + L +L+ + QA++F N
Sbjct: 260 DPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLH 319
Query: 346 RKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVS 525
+ L + + + F + G+M+Q +R M + + RVLI+TDL +RGID ++V+
Sbjct: 320 SRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVN 379
Query: 526 CVINYDLPTNRENYIHRIGRGGR 594
V+N D+P + E Y+HRIGR GR
Sbjct: 380 LVVNLDVPLDWETYMHRIGRAGR 402
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 136 bits (328), Expect = 5e-31
Identities = 67/196 (34%), Positives = 111/196 (56%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GL S I VLDEAD +L+ GF + ++ +S Q + SAT D++ ++ M+
Sbjct: 135 GLDLSNIHYLVLDEADRLLNMGFWPDVQNIAGQISNQRQTAMFSATFSDELKGKAKLLMQ 194
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
P ++ +E T + I + + K + L +L + QA++F + D L
Sbjct: 195 APKQVAAHQENSTNQDIAETLYLVNKGS-KTKALIELIQKNAWTQALVFIGAKENADGLA 253
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ +++ + +A+HGD Q ERE + QF++G ++VLI TDLLARGI ++Q+ VIN++L
Sbjct: 254 KKLNKAGISTNALHGDKSQAEREAALAQFKSGQTQVLIATDLLARGIHIEQLPVVINFEL 313
Query: 547 PTNRENYIHRIGRGGR 594
P + E Y+HR+GR R
Sbjct: 314 PMHAETYVHRVGRTAR 329
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 136 bits (328), Expect = 5e-31
Identities = 70/192 (36%), Positives = 110/192 (57%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S++++ VLDEAD ML GF D I D+ + D Q I+ SAT V +++ F ++P R
Sbjct: 189 SSLEILVLDEADRMLDMGFADDISDILRAAPIDRQTIMCSATWDGPVGKIAASFTKNPER 248
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ ++ E +E ++ Y + + K L + + Q +IF T+R + L + +
Sbjct: 249 VSIKVESAHIE--EKVYYCDDFDH-KNRLLDKIVCHKDMEQIIIFAATKRSTEKLAKQLQ 305
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E S +HGD+ Q +R I++ R G ++L+ TD+ ARG+DV +S VINYDLP
Sbjct: 306 EAGHKASFLHGDLPQSKRNRIVQDLRNGKCKILVATDVAARGLDVPALSHVINYDLPRQT 365
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 366 EDYVHRIGRCGR 377
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 136 bits (328), Expect = 5e-31
Identities = 70/190 (36%), Positives = 104/190 (54%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
++ VLDEAD ML GF +++ VF L A Q +L SAT DD+ ++ +R PV I
Sbjct: 149 VQTLVLDEADRMLDLGFARELNAVFAALPAQRQTLLFSATFSDDIRAMAATILRGPVNIS 208
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V T IKQ+ + ++ K + L A++F TR VD+L + E
Sbjct: 209 VSPPNATASKIKQWVVTVDKRN-KPDLFMHLVAENKWEHALVFVKTRNGVDYLAAMLDEA 267
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ V +HGD Q R + +F+TG ++L+ TD+ ARG+D+ + VIN DLP ++
Sbjct: 268 GYAVDTIHGDKPQPARLRALERFKTGEVQMLVATDVAARGLDIDDLPLVINVDLPIVAQD 327
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 328 YVHRIGRTGR 337
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 136 bits (328), Expect = 5e-31
Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ V+DEAD ML GF I + K+ Q + SATM ++++++ F+ PV +
Sbjct: 152 VEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLFFSATMAPEIIKLTEQFLHSPVCVE 211
Query: 205 VQKEELTLEGIKQFYIAIELEEW-KLETLCDLY--DTLSIAQAVIFCNTRRKVDWLTESM 375
+ KE T I Q + + W K L L + + A++FCN ++ + L S+
Sbjct: 212 ITKESSTARTITQRLVKSGSKAWHKRAVLRKLIHDENKELKNAIVFCNRKKDISELFRSL 271
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ +F+V +HGDMDQ R + F+ +L+ +D+ ARG+D+ VS V NYD+PT+
Sbjct: 272 VKYNFSVGVLHGDMDQHSRMNTLADFKENKLTLLVASDVAARGLDIPDVSHVFNYDVPTH 331
Query: 556 RENYIHRIGRGGR 594
E+YIHRIGR GR
Sbjct: 332 AEDYIHRIGRTGR 344
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 136 bits (328), Expect = 5e-31
Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 1/193 (0%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
STI +LDEAD ML GF+ QI V + D Q ++ SAT PD V +++ +M DP++
Sbjct: 252 STITYLILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQ 311
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDWLTESM 375
+ + +L I + EE K + + + D + +IFC + + D L+
Sbjct: 312 VYIGTLDLAATHTVTQVIEVMDEEDKFQRINEFVRDMQPTDKVIIFCGKKTRADDLSSEF 371
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ + A+HG+ +Q +RE + + G+ ++LI TD+ +RG+D++ ++ V+NYD P N
Sbjct: 372 ILSNISCQAIHGNREQSDREQALEDIKNGTVKILIATDVASRGLDIEDITHVVNYDFPRN 431
Query: 556 RENYIHRIGRGGR 594
E Y+HR+GR GR
Sbjct: 432 IEEYVHRVGRTGR 444
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 136 bits (328), Expect = 5e-31
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-PV 195
S + VLDEAD ML GF+ QI + + D Q +L SAT P +V +++R ++ P+
Sbjct: 134 SRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPI 193
Query: 196 RILVQKEEL--TLEGIKQFYIAIELEEWKLETLCDLYDTL--SIAQAVIFCNTRRKVDWL 363
I V + IKQ+ +E E K L + S + +IFC T+R D L
Sbjct: 194 HINVGSVDALKASHNIKQYVNVVEESEKKARLKMFLGQVMVESAPKVLIFCETKRGADIL 253
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + + +HGD Q ER ++ +FRTG+S ++I TD+ ARG+D++ ++ VIN+D
Sbjct: 254 TKELRLDGWPALCIHGDKKQEERTWVLNEFRTGASPIMIATDVAARGLDIKDINFVINFD 313
Query: 544 LPTNRENYIHRIGRGGR 594
P E+YIHRIGR GR
Sbjct: 314 FPNQIEDYIHRIGRTGR 330
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 136 bits (328), Expect = 5e-31
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R + + VLDEAD ML GF+ QI + K + Q ++ +AT P +V ++ +
Sbjct: 290 RRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRRIAEDLL 349
Query: 184 RDPVRILVQK-EELTLEGIKQFYIAIELEEWKLETLCDLYDTL-SIAQAVIFCNTRRKVD 357
PV++ + +EL + + KL L + + S ++ +IFC T+R D
Sbjct: 350 VHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKVLIFCTTKRMCD 409
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L ++ R F SA+HGD Q ERE ++ FR+G S +L+ TD+ ARG+D++ + VIN
Sbjct: 410 QLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVIN 468
Query: 538 YDLPTNRENYIHRIGRGGR 594
YD PT E+Y+HRIGR GR
Sbjct: 469 YDFPTGIEDYVHRIGRTGR 487
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 135 bits (327), Expect = 6e-31
Identities = 70/192 (36%), Positives = 110/192 (57%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S+ ++ V+DEAD ML GF I + L Q +L SATMP + +++ F+ +P +
Sbjct: 145 SSCEMLVIDEADRMLDMGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQ 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I + + I Q I + K + LCD+ A+IFCN + V L ++
Sbjct: 205 IEISRPATANTLIDQRLIEVSPRS-KKKKLCDMLRAEKDHTAIIFCNRKTTVRQLATTLE 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
++ F+V +HGDM Q ER + +F+ G VL+ +D+ ARG+DV+ +S V N+D+PT+
Sbjct: 264 QQGFSVGQIHGDMSQPERGSELERFKNGQISVLVASDIAARGLDVKGISHVFNFDVPTHP 323
Query: 559 ENYIHRIGRGGR 594
++YIHRIGR GR
Sbjct: 324 DDYIHRIGRTGR 335
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 135 bits (327), Expect = 6e-31
Identities = 67/192 (34%), Positives = 110/192 (57%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +++FVLDEAD ML GF + V K+L A Q + SATMP +V+++ +++PV+
Sbjct: 145 SRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVK 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V +E I Q ++ K + L L + L + A++F T+ + + +
Sbjct: 205 VAVDPVSSPVEIIDQSVYLVDKGN-KTKLLAWLVEGLDVKNAIVFTRTKHGANKVAGDLV 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ T +A+HG+ Q R+ + F+ G R L+ TD+ ARG+D++++S V NY+LP
Sbjct: 264 KAGITAAAIHGNKSQTARQQALADFKAGKVRCLVATDIAARGLDIEELSHVFNYNLPEVP 323
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 324 ETYVHRIGRTGR 335
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 135 bits (327), Expect = 6e-31
Identities = 71/198 (35%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + IK V+DEADEML GF + + + + + Q+++ SATMP ++ ++R M +
Sbjct: 141 LDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILMFSATMPQRIVTLARKHMGN 200
Query: 190 ---PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
+ KE++T++ KQ Y I E K+E L L D + ++F T+ + +
Sbjct: 201 FETVTTVQENKEDITVKKAKQIYYMIS-ESNKIELLSRLIDIDTNFYGLVFTKTKVQSEE 259
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ + ++ + A++GD+ Q +RE IM +F++ ++LI+TD+ ARGID+ + VINY
Sbjct: 260 IANELIKKGYEAEALNGDVSQNQRERIMDRFKSKRIKILISTDVAARGIDIDNLKYVINY 319
Query: 541 DLPTNRENYIHRIGRGGR 594
LP N ENYIHRIGR R
Sbjct: 320 SLPQNPENYIHRIGRTAR 337
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 135 bits (327), Expect = 6e-31
Identities = 69/197 (35%), Positives = 117/197 (59%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
L +K FVLDE D+ML + + + ++F+ QV++ SAT+ D+ V + FM+
Sbjct: 182 LNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ 241
Query: 187 DPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP+ + V E +LTL G++Q Y+ ++ E K + L +L D L Q VIF + ++ L
Sbjct: 242 DPMEVYVDDEAKLTLHGLQQHYVNLKENE-KNKKLFELLDVLEFNQVVIFVKSVQRCVAL 300
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
++ + E++F +H M Q ER +QF+ R+L+ T+L RG+D+++V+ V NYD
Sbjct: 301 SQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD 360
Query: 544 LPTNRENYIHRIGRGGR 594
+P + + Y+HR+ R GR
Sbjct: 361 MPEDSDTYLHRVARAGR 377
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 135 bits (326), Expect = 9e-31
Identities = 69/195 (35%), Positives = 108/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S + VLDEADEML GF + + + + Q L SATMP+ + ++R FM++
Sbjct: 145 LDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKE 204
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P + +Q T I Q Y + K E L + A+IF T+ + E
Sbjct: 205 PQEVRIQSSVTTRPDISQSYWTVWGMR-KNEALVRFLEAEDFDAAIIFVRTKNATLEVAE 263
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ + +A++GDM+Q RE + + + G +LI TD+ ARG+DV+++S V+NYD+P
Sbjct: 264 ALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 323
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 324 MDSESYVHRIGRTGR 338
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 134 bits (325), Expect = 1e-30
Identities = 65/190 (34%), Positives = 110/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
++ VLDEAD ML GF+D+I + + Q +L SAT P + +++ M+DP+RI
Sbjct: 148 VRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLLFSATYPKKIATIAKRVMKDPLRIE 207
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ + I+Q + + E +L L L D AV+FCNT+++ + + + +
Sbjct: 208 LDSQVHEESTIEQHFYKVTSESQRLLGLQLLLDKFKSESAVVFCNTKQEAKDICKDLSKV 267
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
F+ A+HGD++Q++R+ + +F S VL+ TD+ ARG+D+ + VINY + + E
Sbjct: 268 GFSTLALHGDLEQKDRQENLVRFANKSVAVLVATDVAARGLDIDSIDLVINYHISRDFEV 327
Query: 565 YIHRIGRGGR 594
++HRIGR GR
Sbjct: 328 HVHRIGRTGR 337
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 134 bits (324), Expect = 1e-30
Identities = 71/193 (36%), Positives = 112/193 (58%)
Frame = +1
Query: 16 ASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPV 195
AST+++ VLDEADEMLS GF + D+ + + D + SATMP V V+R F+ DP
Sbjct: 185 ASTLRMLVLDEADEMLSMGFYPDMKDIVEHVPGDRVSYMYSATMPPKVRSVAREFLDDPG 244
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ + +++++E + Y + + K + L + A+IF NT+R+V +L + +
Sbjct: 245 FLSLSTDKVSVEENEYRYYLVNPMD-KDRVMAQLLELEEPESALIFANTKREVSYLNKFL 303
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ + + M GD+ QR+RE + + R G R+L+ TD+ ARGIDV +S V YD+P +
Sbjct: 304 SNKGYDIDEMSGDLSQRDREEALDRLREGKLRLLVATDVAARGIDVSDLSHVFIYDVPQD 363
Query: 556 RENYIHRIGRGGR 594
E IHR GR R
Sbjct: 364 HEYIIHRSGRTAR 376
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 134 bits (324), Expect = 1e-30
Identities = 67/197 (34%), Positives = 110/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ + ++ VLDEAD ML GF D I + + D Q +L +AT + V ++ ++
Sbjct: 144 KAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYL 203
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+P +I V T + I+QF ++ + K + L L Q ++F T+++VD L
Sbjct: 204 NNPTKIKVTPRNSTAKQIRQFAYQVDYGQ-KADILSYLITEGKWGQTLVFVRTKKRVDEL 262
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + + +A+HG+ QRER ++ +F G VL+ TD+ ARG+D++ + V+NYD
Sbjct: 263 TQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDVAARGLDIESLPYVVNYD 322
Query: 544 LPTNRENYIHRIGRGGR 594
LP E Y+HRIGR GR
Sbjct: 323 LPNQPEAYVHRIGRTGR 339
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 134 bits (324), Expect = 1e-30
Identities = 69/190 (36%), Positives = 109/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++FVLDEAD+ML GF I + L + Q + SATMP ++ +++ +++P ++
Sbjct: 213 VEIFVLDEADQMLDLGFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVA 272
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ T+E I Q I IE + K L +L S+ ++++F T+R D + + +
Sbjct: 273 ITPSATTVERIDQSLIFIEAQR-KRPLLAELLADKSVERSIVFTRTKRGADRVAKYLVAS 331
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+A+HGD Q +RE + F+ G + LI TD+ ARGIDV VS V NY+LP E+
Sbjct: 332 GIEAAAIHGDKTQGQRERALAAFKAGQVKALIATDIAARGIDVNDVSHVFNYELPNVPES 391
Query: 565 YIHRIGRGGR 594
Y+HRIGR R
Sbjct: 392 YVHRIGRTAR 401
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 134 bits (324), Expect = 1e-30
Identities = 70/192 (36%), Positives = 105/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S I +LDEADEML+ GF + I ++ + L SATMP +V + + FM DP+
Sbjct: 145 SQINYCILDEADEMLNMGFYEDIVNILSTTPDEKNTWLFSATMPAEVARIGKQFMTDPIE 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I V + + Y + + + E L L D +V+FC T+R + E +
Sbjct: 205 ITVGAKNSGSATVSHEYYLVNARD-RYEALKRLADANPDIFSVVFCRTKRDTQAVAEKLV 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E ++ +A+HGD+ Q +R+ +M+ FR ++L+ TD+ ARGIDV V+ V+NY LP
Sbjct: 264 EDGYSAAALHGDLSQAQRDGVMKAFRGRQIQMLVATDVAARGIDVDNVTHVVNYQLPDEI 323
Query: 559 ENYIHRIGRGGR 594
E Y HR GR GR
Sbjct: 324 ETYNHRSGRTGR 335
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_36, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 813
Score = 134 bits (324), Expect = 1e-30
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM- 183
GL ++I VLDEAD ML GF+DQI + + D Q + SAT P++V ++
Sbjct: 574 GLPLNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATWPNEVQRLANSLCN 633
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+DP+ I + ++ L++ Q + I E K E +L D L + +IFC + L
Sbjct: 634 QDPIMIQLGEQGLSVNKNIQQEVIIVYEN-KFEKFAELTDRLKGQKLLIFCQKKLDTQKL 692
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ +HGD+ Q ER+ IM +F++G+ LITT+L +RG+DV V VINYD
Sbjct: 693 EYRLSIHGLKARYLHGDLKQAERDQIMVEFKSGAINCLITTNLASRGLDVSDVDVVINYD 752
Query: 544 LPTNRENYIHRIGRGGR 594
P E+YIHRIGR GR
Sbjct: 753 FPDTIEDYIHRIGRTGR 769
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 134 bits (324), Expect = 1e-30
Identities = 68/195 (34%), Positives = 111/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + FVLDEADEML GF + I + +L + Q L SAT+P +++E+++ FM +
Sbjct: 139 LNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFMHN 198
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
+ + K+E+T+ GI Y A+ E KL TL D +++IF T+ + + E
Sbjct: 199 EEILFLSKDEVTVNGIDHNY-AVSRRERKLRTLFSYIDKYKPEKSIIFSRTKAGANMIYE 257
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ MHGD+ Q +RE + +F+ R L+ T++ ARG+D+ +S +INYD+P
Sbjct: 258 ALINHGQDAVIMHGDLTQAQREKALYRFK-NFGRFLVATNVAARGLDIGGISDIINYDVP 316
Query: 550 TNRENYIHRIGRGGR 594
+ Y+HR+GR R
Sbjct: 317 DDPRVYVHRVGRTAR 331
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 134 bits (323), Expect = 2e-30
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 17/182 (9%)
Frame = +1
Query: 100 KMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKL 279
++L Q++ SAT D V E + + +P I +++EE TL+ I+QFYI +E K
Sbjct: 231 RLLPKGCQMLFFSATFEDSVWEFAERIIPEPNYIRLKREEETLDNIRQFYIMCGSKEEKF 290
Query: 280 ETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRT 459
LC+LY L+IAQ ++FC TRR WL ESM V + G+M +R ++ ++R
Sbjct: 291 SALCNLYGCLTIAQTIVFCQTRRMASWLAESMTREGHQVGVLSGEMTVEQRAAVIERYRE 350
Query: 460 GSSRVLITTDLLAR-----------GIDVQQVSCVINYDLP------TNRENYIHRIGRG 588
G +VL+TT++ +R GIDV+QV+ V+N+DLP + + Y+HRIGR
Sbjct: 351 GKEKVLVTTNVCSRAAGLRRRLHPSGIDVEQVTLVVNFDLPVDLKGRADNDTYLHRIGRS 410
Query: 589 GR 594
GR
Sbjct: 411 GR 412
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 134 bits (323), Expect = 2e-30
Identities = 67/197 (34%), Positives = 114/197 (57%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R + ++ L VLDEAD +L GFK+ + + + Q +L+SAT+P V +++ +
Sbjct: 138 RSIELDSLDLLVLDEADRILETGFKEALDQILTLCPEARQTLLVSATLPTSVRKLAERIL 197
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
++P + V ++ I+Q I + + K + LC L + S +AV+FCN++ + L
Sbjct: 198 QEPEWVRVGQKREVEANIEQRIILSDDQTLKDKQLCWLLENESYDKAVVFCNSKTEARRL 257
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ F + +HGD+ Q+ R + FR G++++L+TTDL ARG+D++ V VIN +
Sbjct: 258 DGFIRYHKFKAALLHGDVQQKGRFATIEGFRKGTTKILVTTDLAARGLDIEGVDLVINTE 317
Query: 544 LPTNRENYIHRIGRGGR 594
+P + YIHRIGR GR
Sbjct: 318 IPRKGDLYIHRIGRTGR 334
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 134 bits (323), Expect = 2e-30
Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD-PVRI 201
+ VLDEAD ML GF+ QI + + D Q ++ SAT P +V +++ + ++ PV +
Sbjct: 249 VTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYV 308
Query: 202 LVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDWLTESM 375
+ K EL + E IKQ + + K+ L D L+ V IF T++ + ++ +
Sbjct: 309 QIGKHELAINERIKQIVYVTDQSK-KINQLIKQLDCLTQKDKVLIFAQTKKGCESMSRIL 367
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
++ F A+HGD Q++R+ +M +F++G R+LI TD+ +RG+DV+ VS V NYD P
Sbjct: 368 NKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVASRGLDVKDVSHVFNYDFPKV 427
Query: 556 RENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 428 MEDYVHRIGRTGR 440
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 134 bits (323), Expect = 2e-30
Identities = 68/192 (35%), Positives = 116/192 (60%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
I+ FVLDE D+ L + + + +F QV+ SATM ++ +V + F+++PV I
Sbjct: 221 IQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEI 280
Query: 202 LVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ E +L L G+ Q Y+ ++ E+ K L ++ D L Q +IF + + L + +
Sbjct: 281 FIDDEAKLKLHGLLQHYVKLQ-EKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLT 339
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E +F A+HG ++Q+ER +F+ +R+L++TDL RGID+++V+ VINYD+P N
Sbjct: 340 ECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENS 399
Query: 559 ENYIHRIGRGGR 594
++Y+HR+GR GR
Sbjct: 400 DSYLHRVGRAGR 411
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
40; n=2; core eudicotyledons|Rep: Probable DEAD-box
ATP-dependent RNA helicase 40 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1088
Score = 134 bits (323), Expect = 2e-30
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ L VLDEAD ML GF+ QI + + Q ++ +AT P +V +++ + +PV++
Sbjct: 582 VSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVN 641
Query: 205 VQK-EELTLEGIKQFYIAI--ELE-EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
+ + +EL Y+ + ++E E +LE + + S + +IFC+T+R D L S
Sbjct: 642 IGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGS--KVIIFCSTKRLCDHLARS 699
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+ R F +HGD Q ER+ ++ QFR+G S VLI TD+ ARG+D++ + VINYD PT
Sbjct: 700 VG-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPT 758
Query: 553 NRENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 759 GVEDYVHRIGRTGR 772
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 134 bits (323), Expect = 2e-30
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
I VLDEAD+ML GF+ QI + + D Q ++ SAT P V +++ ++++P+ +
Sbjct: 390 ITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVY 449
Query: 205 VQKEELT-LEGIKQ-FYIAIELEEWK-LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
V +L + +KQ + E E+W ++T L S + ++F + + D L+ +
Sbjct: 450 VGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF--LQSMSSTDKVIVFVSRKAVADHLSSDL 507
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ +V ++HGD +QR+RE + F+TG R+LI TDL +RG+DV V+ V N+D P N
Sbjct: 508 ILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRN 567
Query: 556 RENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 568 IEEYVHRIGRTGR 580
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 133 bits (322), Expect = 3e-30
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ TI+LFVLDEAD++L F++Q++ ++ LS + Q++ LSAT P+ + + +MR+
Sbjct: 104 LKTGTIRLFVLDEADKLLDDTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMRE 163
Query: 190 PVRILVQKEELTLEGIKQFYIAI-------ELEEWKLETLCDLYDTLSIAQAVIFCNTRR 348
P+ + + ++L L GIKQ Y+ + + E K+ L + +S Q +IF N +
Sbjct: 164 PMFVRLNPKDLALRGIKQLYVELPGHSLPNKAFEIKVIKLLKILTQVSFNQCLIFSNLQT 223
Query: 349 KVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 528
+ L + + + + + G +Q +R M + + R+LI+TDL ARGID + V+
Sbjct: 224 RAQNLCDILCDSGWPSECISGAQEQSQRLSAMAKLKKFQCRILISTDLTARGIDAENVNL 283
Query: 529 VINYDLPTNRENYIHRIGRGGR 594
+IN D+PT+ + Y+HRIGR GR
Sbjct: 284 IINLDIPTDTKTYLHRIGRAGR 305
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 133 bits (322), Expect = 3e-30
Identities = 64/194 (32%), Positives = 117/194 (60%)
Frame = +1
Query: 13 RASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 192
+ ++I VLDEADEML+ GF + I + L + Q++L SATMP+++ +++ ++ DP
Sbjct: 192 KVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKYLNDP 251
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
IL++ + + I Q ++ ++ KL+ L + + L+ +IF T+ + E+
Sbjct: 252 AEILIKSVKKETQLISQKFLYVQRHH-KLDALKRILE-LNNEGVIIFVRTKLLTTSIAEA 309
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+ +V+ ++GD+ Q +RE + + + G +L+ TD+ ARG+DV+++ V+NYD P
Sbjct: 310 LENLGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVATDVAARGLDVERIKLVVNYDFPF 369
Query: 553 NRENYIHRIGRGGR 594
++E Y HRIGR GR
Sbjct: 370 DKETYTHRIGRTGR 383
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 133 bits (322), Expect = 3e-30
Identities = 66/197 (33%), Positives = 110/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+GL S +++FVLDEAD ML GF +I + +L Q +L SAT D V ++S+ +
Sbjct: 140 KGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKRHQTLLFSATFSDKVRKLSKLIL 199
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P I K+ T++ I Q ++ E+ K L + + + Q ++F T+ D L
Sbjct: 200 TKPAFIETSKKNSTVDTINQVAYLVDTEK-KAPLLAYIIGSRNFRQVLVFTRTKASADLL 258
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + +HGD Q R + +F+ G +VL+ TD+ +RG+D++++ VINY+
Sbjct: 259 VVELKKDGLKCGIIHGDKTQANRLKTLNEFKEGKIKVLVATDIASRGLDIEELPFVINYE 318
Query: 544 LPTNRENYIHRIGRGGR 594
LP+ E+Y+HR+GR GR
Sbjct: 319 LPSIPEDYVHRVGRTGR 335
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 133 bits (322), Expect = 3e-30
Identities = 69/190 (36%), Positives = 104/190 (54%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+K VLDEAD ML GF D++ D+ +VQ +L SAT PD V E++ +R+PV I
Sbjct: 150 LKALVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEIS 209
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V++E + + Q I ++ + L L Q +IF ++R + + ++
Sbjct: 210 VKQEATLPDQLHQRAIEVDRNN-RTMLLKHLIKQEKWQQLLIFVGSKRTANNIELKLYRS 268
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
S +HGD+ Q+ER + F G ++LI TDL ARGID+ + CV+NYDLP +
Sbjct: 269 GIQSSTLHGDLTQKERLGALEDFSKGRCKILIATDLAARGIDIPSLPCVLNYDLPRATSD 328
Query: 565 YIHRIGRGGR 594
Y+HR GR R
Sbjct: 329 YVHRAGRTAR 338
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 133 bits (322), Expect = 3e-30
Identities = 65/190 (34%), Positives = 101/190 (53%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ VLDE D ML GF + + + Q + SAT+P ++ +++ +RDPV I
Sbjct: 276 VEILVLDEVDRMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIK 335
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ + E I + + + K + L DL +IF T+ D + +
Sbjct: 336 IGQRRSPAETISHAFYPVVASQ-KFDLLIDLLSRTEFKSVIIFTRTKMGADRIAHRLQRE 394
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
TV +H D +QRER + F++G VL+ TD+ ARG+D+ VS VINYD+P N E+
Sbjct: 395 GHTVGVIHSDRNQRERVEALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENPED 454
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 455 YVHRIGRTGR 464
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 133 bits (322), Expect = 3e-30
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + L ++DEAD ML GF I+ + + L Q +L SAT P + E++ F D
Sbjct: 142 LTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKGRQSLLFSATCPPRIQELAATFQND 201
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDT--LSIAQAVIFCNTRRKVDWL 363
V + V+ E + I Q +I + KL L + D Q +IF T+R + L
Sbjct: 202 AVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKVLDEGKSETGQVIIFTRTKRSAEDL 261
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ ++++ + A+HGD Q R ++ +FR G +VL+ TD+ ARG+D+ ++ VINYD
Sbjct: 262 SIALNDAGYPSDALHGDKSQPVRNRVLSRFRRGDLKVLVATDVAARGLDIDGITHVINYD 321
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR GR
Sbjct: 322 LPQTAEDYVHRIGRTGR 338
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 133 bits (322), Expect = 3e-30
Identities = 74/191 (38%), Positives = 112/191 (58%), Gaps = 5/191 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + D QV++ SAT P ++ +++ F+R+ ++I +
Sbjct: 253 VLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSL 312
Query: 217 ELTL-EGIKQFYIAIELEEWKLET-LCDLYDTLSI---AQAVIFCNTRRKVDWLTESMHE 381
L E I Q E E++ ET L L LS ++++IF T+RKVD +T +
Sbjct: 313 NLAANENIMQIIECCE--EYEKETRLFKLLTELSQQGDSKSIIFVETKRKVDQITNVIKR 370
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ +HGD Q++R+ ++ FR S +L+ TD+ +RG+DV V VIN+D P N E
Sbjct: 371 NGWRCDGIHGDKTQKDRDYVLNTFRRLRSGILVATDVASRGLDVDDVKYVINFDFPNNTE 430
Query: 562 NYIHRIGRGGR 594
+YIHRIGR GR
Sbjct: 431 DYIHRIGRTGR 441
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 133 bits (321), Expect = 3e-30
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ DEAD M GF +Q+ D+ +ML Q++L SAT+P ++ E + ++ P I
Sbjct: 157 VEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILLFSATLPRNLAEFLKNTLKQPEIIR 216
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVDWLTESMHE 381
+ EE + F+ ++ E + L L D + Q V+FC TR +V++L E +
Sbjct: 217 LDTEERLSPDLDNFFYHVKEHEKEGHLLYLLLDLIGDKEQTVVFCATRHEVEYLNEILKI 276
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
D S M G DQ+ERE+ +++FR + VL+ TD+ ARG+D+ ++ VINYD P +
Sbjct: 277 FDIKTSIMFGKADQQEREINLKKFRKQETHVLLVTDVAARGVDIPELDNVINYDFPATPK 336
Query: 562 NYIHRIGRGGR 594
YIHR GR R
Sbjct: 337 LYIHRCGRVAR 347
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 133 bits (321), Expect = 3e-30
Identities = 70/187 (37%), Positives = 109/187 (58%)
Frame = +1
Query: 34 FVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQK 213
F+LDEADEML GF D + + + Q +L SATMP V E+ F+R+P + V
Sbjct: 173 FILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAG 232
Query: 214 EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFT 393
T+ ++Q Y ++ E K E + L +T +++F TR+ + L + + R F
Sbjct: 233 SNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFK 291
Query: 394 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIH 573
+A+HGD+ Q RE + + G +L+ TD++ARG+DV +++ V NYD+P + E+YIH
Sbjct: 292 AAALHGDIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIH 351
Query: 574 RIGRGGR 594
RIGR GR
Sbjct: 352 RIGRTGR 358
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 133 bits (321), Expect = 3e-30
Identities = 67/197 (34%), Positives = 112/197 (56%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ L+ +++ VLDEADEML+ GF + I + + Q+ L SATMP + +++ F+
Sbjct: 152 KSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRFL 211
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+DP I V + I Q+ + K+ L + + + +IF TR +
Sbjct: 212 KDPEHIKVAAVKKAKANITQYAWKVS-GITKMTALERIAEVVEYDAMIIFVRTRNDTVDI 270
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
E + + A++GD++Q +RE + Q ++G S +L+ TD++ARG+D+ ++S VINYD
Sbjct: 271 AEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYD 330
Query: 544 LPTNRENYIHRIGRGGR 594
LP + E Y+HRIGR GR
Sbjct: 331 LPGDNEAYVHRIGRTGR 347
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 133 bits (321), Expect = 3e-30
Identities = 64/190 (33%), Positives = 107/190 (56%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++FVLDEAD ML GF + + L Q +L SATMP ++ ++ + DP +I
Sbjct: 150 LEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQ 209
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ E +T++ + Q ++ K+ L ++ + +IFC T+ D + +++ +
Sbjct: 210 ITAETVTIDLVNQSVYHLDKSN-KVPLLFNILTKADYEKVLIFCKTKYGADIIVKALEKA 268
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
T +++H Q RE ++ F+ + RVL+ TD+ ARGIDV ++ VINY+LP + N
Sbjct: 269 SITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRN 328
Query: 565 YIHRIGRGGR 594
YIHRIGR R
Sbjct: 329 YIHRIGRTAR 338
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 133 bits (321), Expect = 3e-30
Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L+ + LDEADEML+ GF +++ + L D Q +L SAT+P D+ ++ R ++
Sbjct: 156 RTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLLFSATVPADIEQIIRDYL 215
Query: 184 RDPVRILVQKEELTLEGIKQ-FYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
DP IL+ +E ++E I Y A++ K L + + A++FCNTR
Sbjct: 216 TDPETILLSGDEYSVENIHNVMYPAVDAYP-KPRNLLYMIEMEEPETAIVFCNTRNDTSL 274
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ ++ + ++GD+ Q+ERE +M + + G R ++ TD+ ARGID+ ++ VINY
Sbjct: 275 VAAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFMVATDIAARGIDISDLTHVINY 334
Query: 541 DLPTNRENYIHRIGRGGR 594
LP + ++HR+GR GR
Sbjct: 335 SLPEDPAVFLHRVGRTGR 352
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 133 bits (321), Expect = 3e-30
Identities = 63/192 (32%), Positives = 112/192 (58%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
+K FV+DE D L + + ++F L + QV++ SATM D++ +V++ FM+D I
Sbjct: 185 VKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEI 244
Query: 202 LV-QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
V Q+ +LTL G+ QFY+ + E K L ++ D + QA+IF ++ + + L +
Sbjct: 245 YVDQRAKLTLHGLAQFYMNVTEPE-KTRRLAEILDVVEFNQAIIFTSSVERCEALNRQLQ 303
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ F A+H M Q ER + + ++R+++ TDL RG+D +++ V+ YD+ +
Sbjct: 304 QMKFPSQAVHSRMSQEERLRVYESCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEA 363
Query: 559 ENYIHRIGRGGR 594
++Y+HR+GR GR
Sbjct: 364 DSYLHRVGRAGR 375
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 133 bits (321), Expect = 3e-30
Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + + D QV++ SAT P +V ++ F+ D ++I +
Sbjct: 383 VLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSL 442
Query: 217 ELTLE-GIKQFYIAIEL--EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
L+ I Q E +E KL +L + ++ +IF T++KV+ L +++
Sbjct: 443 NLSANHNIHQIVDVCEEGEKEGKLLSLLKEISSDVNSKIIIFVETKKKVEDLLKNIVRDG 502
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 567
+ +++HGD Q ER+ +++ FR G S +L+ TD+ ARG+DV+ V VIN+D P + E+Y
Sbjct: 503 YGATSIHGDKSQSERDYVLQDFRHGKSTILVATDVAARGLDVEDVKYVINFDYPNSSEDY 562
Query: 568 IHRIGRGGR 594
IHRIGR GR
Sbjct: 563 IHRIGRTGR 571
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 133 bits (321), Expect = 3e-30
Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKD-QIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
+K+ VLDEAD +L + Q + K++S Q+I SAT + V + + D V++
Sbjct: 187 VKMIVLDEADILLDKDMMGTQTFRILKLISG-AQMIFFSATFSEQVKQTIEFYAPDAVKM 245
Query: 202 LVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
++ E IK FYI E E K L LY+ LSI+Q +IF +T+ V++L + + +
Sbjct: 246 YEERNGKPDE-IKLFYIEAEGEN-KRRALKSLYEYLSISQMIIFVSTKATVNYLRKKLED 303
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR- 558
+VS +HGD++ ERE + FR+ S++L+TTD+ +RG+D+ QV+ ++NYDLP R
Sbjct: 304 DLHSVSCLHGDLEIEEREKAVGDFRSSKSKILLTTDVFSRGMDIPQVNLIVNYDLPIYRG 363
Query: 559 ----ENYIHRIGRGGR 594
+ YIHRIGR GR
Sbjct: 364 VASTQTYIHRIGRSGR 379
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 132 bits (320), Expect = 5e-30
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 3/189 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + + + D Q ++ SAT PD V + + +++D ++I V
Sbjct: 239 VLDEADRMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSL 298
Query: 217 ELTLE-GIKQFY-IAIELE-EWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERD 387
+L I Q + E E E KL L + +IF T+++VD +T +
Sbjct: 299 KLAANHNILQIIDVCQEHEKEAKLSILLREIMAEKECKTIIFIETKKRVDDITRKVLRDG 358
Query: 388 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 567
+ +HGD QRERE + FR+G + +LI TD+ ARG+DV V VIN+D PT E+Y
Sbjct: 359 WPAMCIHGDKSQREREYTLNSFRSGKNPILIATDVAARGLDVDDVKFVINFDYPTTSEDY 418
Query: 568 IHRIGRGGR 594
IHRIGR GR
Sbjct: 419 IHRIGRTGR 427
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 132 bits (319), Expect = 6e-30
Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD ML GF+ QI + K + Q ++ +AT P +V +++ + +PV++
Sbjct: 378 VSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVN 437
Query: 205 VQKEELTL--EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + + + I Q+ I E L ++ +IFC+T+R D L ++
Sbjct: 438 IGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKIIIFCSTKRMCDQLARNL- 496
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
R + SA+HGD Q ER+ ++ +FR+G +L+ TD+ ARG+D++ + V+NYD PT
Sbjct: 497 ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRVVVNYDFPTGV 556
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 557 EDYVHRIGRTGR 568
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 132 bits (319), Expect = 6e-30
Identities = 68/195 (34%), Positives = 112/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
LR S IK VLDEADEML GF++ + + + + +L SAT+P ++++++ + +D
Sbjct: 144 LRLSDIKAVVLDEADEMLDMGFREDLTFILGKAPVERRTLLFSATVPTQIVKLAKTYQKD 203
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
VRI V ++ I I I+ + + + + +L ++ A++FCNTR V L
Sbjct: 204 SVRISVSSKKSQHLDISYHAIKIQPSD-RDKAVINLLRYHDVSGAIVFCNTRAAVTHLAS 262
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ R F+V A+ G++ Q+ER ++ R G + V + TD+ ARGID+ + VI+ DLP
Sbjct: 263 RLTNRGFSVVALSGELSQKERNFALQSMRAGKANVCVATDVAARGIDLPNLELVIHADLP 322
Query: 550 TNRENYIHRIGRGGR 594
+ E +HR GR GR
Sbjct: 323 QSNEAMLHRSGRTGR 337
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 132 bits (319), Expect = 6e-30
Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 9/204 (4%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S +++ VLDEADEML GF + + + D L SATMP + +V+R ++D
Sbjct: 184 LDLSHVRMLVLDEADEMLRMGFAEDVETIASSAPDDRLTALFSATMPAAIEKVAREHLKD 243
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLS---------IAQAVIFCNT 342
PV++ V E T++ I Q Y + + K+ L + T + A++F T
Sbjct: 244 PVKVAVSTESSTVDTIHQTYAVVPYKH-KIGALSRVLATRAQHIKEGQEEADAAIVFVRT 302
Query: 343 RRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 522
R V+ ++ + R F + + GD+ Q ERE ++ + + GS VL+ TD+ ARG+DV+++
Sbjct: 303 RADVEEVSLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDVLVATDVAARGLDVERI 362
Query: 523 SCVINYDLPTNRENYIHRIGRGGR 594
S V+N+D+P E Y+HRIGR GR
Sbjct: 363 SLVVNFDVPREPEAYVHRIGRTGR 386
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 132 bits (318), Expect = 8e-30
Identities = 71/192 (36%), Positives = 105/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S ++ VLDEAD+ML GF I + L D +L SATMP + + +R+P +
Sbjct: 153 SQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAK 212
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + T++ I Q + + + K L L T I QAV+F + + + +
Sbjct: 213 VEIAPPSSTVDRIAQSVMFLNASDKKAALLAQLR-TPGIGQAVVFTLQKNIANDVCTFLT 271
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E T A+HG+ Q +RE + FR G +VL+ TD+ ARGIDV V+ VIN+DLP+
Sbjct: 272 ESGITAEALHGNRSQGQRERALNAFREGDVQVLVATDIAARGIDVDTVTHVINHDLPSLP 331
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 332 ESYVHRIGRTGR 343
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 132 bits (318), Expect = 8e-30
Identities = 67/195 (34%), Positives = 112/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ I+ VLDEADEML GF D + V + Q+ L SATMP + V+ +R+
Sbjct: 145 LKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLRE 204
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I ++ + T E I+Q Y ++ + K + L + +T ++F T++ + + +
Sbjct: 205 PTEIRIKSKTATNESIEQKYWLVKGVD-KNQALLRICETSEFDAMMVFVRTKQATEEVAD 263
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
M A++GD+ Q +RE + + + G +L+ TD+ ARG+DV+++S V+NYD+P
Sbjct: 264 YMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDMLVATDVAARGLDVERISHVVNYDIP 323
Query: 550 TNRENYIHRIGRGGR 594
+ E+Y+HRIGR GR
Sbjct: 324 YDAESYVHRIGRTGR 338
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 132 bits (318), Expect = 8e-30
Identities = 67/195 (34%), Positives = 110/195 (56%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L+ + +K VLDE D ML GF + + + ++ Q +L SAT+ + + + +++
Sbjct: 193 LKLNQVKTLVLDEFDRMLDMGFVNDVKKLVGGMTQREQTMLFSATLEPNQKNLIQSLLKN 252
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV + + T E I+Q I + + K L DL+ ++ + ++F T+R D L++
Sbjct: 253 PVEVKINTGVSTNENIEQGIIRVPEGKDKFGMLADLFQNRAMDKVIVFTETKRLADRLSK 312
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+++ +HG+ Q R + QF++G +RVL+ TD+ ARGIDV VS VINY LP
Sbjct: 313 KLNQAGVKSGLIHGNKSQNFRNKTIEQFKSGETRVLVATDVAARGIDVADVSHVINYQLP 372
Query: 550 TNRENYIHRIGRGGR 594
++YIHRIGR GR
Sbjct: 373 MTMDSYIHRIGRTGR 387
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 132 bits (318), Expect = 8e-30
Identities = 85/225 (37%), Positives = 122/225 (54%), Gaps = 28/225 (12%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRG--FKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 177
R +KL V+DEADEM+ Q+ + K ++Q++L SAT ++V +
Sbjct: 245 RSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILLFSATYHEEVRLFAEK 304
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
+ + +I V+KEELTL I+QFY+ + KL L DLY +SI Q++IF NTR+
Sbjct: 305 IVPNANKINVKKEELTLNTIQQFYVICNDDADKLSFLSDLYACMSIGQSIIFVNTRKTAF 364
Query: 358 WLTESMHERDFTVSAMHG-------DMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQ 516
+ E+M +S + G MD R+ +M FR+G S+VLI TD+L+RGIDV
Sbjct: 365 SIAENMRRDGHAISVICGTQTNSGEKMDHEIRDQVMDSFRSGESKVLIATDVLSRGIDVP 424
Query: 517 QVSCVINYDLP-----TN--------------RENYIHRIGRGGR 594
QV+ VIN+D+P TN E Y+HRIGR GR
Sbjct: 425 QVTLVINFDIPVRFNSTNSIDIVNQISSVQVENETYLHRIGRTGR 469
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 131 bits (317), Expect = 1e-29
Identities = 67/197 (34%), Positives = 111/197 (56%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ + S ++ VLDEAD ML GF I V +LS Q ++ SAT ++ +++ +
Sbjct: 149 KAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSATFSGEIRKLADSLL 208
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+ PVRI + E I ++ + K L L ++ QA+IF T+ L
Sbjct: 209 KQPVRIEAAVQNTVNESISHVIHWVKPDS-KFALLLHLIRQQNLKQALIFVKTKHGASHL 267
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + + + A+HGD +Q++R + +F+ G ++L+ TD+ ARGID++++S VINY+
Sbjct: 268 AQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQILVATDVAARGIDIEKLSHVINYE 327
Query: 544 LPTNRENYIHRIGRGGR 594
LP N E+Y+HRIGR GR
Sbjct: 328 LPGNPEDYVHRIGRTGR 344
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 131 bits (317), Expect = 1e-29
Identities = 73/192 (38%), Positives = 104/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S++ FVLDEAD ML GF I + K+L A Q + SATMP ++ ++ + P +
Sbjct: 144 SSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSMLTKPEK 203
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V T++ I Q +E +E K + L L SI +IF T+ D L +
Sbjct: 204 VEVTPASSTVDIISQQVYFVEKKE-KKDLLIHLLKDTSIESVLIFTRTKYGADKLARVLT 262
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ A+HG+ Q R+ + F+ + R LI TD+ ARGIDV Q+S VINY+LP
Sbjct: 263 KAGIGAEAIHGNKTQNARQRALTNFKNHTLRALIATDIAARGIDVDQLSHVINYELPNVP 322
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 323 ETYVHRIGRTGR 334
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 131 bits (317), Expect = 1e-29
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQVILLSATMPDDVLEVSRCFM-RDP 192
S +K +LDEADEMLS GFK ++ + K + +D + L SATMPD++ + + +M +
Sbjct: 146 SHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDRKTWLFSATMPDEIKRIVKTYMDANA 205
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
RI + K L I+ + L+E K+ + + + +IFC T+ L +
Sbjct: 206 PRIEINKNTLVNANIRHQFAKTTLKE-KVADIVTFLEKRQAQRGIIFCRTKAGAQNLAKQ 264
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+ + F+ +A+ GDM Q+ER+ +MR F+ S + LI+TD+ ARGIDV+++ VI++ LP
Sbjct: 265 LVDEGFSAAALEGDMQQKERDKVMRAFKNESLQYLISTDVSARGIDVRELEFVIHHQLPE 324
Query: 553 NRENYIHRIGRGGR 594
E Y HR GR R
Sbjct: 325 QLEYYTHRSGRTAR 338
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 131 bits (317), Expect = 1e-29
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVLEVSRCFMRDP 192
I+ VLDEAD ML GF+ QI + + + Q ++ SAT P ++ ++ F++D
Sbjct: 366 IRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDY 425
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
+ + V K T + I Q + ++ E + L L D S + ++F T+R D L
Sbjct: 426 LFLRVGKVGSTSQNITQRIVYVDENEKRDHLLDILTDIDSDSLILVFVETKRGADALEGF 485
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+H V+++HGD Q +RE+ ++ FR GS+ +L+ T + ARG+D+ V VINYDLPT
Sbjct: 486 LHTEGSCVASIHGDRSQSDRELALQSFREGSTPILVATRVAARGLDIPNVKFVINYDLPT 545
Query: 553 NRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 546 DIEEYVHRIGRTGR 559
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 131 bits (317), Expect = 1e-29
Identities = 65/190 (34%), Positives = 108/190 (56%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD +L GF+ QIH++ D Q ++SAT P+ + +++ + P+ I+
Sbjct: 820 VSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEII 879
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V ++ T I QF +E + L L + S +IF N + + D L + +
Sbjct: 880 VGEKGKTNNNIYQFVEVLEGGKKIYRLLKLLGEWSSYGLILIFVNRQLEADLLYLELFKY 939
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
D+ +HG DQ +RE ++ F+ G +++LI T ++ARGID++ + VINY+ P + E+
Sbjct: 940 DYKTLVLHGGQDQADREFTLQTFKEGKNKILIATSVMARGIDIKDIIVVINYECPDHLED 999
Query: 565 YIHRIGRGGR 594
YIHR+GR GR
Sbjct: 1000 YIHRVGRTGR 1009
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 131 bits (316), Expect = 1e-29
Identities = 59/192 (30%), Positives = 112/192 (58%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
ST+ V+DEADEML+ GF D I+ + + + +L SATM ++ +S+ ++++
Sbjct: 145 STVHNIVMDEADEMLNMGFTDSINAILADVPKERNTLLFSATMSPEIARISKNYLQNAKE 204
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I + ++ + +K ++ ++ K L + D +IFC TR++ + + +
Sbjct: 205 ITIGRKNESTSNVKHVAYTVQAKD-KYAALKRIVDYYPQIYGIIFCRTRKETQEIADKLM 263
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ + ++HG++ Q +R+ +M++FR + ++L+ TD+ ARG+DV ++ VINY LP +
Sbjct: 264 QEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATDVAARGLDVDDLTHVINYGLPDDT 323
Query: 559 ENYIHRIGRGGR 594
E+Y HR GR GR
Sbjct: 324 ESYTHRSGRTGR 335
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 131 bits (316), Expect = 1e-29
Identities = 70/198 (35%), Positives = 112/198 (56%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
+ L+ + + VLDEAD MLS GF D+++ V + L A Q +L SAT P++V ++
Sbjct: 152 SNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPAKKQTLLYSATFPEEVRALTAKL 211
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
+ P+ +Q E+ + I+Q I + E+ K L L +QA+IF + + +
Sbjct: 212 LHQPLEYHLQSEQEST--IEQRVITVNREQ-KTALLAHLIKQHQWSQALIFVSAKNTCNH 268
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
L + + +R + HGD Q R ++ F++G VLI TD+ ARGID+ ++ VIN+
Sbjct: 269 LAQKLSKRGISAEVFHGDKAQGARTRVLDGFKSGDISVLIATDIAARGIDIDKLPVVINF 328
Query: 541 DLPTNRENYIHRIGRGGR 594
DLP + +Y+HRIGR GR
Sbjct: 329 DLPRSPADYMHRIGRSGR 346
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 131 bits (316), Expect = 1e-29
Identities = 71/194 (36%), Positives = 108/194 (55%)
Frame = +1
Query: 13 RASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDP 192
R I+ VLDEAD ML GFK Q+ + + L Q +L SATM +V + +R +RDP
Sbjct: 142 RLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQRQTLLFSATMAGEVADFARAHLRDP 201
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
VR+ V + T +Q + E KL L L + + +IF T+R+ D + +
Sbjct: 202 VRVEVARSGTTAARAEQQVFLADQHE-KLPLLLTLLERDGDS-TLIFTRTKRRADKIWKH 259
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+ V+ +H D Q +R + + F+ G+ RVL+ TD+ ARGIDV ++ V+N+DLP
Sbjct: 260 IGRAGHKVARIHADRSQAQRRMALDGFKDGTYRVLVATDIAARGIDVAEIGHVVNFDLPH 319
Query: 553 NRENYIHRIGRGGR 594
E+Y+HR+GR R
Sbjct: 320 VPEDYVHRVGRTAR 333
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 131 bits (316), Expect = 1e-29
Identities = 67/197 (34%), Positives = 109/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R + +KL VLDEAD ML GF+D + +F VQ +L SAT + + V++ ++
Sbjct: 141 RRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTLLFSATFTEQIERVAKQYL 200
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+PV V+ +E I Q + L + + L + A++FCN + +V+ +
Sbjct: 201 HNPVTCKVESQE-NKPAITQLGYNV-LPHTRTQALKAVLTEYQPKNAIVFCNRKTQVNDV 258
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + E F+ + GDM+Q +R ++ QF + S +VL+ TD+ ARG+D+ V+CVINY
Sbjct: 259 VDELIEDGFSAKGLQGDMEQHQRTSVLMQFASDSLQVLVATDVAARGLDIDDVACVINYT 318
Query: 544 LPTNRENYIHRIGRGGR 594
+ E +IHRIGR R
Sbjct: 319 VSEEPETHIHRIGRTAR 335
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 131 bits (316), Expect = 1e-29
Identities = 74/198 (37%), Positives = 111/198 (56%), Gaps = 3/198 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM-R 186
L S + V+DEAD +L GF+D + + + D Q + SAT P V +S F
Sbjct: 247 LDLSKVTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCAE 306
Query: 187 DPVRILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAV-IFCNTRRKVDW 360
DP+ + V + LT+ + I Q I + + KL+TL D+ D L I V IF TR +
Sbjct: 307 DPIYVQVGRSNLTVNKNIDQEIICLYNNQ-KLQTLLDILDQLKINDKVLIFAETRISCEQ 365
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
L+ M + + A+HG+ Q +R+ IM ++ G +++L TDL +RG+DV ++ VINY
Sbjct: 366 LSVDMTQEGYYAVALHGNKTQGQRDSIMECYKKGDTKLLCATDLASRGLDVSDITVVINY 425
Query: 541 DLPTNRENYIHRIGRGGR 594
D P ++YIHRIGR GR
Sbjct: 426 DFPKYFDDYIHRIGRTGR 443
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 131 bits (316), Expect = 1e-29
Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S + VLDEAD ML GF+ Q+ + +A+ Q ++ SAT P +V ++ +M + ++
Sbjct: 233 SRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQ 292
Query: 199 ILVQKEEL-TLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
++V EEL T IKQ E K + L + D + ++FCN +R D L +
Sbjct: 293 VVVGNEELKTNSKIKQIVEVCSGRE-KEDKLIGVLDNFKGDKVIVFCNMKRTCDDLEYVL 351
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ + +A+HGD Q R+ ++ FR+G +LI T++ RG+DV V VIN+D P +
Sbjct: 352 NRSGYGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVNDVKLVINFDFPGS 411
Query: 556 RENYIHRIGRGGR 594
E+Y+HRIGR R
Sbjct: 412 CEDYVHRIGRTAR 424
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 130 bits (315), Expect = 2e-29
Identities = 69/196 (35%), Positives = 111/196 (56%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GL + ++ V+DEAD ML GF + + +L + Q + SATM ++ ++ F++
Sbjct: 363 GLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQ 422
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+P I V K I +A+ E K + L L + A+IFCN +R VD LT
Sbjct: 423 NPKEITVAKPASVATTITSG-LALVGEMDKRKALRHLLRQEKVQNALIFCNRKRDVDILT 481
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+S+ + F +HGD+ Q R + +F+ GS ++L+ +D+ ARGID+ +S V N+D+
Sbjct: 482 KSLVKHGFAAGPLHGDLAQSLRFSTLEKFKAGSLQLLVCSDVAARGIDIGGLSHVFNFDV 541
Query: 547 PTNRENYIHRIGRGGR 594
P + E+Y+HRIGR GR
Sbjct: 542 PIHAEDYVHRIGRTGR 557
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 130 bits (315), Expect = 2e-29
Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 1/197 (0%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GL +K+ +LDEAD + G QI + + + + Q +L+SATMP + S+ +
Sbjct: 144 GLSLIAVKIIILDEADRLFEMGLASQIEKILESIPKNRQCVLVSATMPTALASFSKVMLN 203
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTL-SIAQAVIFCNTRRKVDWL 363
+P I + + + E +K ++ + +E L L +T+ S +A+IFC T+ VD++
Sbjct: 204 EPEVIQIDSDYILSETLKLTFLFVREDEKLASLLYLLRNTIPSHERAIIFCATKHHVDYI 263
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + + VS ++G+MDQ R + + FR SR L+ TD+ ARG+D+ + VIN+D
Sbjct: 264 VKILESNNIIVSYIYGNMDQEARTMHLSTFRKNKSRALVVTDIAARGVDIPMIKYVINFD 323
Query: 544 LPTNRENYIHRIGRGGR 594
P + + ++HR GR R
Sbjct: 324 FPLSPKLFVHRTGRTAR 340
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 130 bits (314), Expect = 2e-29
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
IK VLDEAD ML GF D I V L + Q I+ SATMP + ++ M+DP +I
Sbjct: 148 IKHLVLDEADRMLDMGFYDDIVRVISYLPTERQTIMFSATMPTKMRALANKLMKDPQQIN 207
Query: 205 VQKEELTLEGI-KQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
+ + EGI +Q Y+ E ++ KL + + + + +IF +T+ V L +
Sbjct: 208 IAISK-PAEGILQQAYLVYEEQKNKL--IKHILSSGNFNSIIIFSSTKEHVKKLERDLSN 264
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
F++ H D++Q ERE IMR F++ ++LI TD+L+RGID+ + VIN ++P + E
Sbjct: 265 MGFSLKGFHSDLEQEEREEIMRAFKSRQLQMLIGTDILSRGIDIDGIDLVINAEVPGDAE 324
Query: 562 NYIHRIGRGGR 594
NYIHRIGR R
Sbjct: 325 NYIHRIGRTAR 335
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 130 bits (314), Expect = 2e-29
Identities = 69/192 (35%), Positives = 104/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S K FVLDEAD ML GF + + L Q I +ATMP V +++ + +PVR
Sbjct: 142 SQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNNPVR 201
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I V E T E ++Q + + + K L + + ++F T+ D L + ++
Sbjct: 202 IEVAPESTTAERVEQRLMYVSQGD-KRALLEHSLQAEGVGRTLVFTKTKHGADRLAKELN 260
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
A+HG+ Q +R + FR+G +VL+ TD+ ARGIDV V+ V+N+DLP +
Sbjct: 261 ASGIRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAARGIDVDGVTHVVNFDLPIDP 320
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 321 ESYVHRIGRTGR 332
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 130 bits (314), Expect = 2e-29
Identities = 65/197 (32%), Positives = 110/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ ++ + +++ VLDEAD ML GF I + ML A Q ++ SAT D++ E+++ +
Sbjct: 141 KAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLV 200
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
PV I V +KQ+ ++ + K L L Q ++F T+ + L
Sbjct: 201 NQPVEISVTPRNAAANTVKQWICPVDKNQ-KSALLIQLIKQEDWQQVLVFSRTKHGANRL 259
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+S+ + + + +A+HG+ Q R + F++G RVL+ TD+ ARG+D+ Q+ V+N+D
Sbjct: 260 AKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFD 319
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR GR
Sbjct: 320 LPNVPEDYVHRIGRTGR 336
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 130 bits (314), Expect = 2e-29
Identities = 68/202 (33%), Positives = 124/202 (61%), Gaps = 12/202 (5%)
Frame = +1
Query: 25 IKLFVLDEADEMLSR-GFKDQIHDVFK---MLSADVQVILLSATMPDDVLEVSRCFMRDP 192
+K+ V DEAD ML+ GF+D + K ++ + QV+L SAT + V + ++DP
Sbjct: 239 LKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDP 298
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCD-LYDTLSIAQAVIFCNTRRKVDWLTE 369
++ V++E+L L+ +KQ+ + E+ K+E + D + + I Q +IF T+ + +
Sbjct: 299 NQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHK 358
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
++ E + V+++HG++ + +R+ I+++F+ ++VLI TD++ARG D Q+V+ V+NY+LP
Sbjct: 359 ALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLP 418
Query: 550 TNREN-------YIHRIGRGGR 594
T E Y+HR+GR GR
Sbjct: 419 TKYETGEPDYEVYLHRVGRAGR 440
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 130 bits (314), Expect = 2e-29
Identities = 65/190 (34%), Positives = 109/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ V+DEAD ML GF D I DV + A Q +L SAT P+ + +S RDP+ I
Sbjct: 147 LNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIE 206
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ + +QFY + K+ L L + V+FCNT++ + ++++E
Sbjct: 207 IDSTDALPPIEQQFYETSS--KGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEV 264
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ ++HGD++QR+R+ + +F GS+RVL+ TD+ ARG+D++ + V+N++L + E
Sbjct: 265 GQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEV 324
Query: 565 YIHRIGRGGR 594
++HRIGR R
Sbjct: 325 HVHRIGRTAR 334
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 130 bits (313), Expect = 3e-29
Identities = 67/192 (34%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Frame = +1
Query: 22 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV-QVILLSATMPDDVLEVSRCFMRDPVR 198
T K VLDEAD++LS D + + Q++L SAT P + + + +M +P+
Sbjct: 153 TCKTLVLDEADKLLSGEVYDTTLKILNHYKNKISQIMLFSATFPYHIQNIKKMYMNNPIE 212
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + E L LE I QFY A E K++ + ++ ++I Q+V FCN+ +V+ L + +
Sbjct: 213 VNLMNE-LVLEKISQFY-AYTSENKKIQCIKNILSKVNINQSVFFCNSVNRVELLAKKIT 270
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ + +H M R I FR G S++L+++DL+ RGID+ ++ V+N+DLP +
Sbjct: 271 DFGYPCYFIHAKMRLDIRNKIFHDFRIGKSKLLVSSDLITRGIDIPNINLVVNFDLPLSS 330
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 331 ESYLHRIGRTGR 342
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 130 bits (313), Expect = 3e-29
Identities = 64/190 (33%), Positives = 109/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD +L GF+ QI+++ + D Q ++SAT P+ + +++ + P+ I+
Sbjct: 874 VSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEII 933
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V ++ T I QF IE + L L + + +IF N + + D L +++
Sbjct: 934 VGEKGKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKY 993
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
D+ + +HG DQ +R+ + +F+ ++VLI T ++ARGID++ + VINY P + E+
Sbjct: 994 DYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIED 1053
Query: 565 YIHRIGRGGR 594
YIHRIGR GR
Sbjct: 1054 YIHRIGRTGR 1063
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 130 bits (313), Expect = 3e-29
Identities = 62/190 (32%), Positives = 109/190 (57%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ VLDEAD ML GF D + ++ +D Q ++ SAT+ D+ +S +M +P ++
Sbjct: 143 VEILVLDEADRMLDMGFIDDVEEIIDECPSDRQTMMFSATVSKDIQYLSSKYMNNPSKVF 202
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
K + + +KQ YI + ++ K L L + ++FCNTR VD++ +++ +
Sbjct: 203 A-KAYVDSDKLKQVYIDVP-KKMKFSLLVHLLKSEKSGLVMVFCNTRSNVDFVQKNLRKN 260
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
D A+HG Q +R+ + +F + ++ L+ TD+ ARG+D+ VS V N+D+P +
Sbjct: 261 DIDAIAIHGGHTQAKRKSTLSKFHSSNAHALVCTDVAARGLDIPHVSHVYNFDIPDDPSE 320
Query: 565 YIHRIGRGGR 594
Y+HRIGR R
Sbjct: 321 YVHRIGRTAR 330
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 130 bits (313), Expect = 3e-29
Identities = 73/210 (34%), Positives = 123/210 (58%), Gaps = 15/210 (7%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFM 183
L IKLFV+DEADEML GF++Q+ +F+ ++ +VQ+ + SAT ++ L VS +
Sbjct: 176 LSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRITNKDEVQIAMFSATYDEEELRVSEEIL 235
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEW-----------KLETLCDLYDTLSIAQAVI 330
+PV I ++ + TL+GI+Q++I + E KL TL D++ + Q+++
Sbjct: 236 INPVIIDLRYNDQTLKGIRQYFIDLRKEPPFRKGREDYLLPKLVTLYDIFRKQRLGQSIV 295
Query: 331 FCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 510
F N++ + + + ++ + ++ Q ERE + +FR G+ R LI++ LL+RGID
Sbjct: 296 FINSKEDARIVYDWLIRHEWECELISAELTQAERERTLNRFRGGTGRCLISSGLLSRGID 355
Query: 511 VQQVSCVINYDLPT--NRENYIHRIGRGGR 594
+Q +S V D+P+ + YIHRIGR GR
Sbjct: 356 IQNLSVVFCLDVPSFERKSTYIHRIGRSGR 385
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 129 bits (312), Expect = 4e-29
Identities = 64/195 (32%), Positives = 107/195 (54%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + + VLDE D M GF QI + K L Q ++ SAT+P D+++++ +
Sbjct: 141 LITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPKMRQNLMFSATLPGDIVKLAEKYSNQ 200
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P R+ V+ E T IKQ I E + + LY ++F T+++ D L
Sbjct: 201 PERVSVENEATTSVKIKQEIIYASESEKYGKLVTQLYQRKG--SIIVFVRTKQRADQLAY 258
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + + + A+HGD+ QR+R+ ++ FR G +++++ TD+ +RG+D+ + VINYD P
Sbjct: 259 KLRKDNHSALAIHGDLKQRKRKRVINSFRRGHNQIMVATDVASRGLDIPHIQHVINYDAP 318
Query: 550 TNRENYIHRIGRGGR 594
++ NYIHR GR R
Sbjct: 319 ESQANYIHRTGRTAR 333
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 129 bits (312), Expect = 4e-29
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV-LEVSRCFMR 186
L +K VLDEADEM++ GFK +I ++ K + +L +ATMP DV L + +
Sbjct: 40 LSLDDLKYLVLDEADEMINMGFKAEIDEILKSCKPAITKLLFTATMPKDVKLLIEEYLVA 99
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
D I + KEEL E I+ + + E KL+ L + + ++FC T+ L
Sbjct: 100 DASEIRINKEELVNEKIQHYLLMFE-NGMKLDYLKAFLNERLDQRGILFCRTKIAAKRLA 158
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ + D A+HG+++Q RE ++R F+ +L+ TD+ ARGIDV+ + +I+Y L
Sbjct: 159 KQLAGFDVVAGAIHGNLNQESREKVLRGFKKNRINLLVATDIAARGIDVKDLDYIIHYRL 218
Query: 547 PTNRENYIHRIGRGGR 594
P N E Y HR GR R
Sbjct: 219 PENAEQYTHRSGRTAR 234
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 129 bits (312), Expect = 4e-29
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
++I VLDEAD ML GF+ QI + + D Q I+ SAT P V +++ +M +PV+
Sbjct: 470 TSITYLVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQ 529
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVDWLTESM 375
+ V +L I + EE K + + + + + +IFC + + D L+
Sbjct: 530 VYVGTLDLAATHTVTQQIEVIDEEDKYMRVMNFVTNMGPSDKVIIFCGRKTRADDLSSEF 589
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+++HGD +Q +RE + ++G RVLI TD+ +RG+D++ +S V+NYD P N
Sbjct: 590 VLSGINCTSLHGDREQADREQALEDIKSGDVRVLIATDVASRGLDIEDISHVVNYDFPRN 649
Query: 556 RENYIHRIGRGGR 594
E Y+HR+GR GR
Sbjct: 650 IEEYVHRVGRTGR 662
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 129 bits (312), Expect = 4e-29
Identities = 71/206 (34%), Positives = 121/206 (58%), Gaps = 11/206 (5%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRC 177
L S+I+LFVLDEAD++L S F++QI+ ++ L A+ Q++ LSAT P+ + +
Sbjct: 164 LMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSR 223
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAI-------ELEEWKLETLCDLYDTLSIAQAVIFC 336
+MR+P + + + L G+KQ+Y + ++ E K+++L +L+ + QA++F
Sbjct: 224 YMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFS 283
Query: 337 NTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQ 516
N + L + + + + G + Q +R M + + RVLI+TDL +RGID +
Sbjct: 284 NLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAE 343
Query: 517 QVSCVINYDLPTNRENYIHRIGRGGR 594
+V+ VIN D+P + E Y+HRIGR GR
Sbjct: 344 KVNLVINLDVPQDWETYMHRIGRAGR 369
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 129 bits (311), Expect = 6e-29
Identities = 70/198 (35%), Positives = 107/198 (54%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
+RGL S +K ++DEADEML GF + I + + + Q L SAT+P + ++S F
Sbjct: 142 SRGLDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPTHRQTALFSATLPVSIRKLSYKF 201
Query: 181 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 360
M +P I + IKQ Y + K E L + +IF T+
Sbjct: 202 MCNPKEIYINPSISACADIKQSYWLVHGIS-KHEALMRFLEVEKFEAVIIFVRTKSATLQ 260
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
++E + + +A++GDM+Q R + + R G+ +LITTD+ ARG+D+ ++S VINY
Sbjct: 261 ISEILQRFGYNSAALNGDMNQSVRCKTISRLRCGTLDILITTDVAARGLDINRISFVINY 320
Query: 541 DLPTNRENYIHRIGRGGR 594
D+P N Y+HRIGR GR
Sbjct: 321 DIPCNYNAYVHRIGRTGR 338
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 129 bits (311), Expect = 6e-29
Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 8/198 (4%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+K+ V+DEAD ML GF I +F ++ Q + SATM ++ ++ F+ +P +I
Sbjct: 157 VKVMVVDEADRMLDMGFIPDIERIFGLVPFTRQTLFFSATMAPEIERITNTFLSNPEKIE 216
Query: 205 VQKEELTLEGIKQFYIAIEL--EEWKLETLCDLYDTLSIAQ------AVIFCNTRRKVDW 360
V+++ T I+Q I + + + + D+ A+ A+IFCN + VD
Sbjct: 217 VERQSTTSATIEQRLIEFKAPRRDAQAKMKRDMLRAAITAEGDAFRNAIIFCNRKVDVDI 276
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ +S+ + + +HGD+DQ R + FR GS +L+ +D+ ARG+D+ VS VINY
Sbjct: 277 VAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFRDGSITLLVASDVAARGLDIPNVSHVINY 336
Query: 541 DLPTNRENYIHRIGRGGR 594
D+P++ E+Y+HRIGR GR
Sbjct: 337 DVPSHAEDYVHRIGRTGR 354
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 129 bits (311), Expect = 6e-29
Identities = 75/204 (36%), Positives = 120/204 (58%), Gaps = 14/204 (6%)
Frame = +1
Query: 25 IKLFVLDEADEMLSR-GFKDQIHDVFKMLSADV---QVILLSATMPDDVLEVSRCFMRDP 192
IK+ V DEAD ML+ GF+ + + + QV+L SAT + V + ++D
Sbjct: 248 IKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTRVIKDG 307
Query: 193 VRILVQKEELTLEGIKQFYIAIELEEWKLETLCD-LYDT-LSIAQAVIFCNTRRKVDWLT 366
+I V+KEELTLE +KQ+ + + E K+ + D +++ + Q +IF T++ +
Sbjct: 308 NQIFVKKEELTLEKVKQYKVQVPDERAKIAVIKDKIFEFGQKVGQVIIFVRTKQSTKDVH 367
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
++ D+ S++ G +DQ ERE I+++F+ G ++VLI+TD+LARG D QV+ VINYD+
Sbjct: 368 NALTLEDYVCSSIQGSLDQSEREKIIQEFKNGYTKVLISTDVLARGFDQAQVNLVINYDM 427
Query: 547 P--------TNRENYIHRIGRGGR 594
P + E Y+HRIGR GR
Sbjct: 428 PIKFGTRDEPDYEVYLHRIGRAGR 451
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 129 bits (311), Expect = 6e-29
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD ML GF+ Q+ + + D Q ++ SAT P ++ ++ F + +RI
Sbjct: 249 VTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRIS 308
Query: 205 VQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE 381
V EL + + Q +I + E K + L L + ++FC +R D L +
Sbjct: 309 VGSTELQANKDVTQRFILTQ-EFAKQDELRKLMQEHREERVLVFCKMKRTADELERQLRR 367
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
+ A+HGD +QR+RE I+ +FR L+ TD+ ARG+D++Q+ VINYD P +
Sbjct: 368 WGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFPMQID 427
Query: 562 NYIHRIGRGGR 594
+Y+HRIGR GR
Sbjct: 428 DYVHRIGRTGR 438
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 129 bits (311), Expect = 6e-29
Identities = 70/188 (37%), Positives = 107/188 (56%)
Frame = +1
Query: 31 LFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQ 210
+ V DEAD++L F + + + +L + Q++L SAT P V R +M++P+ I +
Sbjct: 253 ILVFDEADKLLDVTFGETVTKLLDLLPREKQMLLYSATFPYFVTGFIRRYMKNPLCINLM 312
Query: 211 KEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDF 390
KE L G+KQFY ++ E KL L L LSI Q VIFCN+ + V+ L + E
Sbjct: 313 KE-LAPVGVKQFYTYVKPSE-KLLCLKSLLLRLSINQCVIFCNSIKTVELLAMKITEMGL 370
Query: 391 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
+H M Q +R ++ F G ++L+ TDL+ RG+D + VIN+D+ + E+Y+
Sbjct: 371 PSYFIHSKMAQEDRNIVFHNFLKGKCKILVATDLITRGVDAPNTNYVINFDISKSPESYL 430
Query: 571 HRIGRGGR 594
HRIGR GR
Sbjct: 431 HRIGRAGR 438
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 128 bits (310), Expect = 7e-29
Identities = 64/195 (32%), Positives = 109/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
++ + +++ VLDEAD ML GF I + +L A Q ++ SAT D++ E+++ +
Sbjct: 143 VKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQ 202
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV I V +KQ+ ++ + K L L Q ++F T+ + L +
Sbjct: 203 PVEISVTPRNAAANTVKQWICPVDKNQ-KSALLIQLIKQEDWQQVLVFSRTKHGANRLAK 261
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
S+ + + + +A+HG+ Q R + F++G RVL+ TD+ ARG+D+ Q+ V+N+DLP
Sbjct: 262 SLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLP 321
Query: 550 TNRENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 322 NVPEDYVHRIGRTGR 336
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 128 bits (310), Expect = 7e-29
Identities = 71/197 (36%), Positives = 106/197 (53%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R + + I VLDEADEML GF D + + + +V L SATMP V +++ +
Sbjct: 146 RSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFSATMPKRVRDIANKHL 205
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+P I V T E I+Q Y + KLE L L ++F TR +
Sbjct: 206 SNPAEISVAAAATTNENIEQCYWLAKGAS-KLEALKRLLAFEDTEGVIVFTRTRESTTVI 264
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
E + + S ++GDMDQ+ R + ++G+ VL+ TD+ ARG+DV++++ VINYD
Sbjct: 265 AEQLRQTGLKASPLNGDMDQKMRLRTVSDLKSGALDVLVATDVAARGLDVERITHVINYD 324
Query: 544 LPTNRENYIHRIGRGGR 594
+P + E Y+HRIGR GR
Sbjct: 325 VPFDEEAYVHRIGRTGR 341
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 128 bits (310), Expect = 7e-29
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 9/201 (4%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S I VLDEAD ML GF+ QI ++ + L Q +L SATMP ++ +++ ++ +PV+
Sbjct: 265 SRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQ 324
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQ--------AVIFCNTRRK 351
+ V K + Q + + E K++ L DL + S A+ ++F + +
Sbjct: 325 VKVGKVSSPTTNVSQTLVKVSGSE-KIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTR 383
Query: 352 VDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCV 531
D + E++ + + ++HG Q ERE ++ FR+ S+ +L+ TD+ +RG+DV VS V
Sbjct: 384 CDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDVASRGLDVTGVSHV 443
Query: 532 INYDLPTNRENYIHRIGRGGR 594
IN DLP E+YIHRIGR GR
Sbjct: 444 INLDLPKTTEDYIHRIGRTGR 464
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 128 bits (310), Expect = 7e-29
Identities = 65/193 (33%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM--RDPVR 198
+ VLDEAD ML GF+ Q+ + + D Q + SAT P V ++ C + +P+
Sbjct: 216 VTYLVLDEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLA-CDLCHNEPIN 274
Query: 199 ILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
+ + +E+T+ + I Q I + E + E L L + + + +IF T++ + L +
Sbjct: 275 LYIGSQEVTINKNITQETICLYQNEKQEELLYILEELSNKDKVLIFVETKKDCEDLASYL 334
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
E F ++HGD Q++R+ +M++F+ ++L TD+ +RG+DV+ +S VINYD P
Sbjct: 335 SEHGFFCMSLHGDKTQQQRDYVMKEFKASKCKLLCATDVASRGLDVRDISLVINYDFPNQ 394
Query: 556 RENYIHRIGRGGR 594
+NY+HRIGR GR
Sbjct: 395 IDNYVHRIGRTGR 407
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 128 bits (310), Expect = 7e-29
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD M GF+ Q+ + + D Q +L SATMP V +++R + DP+R+ V +
Sbjct: 380 VLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEV 439
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCD-LYDTLSIAQAVIFCNTRRKVDWLTESMHERDFT 393
+ E I Q I + KL L + L + ++F + + VD + + F
Sbjct: 440 GMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFK 499
Query: 394 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIH 573
V+A+HGD DQ R +++F++G VLI TD+ ARG+D++ + V+NYD+ + + ++H
Sbjct: 500 VAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVH 559
Query: 574 RIGRGGR 594
RIGR GR
Sbjct: 560 RIGRTGR 566
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 128 bits (309), Expect = 1e-28
Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD M GF QI + + + D Q+++ SAT P V + +R F++ P+ I+
Sbjct: 291 VTFVVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEII 350
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCD--LYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I+Q IE ++ K+E L L + +IF T++ D L +++
Sbjct: 351 CGGRSQVSNTIEQIVEVIETKK-KIERLISIVLEQNNKGGRIIIFTETQKNCDELYQNLM 409
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSR-VLITTDLLARGIDVQQVSCVINYDLPTN 555
ER+ +HG +DQ +R+ +++F++G R +LITT L ARG+DV+ + VINYD P +
Sbjct: 410 ERNINCLLLHGGIDQIDRQNTIQEFKSGIGRTILITTSLCARGLDVKGLELVINYDCPNH 469
Query: 556 RENYIHRIGRGGR 594
E+Y+HR+GR GR
Sbjct: 470 LEDYVHRVGRTGR 482
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 128 bits (309), Expect = 1e-28
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Frame = +1
Query: 4 RGLRA-STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCF 180
RG+ + S +LDEAD ML GF+ Q+ D+ + D Q ++ +AT P + + + F
Sbjct: 293 RGVTSLSRCTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGF 352
Query: 181 MRDPVRILVQKEELTL-EGIKQFYIAIELEEWKLETLCDLYDTL-SIAQAVIFCNTRRKV 354
M P++I + +L E +KQ I + E + + ++ + S + +IF T+R
Sbjct: 353 MFHPLQINIGNPDLHANESVKQI-IEVCQERDRDSKMNEIVKRIGSEKKVLIFVKTKRSA 411
Query: 355 DWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI 534
D L + ++ + V+ MHGD Q ER+ + F++G+ LI TD+ +RG+D++ + VI
Sbjct: 412 DNLCYKLRDQRYRVACMHGDKVQAERDRALSDFKSGAVNYLIATDVASRGLDIRNIEIVI 471
Query: 535 NYDLPTNRENYIHRIGRGGR 594
NY++P++ ENYIHRIGR GR
Sbjct: 472 NYEMPSDIENYIHRIGRTGR 491
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 128 bits (309), Expect = 1e-28
Identities = 70/195 (35%), Positives = 108/195 (55%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S +++ VLDEADEMLS GF++++ + Q +L SAT+P ++ +M++
Sbjct: 140 LDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKN 199
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV I V K+E + + +LE L DL S +A++F T+ + + + +
Sbjct: 200 PVLINVIKDEPVTYEEEAVPAPVR---GRLEVLSDLLYVASPDRAMVFTRTKAETEEIAQ 256
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ A+HGD+ Q ERE ++ FR G RVL+ TD+ ARG+D+ QV V++Y LP
Sbjct: 257 GLLRLGHLAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRLP 316
Query: 550 TNRENYIHRIGRGGR 594
E Y HR GR GR
Sbjct: 317 DRAEAYQHRSGRTGR 331
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 128 bits (309), Expect = 1e-28
Identities = 70/196 (35%), Positives = 114/196 (58%), Gaps = 1/196 (0%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L S +K VLDEADEML GF + I + + D Q L SATMP + ++ + +D
Sbjct: 144 LDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTALFSATMPHQIKRITDQYQKD 203
Query: 190 PVRILVQKEELTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
PV+I ++ L+ I+Q + A L+ KL+ L + + +IF TR + +L+
Sbjct: 204 PVKIEIKASHSELQQIEQLVWRARGLD--KLDGLTRILEIEDWNAIIIFVRTRVECQFLS 261
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
E + R + +A+ G++ Q++RE I+ + G ++I TD+ ARGID+++++ VIN+D+
Sbjct: 262 EKLAARGYAATALSGEVAQKQREDILSAMKKGKLDIIIATDVAARGIDIERITHVINWDI 321
Query: 547 PTNRENYIHRIGRGGR 594
P + Y HRIGR GR
Sbjct: 322 PGDVSTYTHRIGRTGR 337
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 128 bits (309), Expect = 1e-28
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L +K+ +LDEADEML GF + + A Q +L SATMP V+ ++R +M
Sbjct: 185 LSLKNVKIVILDEADEMLDLGFLPDVETLIAGTPAVRQTLLFSATMPGPVIAMARRYMTQ 244
Query: 190 PVRILV---QKEELTLEGIKQF-YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
P I E LT I+Q Y A ++ K+E + + + +IF T+R
Sbjct: 245 PTHIRAADPDDEGLTKRDIRQLIYRAHSMD--KIEVVARILQARGRGRTIIFTKTKRTAA 302
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
+ E + +R F +A+HGD+ Q RE +R FR VL+ TD+ ARGIDV V+ VIN
Sbjct: 303 KVAEELVDRGFAAAAIHGDLGQGAREQALRAFRNNKVDVLVATDVAARGIDVDDVTHVIN 362
Query: 538 YDLPTNRENYIHRIGRGGR 594
Y + + Y+HR+GR GR
Sbjct: 363 YQCVEDEKIYLHRVGRTGR 381
>UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 57 - Arabidopsis thaliana (Mouse-ear cress)
Length = 541
Score = 128 bits (309), Expect = 1e-28
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 ARGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQVILLSATMPDDVLEVSRC 177
A+ + S ++ VLDE+D++ + QI V K S + L SAT+PD V E++R
Sbjct: 275 AKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARS 334
Query: 178 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 357
M D VR+++ ++ E +KQ + EE KL L + +IF ++ +
Sbjct: 335 IMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQSKERAK 394
Query: 358 WLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVIN 537
L + + + +H D+ ERE + QFR G VLI TD++ARG+D + ++CVIN
Sbjct: 395 ELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVIN 454
Query: 538 YDLPTNRENYIHRIGRGGR 594
YD P + YIHRIGR GR
Sbjct: 455 YDFPDSASAYIHRIGRSGR 473
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 128 bits (309), Expect = 1e-28
Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD ML GF+ QI + + D Q ++ SAT P +V ++ F++D +++
Sbjct: 282 VTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVN 341
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTL---SIAQAVIFCNTRRKVDWLTESM 375
+ EL + + E K + + + + + +IF T+R D +T +
Sbjct: 342 IGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFL 401
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ + ++HGD Q ER+ ++ QF+TG S +++ TD+ +RGIDV+ ++ V+NYD P N
Sbjct: 402 RQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNN 461
Query: 556 RENYIHRIGRGGR 594
E+YIHRIGR GR
Sbjct: 462 SEDYIHRIGRTGR 474
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 128 bits (308), Expect = 1e-28
Identities = 71/193 (36%), Positives = 110/193 (56%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+K FV+DEAD L GF I V + DVQ+ SAT+P + R +M P +I+
Sbjct: 149 VKTFVIDEADMTLDMGFLSDIDQVASKMPKDVQIAAFSATIPVKLSNFLRKYMAHPDQIV 208
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQ---AVIFCNTRRKVDWLTESM 375
+ + IK I I ++ K LY L++ Q A++F NT++KVD LT+ +
Sbjct: 209 IDNPSIIAPTIKNDLIDIGSKDRKNV----LYKVLTMGQPYLALVFANTKQKVDELTKFL 264
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
++ V+ +HG + +RER+ +RQ G + ++ +DL ARG+D+ VS V+NY++P +
Sbjct: 265 QDQGLKVAKIHGGVTERERKRTLRQVEQGQYQYVVASDLAARGLDIDGVSLVVNYEIPRD 324
Query: 556 RENYIHRIGRGGR 594
E IHRIGR GR
Sbjct: 325 IEFVIHRIGRTGR 337
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 128 bits (308), Expect = 1e-28
Identities = 65/197 (32%), Positives = 110/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+GLR K VLDEAD+ML GF + + ++ D Q +L SATM ++ +++ ++
Sbjct: 244 KGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYL 303
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DPV++ V E T++ I+Q + + + L L + + ++F T+ D L
Sbjct: 304 TDPVQVSVTPENSTVDKIEQSLMHLSKQNKGL-ALQRIISANPKKRVIVFSRTKHGSDKL 362
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + ++ A+HG+ Q +R+ + F+ G + +LI TD+ ARGID+ + VIN+D
Sbjct: 363 VKWLGTQNIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAARGIDIPGIEIVINFD 422
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR R
Sbjct: 423 LPNVPESYVHRIGRTAR 439
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 128 bits (308), Expect = 1e-28
Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 1/191 (0%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ V+DEAD M GF+ Q+ + + + D Q ++ SAT P V ++R +++ + I+
Sbjct: 248 VSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIARKLLQNSIEIV 307
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDWLTESMHE 381
V + I Q I + E+ K +L + D + QA++F NT+ + + L +++
Sbjct: 308 VGLRNVVTPNINQS-ILVTNEDNKFNSLLKILGDYTTQGQALVFTNTQDRAEDLFGKLNK 366
Query: 382 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
++V +HG MD +R I+ FR G VL+ T + ARGID+ + CVINYD P +
Sbjct: 367 SGYSVGLLHGSMDSPDRNSILHDFREGRFSVLVLTSVGARGIDIASIICVINYDAPDHEA 426
Query: 562 NYIHRIGRGGR 594
+Y+HR+GR GR
Sbjct: 427 DYVHRVGRTGR 437
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 127 bits (307), Expect = 2e-28
Identities = 65/193 (33%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S ++ FVLDEAD ML GF I + Q +L SAT+ +V+ ++ F+ +PV
Sbjct: 144 SNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVE 203
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLY-DTLSIAQAVIFCNTRRKVDWLTESM 375
I + E++ E I Q + + EE K+ + +L ++ Q +IF N + + + ++
Sbjct: 204 IQINPEKIITERIDQKIVHLGREE-KIPYMTNLIINSKEEGQGIIFTNYKANIPKIVYTL 262
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ V+ + ++DQ++R ++R F++G R ++ TD+ +RGIDV+ + V NYDLP +
Sbjct: 263 RKYGVPVTGISSELDQKKRLRLLRDFKSGKYRYMVATDVASRGIDVENIDIVYNYDLPQD 322
Query: 556 RENYIHRIGRGGR 594
ENY+HRIGR R
Sbjct: 323 TENYVHRIGRTAR 335
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 127 bits (307), Expect = 2e-28
Identities = 69/195 (35%), Positives = 107/195 (54%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L + IK +LDEADE+L GF + I + + Q +L SATMPDD+ ++++ + +
Sbjct: 139 LSFARIKCVILDEADELLKVGFLEDIEFILSCIRHKHQTLLFSATMPDDIKKLTQDCLHE 198
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
P I + + E I+ ++ + ++ K E L + QA+IFCN R VD L
Sbjct: 199 PQYISLVTKRSAPESIEHYFSYVNPKQ-KHEELVKYLKGEEVNQALIFCNARHMVDSLFR 257
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + + MH + Q +R I+R+FR+ R LI +D+ RG+D VS VIN+D+P
Sbjct: 258 LLRKDFHDIEYMHAGLAQDKRSSIIRRFRSQKIRYLIASDVAGRGLDFSHVSHVINWDMP 317
Query: 550 TNRENYIHRIGRGGR 594
+ E Y HR GR GR
Sbjct: 318 RDGEQYTHRTGRAGR 332
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 127 bits (307), Expect = 2e-28
Identities = 63/195 (32%), Positives = 113/195 (57%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
+R +++ +LDEAD+ML GF D++ ++ + L Q +L SAT+P V +++ F+
Sbjct: 146 VRLVELEMLILDEADKMLDLGFADELKELLEALPKKRQNLLFSATLPQKVQQLAEEFLNA 205
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
V + + ++++T + I+Q I ++ + + L L+ +IF +++R L
Sbjct: 206 AVELRISRDQITGDNIEQRVIEVDAN-LRRQVLQKLFKDEQWKHTIIFVSSKRSAFNLAN 264
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + HGD+ Q ER ++++F+ +LI TD+ ARGID+ ++S VINYDLP
Sbjct: 265 KLKKAGIQAQDFHGDLTQDERIKVLKRFQNKDFPILIATDIAARGIDISKLSHVINYDLP 324
Query: 550 TNRENYIHRIGRGGR 594
+ +Y+HRIGR GR
Sbjct: 325 RSPMDYVHRIGRTGR 339
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 127 bits (307), Expect = 2e-28
Identities = 70/191 (36%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQK- 213
VLDEAD ML GF+ QI +FK+ + Q ++ +AT P V +++ F P+ I +
Sbjct: 256 VLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPIHIQIGSG 315
Query: 214 -EELTL-EGIKQFYIAIELEEWKLETLCDLYDTLSIAQA-VIFCNTRRKVDWLTESMHER 384
++LT + I Q +E EE + L L + ++F T+R+ D+L + +
Sbjct: 316 GDKLTANKSITQTVEVVEEEEKFDRCVAILKKELGKNETCIMFAGTKRRCDFLDRRLKQV 375
Query: 385 DFT-VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 561
F+ ++HGD DQ ERE+++ FR G +L+ TD+ ARG+D+ V+ VI YD P E
Sbjct: 376 GFSSAGSIHGDKDQYEREMVLDNFRRGRGNILVATDVAARGLDIPGVAAVIVYDFPLQVE 435
Query: 562 NYIHRIGRGGR 594
+Y+HRIGR GR
Sbjct: 436 DYVHRIGRTGR 446
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 127 bits (306), Expect = 2e-28
Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLS--ADVQVILLSATMPDDVLE-VSRCFMRDPV 195
++ F+LDEAD ML GF++ + + S A Q +L SAT+ L+ V + DP
Sbjct: 146 VEYFILDEADRMLDMGFEEDVLTIANACSGKAKPQTLLFSATLQQRGLKHVIKQIQNDPE 205
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM 375
I+V I+Q Y+ + ++ K L L QA+IF NT+ K + +
Sbjct: 206 EIVVDSFRGEHSNIEQHYMLADDDKHKQRILTWLLSNEEYRQAIIFTNTKEKTEQTYHFL 265
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ V +HGDM Q ER +M Q R G +VL+ TD+ ARG+D+Q + VIN+D+ +
Sbjct: 266 SYHNVEVGYLHGDMTQDERNHVMTQMRNGRFKVLVATDVAARGLDIQSIDLVINFDMARS 325
Query: 556 RENYIHRIGRGGR 594
++Y+HRIGR GR
Sbjct: 326 GDDYVHRIGRTGR 338
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 127 bits (306), Expect = 2e-28
Identities = 66/192 (34%), Positives = 113/192 (58%), Gaps = 2/192 (1%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSA--DVQVILLSATMPDDVLEVSRCFMRDPVR 198
++ V+DEAD M GF + + + L Q +L SAT+ V+E++ FM P +
Sbjct: 149 VEALVIDEADRMFDMGFIADLRFILRRLPPYDKRQNLLFSATLNTRVMELAYEFMNMPEK 208
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ V E++T E ++Q + +E K L L + + + +IF NT+R+ ++L + ++
Sbjct: 209 VSVTPEQMTAERVEQVLYHVSRKE-KFPLLLGLLRKMGMERTMIFVNTKREAEYLQDRLN 267
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+F + GD++QR+R I+ F+ G+ ++I TD+ +RGI ++ VS VINYDLP +
Sbjct: 268 ANEFPGKVISGDVEQRKRMKILADFKDGTLPIMIATDVASRGIHIEGVSHVINYDLPQDC 327
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR R
Sbjct: 328 EDYVHRIGRTAR 339
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 127 bits (306), Expect = 2e-28
Identities = 75/204 (36%), Positives = 125/204 (61%), Gaps = 9/204 (4%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
L +K+ VLDEAD ++ + +QI + ++L ++V+V L SAT V E+ + ++
Sbjct: 204 LSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCLFSATFSMGVEELIKKIVQ 263
Query: 187 DP-VRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
DP I ++++EL++E I Q++I E+ K L D+Y +S+ Q+++F +T +
Sbjct: 264 DPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIYGFISVGQSIVFVHTIATAKSV 323
Query: 364 TESMHERDFTVSAMHG-DMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
+ M + +VS ++G D+ ER ++ F+ G S+VLITT++LARGID+ QVS VINY
Sbjct: 324 HQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDGKSKVLITTNVLARGIDIPQVSLVINY 383
Query: 541 DLPTNR------ENYIHRIGRGGR 594
D+P + +Y+HRIGR GR
Sbjct: 384 DVPLDEMGKPDPVHYLHRIGRVGR 407
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 127 bits (306), Expect = 2e-28
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L+ ++ VLDEAD+ML+ GF++ + + + L Q +L SATMP V +++R ++
Sbjct: 246 RSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYL 305
Query: 184 RDPVRI-LV-QKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKV 354
+P+ I LV ++E EGIK + IA K L DL + + ++F T+R
Sbjct: 306 DNPLNIDLVGDQDEKLAEGIKLYAIATTSTS-KRTILSDLITVYAKGGKTIVFTQTKRDA 364
Query: 355 DWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI 534
D ++ ++ A+HGD+ Q +RE + FR G VL+ TD+ +RG+D+ V VI
Sbjct: 365 DEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVI 423
Query: 535 NYDLPTNRENYIHRIGRGGR 594
+Y+LP + E ++HR GR GR
Sbjct: 424 HYELPNDPETFVHRSGRTGR 443
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 126 bits (305), Expect = 3e-28
Identities = 67/192 (34%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Frame = +1
Query: 22 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRI 201
+I VLDEAD+ML GF+ QI + + D Q ++ SAT P + +++R ++++P+ +
Sbjct: 452 SITYLVLDEADKMLDLGFEGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIV 511
Query: 202 LVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVDWLTESMH 378
V +L + I + EE K + + L+ +A+IF + + D L+ +
Sbjct: 512 YVGTLDLVAVHTVKQDIIVTTEEEKRTLIQEFLRNLAPEDKAIIFVSRKLVADDLSSDLS 571
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ V ++HG+ +Q +RE + FR+G ++LI TDL ARG+DV+ V+ V NYD P N
Sbjct: 572 IQGVPVQSLHGNREQFDREQALDDFRSGRVKILIATDLAARGLDVRDVTHVYNYDSPKNL 631
Query: 559 ENYIHRIGRGGR 594
E Y+HR+GR GR
Sbjct: 632 EEYVHRVGRTGR 643
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 126 bits (305), Expect = 3e-28
Identities = 63/196 (32%), Positives = 105/196 (53%)
Frame = +1
Query: 7 GLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMR 186
GLR + + VLDEAD +L GF Q+ + + Q ++ SAT DD+ ++ MR
Sbjct: 157 GLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCSATFSDDLKLKAQQLMR 216
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
P ++ E + +++ + K + L L Q ++F + D LT
Sbjct: 217 APTQVSANPENSINQAVQETLYLVNKGS-KTQALVALLKQHQWPQVLVFIGAKENADSLT 275
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ +++ + +HGD Q ERE + +F+ G+++VLI TDLLARGI ++ + VIN++L
Sbjct: 276 KKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARGIHIELLPVVINFEL 335
Query: 547 PTNRENYIHRIGRGGR 594
P + E Y+HR+GR R
Sbjct: 336 PMHAETYVHRVGRTAR 351
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 126 bits (305), Expect = 3e-28
Identities = 70/192 (36%), Positives = 105/192 (54%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +K+ VLDEAD ML GF D I + A Q +L SAT+ + ++ ++DP R
Sbjct: 211 SELKMLVLDEADRMLDMGFIDDIDTIVAATPATRQTMLFSATLDGKIGSLTNRLLKDPER 270
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I + ++ + I Q ++ + K L L +++ QA+IF T+ D L +
Sbjct: 271 IEITQKIESRSNIAQTVHYVDDRDHKDRLLDHLLRDVALDQAIIFTATKIDADQLAGRLA 330
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ F +A+HGD+ Q R +R R RVL+ TD+ ARGID+ ++ V NYDLP
Sbjct: 331 DAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFA 390
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 391 EDYVHRIGRTGR 402
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 126 bits (305), Expect = 3e-28
Identities = 62/190 (32%), Positives = 101/190 (53%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+++ VLDEAD ML GF + + +L + Q +L SAT ++ +++ ++R+P I
Sbjct: 162 VQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIE 221
Query: 205 VQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
V + + Q + E K + L S+ Q ++FCN++ L +
Sbjct: 222 VARSNAAASTVTQIVYDVA-EGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERD 280
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+A+HGD Q ER + F+ G L+ TD+ ARG+D+ ++ VIN+DLP N E+
Sbjct: 281 GIIAAAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAED 340
Query: 565 YIHRIGRGGR 594
Y+HRIGR GR
Sbjct: 341 YVHRIGRTGR 350
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 126 bits (305), Expect = 3e-28
Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 2/197 (1%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
++ + +K+ VLDEAD ML GF I DV K L A Q + SAT+ +++ +++ +++
Sbjct: 143 IKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPARHQTLFFSATINEEIKKLAYSLVKN 202
Query: 190 PVRILVQKEELTLEGIKQF--YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P+RI + ++ + I +I ++ + + LE L + ++ ++F T+ + D +
Sbjct: 203 PIRIQIAPKDRVSKNITHSVAFIGMDDKRFFLERLLKEHPE---SKVIVFVRTQVRADRV 259
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+M MHG +Q+ R+ M F+ G+ VLI TD+ ARGID+ V V+NYD
Sbjct: 260 QAAMERVGLKSVTMHGGKEQQARDAAMDAFKNGTVHVLIATDISARGIDIAGVEYVVNYD 319
Query: 544 LPTNRENYIHRIGRGGR 594
+P ENY+HR+GR GR
Sbjct: 320 MPEVAENYVHRVGRTGR 336
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 126 bits (305), Expect = 3e-28
Identities = 65/192 (33%), Positives = 109/192 (56%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S +++FVLDEAD ML GF + I + K+ Q +L SAT+P+ + E+S+ +++ +
Sbjct: 148 SQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKKQTLLFSATIPEKIDELSKSIVKNATK 207
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + EE T + I Q + + K + L + +IF T+ VD L +++
Sbjct: 208 VDINPEETTAKNIGQLLYYLPKKN-KTDLCLHLLRNTINGKIIIFRRTKFAVDKLEQTLI 266
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ + V+++HGD Q R + F++ + +LI TD+ ARGID+ V +IN+D+P
Sbjct: 267 KNGYNVASIHGDKTQGVRNKAIEDFKSKKASILIATDVAARGIDITNVDAIINFDIPNVP 326
Query: 559 ENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 327 EIYVHRIGRTGR 338
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 126 bits (305), Expect = 3e-28
Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L I V+DEAD ++ GF+ QI +F + D QV+ SAT P V + +R
Sbjct: 282 LSLKNISFLVVDEADRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRT 341
Query: 190 PVRILVQKEELTL-EGIKQFYIAIELEEWKLETLCD----LYDTLSIAQAVIFCNTRRKV 354
P+R+ + +LT + I Q + + + K++ L D +Y AQ +IF T++
Sbjct: 342 PIRLQIGSSQLTANKNISQKFKIVPTDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGA 401
Query: 355 DWLTESMHER--DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 528
D L + + + +HGD+DQ RE I++ F+ +++ TD+ +RG+D++ +S
Sbjct: 402 DTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQDFKNKRLDIVVATDVASRGLDIKGISH 461
Query: 529 VINYDLPTNRENYIHRIGRGGR 594
VIN+ LP++ E Y+HRIGR GR
Sbjct: 462 VINFSLPSDCETYVHRIGRTGR 483
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 126 bits (305), Expect = 3e-28
Identities = 62/186 (33%), Positives = 106/186 (56%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD +L GF+ QIH + D Q ++SAT P+ + +++ + P+ I+V ++
Sbjct: 724 VLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVGEK 783
Query: 217 ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTV 396
T I QF +E ++ L L + + +IF N + + D L + + ++
Sbjct: 784 GKTNNNIYQFVEVLEEKKKLFRLLKLLGEWIKYGLILIFVNKQLEADLLYLELFKYEYKT 843
Query: 397 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHR 576
+HG DQ +RE ++ F+ +++LI T ++ARGID++ + VINY+ P + E+YIH+
Sbjct: 844 LVLHGGQDQSDREHTLKSFKDEQNKILIATSVMARGIDIKNIILVINYECPDHIEDYIHK 903
Query: 577 IGRGGR 594
IGR GR
Sbjct: 904 IGRTGR 909
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 126 bits (305), Expect = 3e-28
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD M GF+ Q+ +F + D Q IL SATMP + +++ +++P+ + V
Sbjct: 752 VLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGR 811
Query: 217 ELTLEGIKQFYIAIELEEWK----LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ + I+Q + + E K LE L +LYD A+ +IF + K D L + + +
Sbjct: 812 SVVAKEIEQI-VEVRDEPSKFHRVLELLGELYDRDEDARTLIFVERQEKADDLLKELMMK 870
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+ ++HG DQ +R+ + F+ G +LI T + ARG+DV+Q+ VINYD P + E+
Sbjct: 871 GYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLED 930
Query: 565 YIHRIGRGGR 594
Y+HR GR GR
Sbjct: 931 YVHRAGRTGR 940
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 126 bits (304), Expect = 4e-28
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV----QVILLSATMPDDVLEVSRCFMR 186
S+++ + DEAD ML GF+ QI ++ + Q ++ SAT P + ++ F+
Sbjct: 285 SSVRYLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLD 344
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA--QAVIFCNTRRKVDW 360
D V I V + T+E I+Q + +E EE K E + D+ + + VIF T+R D
Sbjct: 345 DYVFITVGRAGSTVESIQQIILWVE-EEIKQEAILDVLGEFAGKGQKTVIFVETKRGADI 403
Query: 361 LTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 540
L +++ + V ++HGD Q +R+ +++F+ ++L+ TD+ +RG+D+ + VINY
Sbjct: 404 LENYLYDHGYKVDSIHGDRSQADRDFSLKRFKENVIQLLVATDVASRGLDIPDIEVVINY 463
Query: 541 DLPTNRENYIHRIGRGGR 594
D+P E+Y+HR+GR GR
Sbjct: 464 DMPNEIESYVHRVGRTGR 481
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 126 bits (304), Expect = 4e-28
Identities = 68/195 (34%), Positives = 102/195 (52%)
Frame = +1
Query: 10 LRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRD 189
L I+ FVLDEAD ML GF I + L Q + SATMP ++ ++ + +
Sbjct: 225 LHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKKKQSLFFSATMPPEITRLAASILHN 284
Query: 190 PVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTE 369
PV + V T+E I Q ++ K L L I A++F T+ D + +
Sbjct: 285 PVEVSVTPVSSTVEIINQQIFFVDKGN-KNNLLVHLLKNQDIKTALVFTRTKHGADKVVK 343
Query: 370 SMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 549
+ + D T +A+HG+ Q R+ + F+ + RVL+ TD+ ARGIDV ++ VIN+D+
Sbjct: 344 YLLKHDITAAAIHGNKAQNARQRALTNFKEQTMRVLVATDIAARGIDVDELEYVINFDMS 403
Query: 550 TNRENYIHRIGRGGR 594
E Y+HRIGR GR
Sbjct: 404 NIAETYVHRIGRTGR 418
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 126 bits (304), Expect = 4e-28
Identities = 67/197 (34%), Positives = 101/197 (51%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R L +++ V DEAD ML GF D + + +L Q +L SAT + +R +
Sbjct: 141 RALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQTLLFSATFSKQIKHFAREML 200
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P I V T++ + Q + IE + K L L +Q ++F T+R D L
Sbjct: 201 NAPKTIEVSAVNSTVDLVAQTFHPIE-QARKSAALIQLIQQHRWSQTLVFIRTKRTADAL 259
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ + +++H + Q R + F+ G +VL+ TD+ ARGIDV Q+ CV+NYD
Sbjct: 260 VTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQVLVATDIAARGIDVSQLPCVVNYD 319
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR GR
Sbjct: 320 LPYVPEDYVHRIGRTGR 336
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 126 bits (304), Expect = 4e-28
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDV---FKML-SADVQVILLSATMPDDVLEVS 171
R + + +K +LDEAD ML GF +I + F M D ++ SAT P ++ ++
Sbjct: 499 RKISLANLKYLILDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLA 558
Query: 172 RCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRK 351
F+ + V + + K T I Q + +E E K + L ++ DT + ++F T+R
Sbjct: 559 AEFLNNYVYLTIGKVGGTHSDITQCIMEVE-ESAKRDKLIEILDTEGTNRNLVFVQTKRL 617
Query: 352 VDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCV 531
D+L + + F +++HGD Q++RE + +F+ G+ VLI T + ARG+D+ V V
Sbjct: 618 ADFLASYLCQNGFHTTSIHGDRLQQQREEALAEFKAGTQHVLIATAVAARGLDIADVKQV 677
Query: 532 INYDLPTNRENYIHRIGRGGR 594
INYDLP E YIHRIGR GR
Sbjct: 678 INYDLPDEIEEYIHRIGRTGR 698
>UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Rok1p, eIF4A-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 480
Score = 126 bits (304), Expect = 4e-28
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Frame = +1
Query: 31 LFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVLEVSRCFMRDPVR 198
+ VLDE D++L GF QI ++ + VQ+ SAT+P V+ ++ M+ PV+
Sbjct: 234 MIVLDEVDKLLDMGFAPQIDEILSHSNIPKGGKVQIAAFSATLPQIVINLADSIMKSPVK 293
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIA-QAVIFCNTRRKVDWLTESM 375
+ + I Q + + ++ K+E+L L I ++F N++ L + +
Sbjct: 294 VTLGHRLAASSTIIQELVCVTKDDAKIESLRQLIKQGKIMLPTLVFTNSKDDAQRLFKKL 353
Query: 376 HERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 555
+ V A+H DM + +R+ I+++FRTG +LI TDL+ARG+D + VSCV+NYD P +
Sbjct: 354 MYDNLIVEAIHSDMPKVKRDNIIQRFRTGKIWILICTDLMARGVDFKNVSCVVNYDFPHS 413
Query: 556 RENYIHRIGRGGR 594
NYIHR+GR GR
Sbjct: 414 PSNYIHRVGRCGR 426
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 126 bits (304), Expect = 4e-28
Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFK---MLSADV-QVILLSATMPDDVLEVSRCFMR 186
+ IK VLDEAD ML GF+ QI + + M S + Q ++ SAT P D+ ++R F+
Sbjct: 310 ANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLD 369
Query: 187 DPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLT 366
+ + + V + T E I Q + ++ + K L DL +IF T+R D LT
Sbjct: 370 NYIFLSVGRVGSTSENITQRILYVDDMD-KKSALLDLLSAEHKGLTLIFVETKRMADQLT 428
Query: 367 ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 546
+ + ++F +A+HGD Q ERE + F+ + +L+ T + ARG+D+ V+ VINYDL
Sbjct: 429 DFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDL 488
Query: 547 PTNRENYIHRIGRGGR 594
P++ ++Y+HRIGR GR
Sbjct: 489 PSDIDDYVHRIGRTGR 504
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 126 bits (303), Expect = 5e-28
Identities = 69/194 (35%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Frame = +1
Query: 25 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRIL 204
+ VLDEAD ML GF+ QI + + Q ++ +AT P +V +++ + +P ++
Sbjct: 308 VSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVN 367
Query: 205 VQK-EELTL-EGIKQ-FYIAIELEEW-KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 372
+ +EL + I Q + +E+ +LE + + S + +IFC+T+R D L +
Sbjct: 368 IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGS--KIIIFCSTKRMCDQLARN 425
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
+ R F +A+HGD Q ER+ ++ QFR+G + VL+ TD+ ARG+DV+ + V+NYD P
Sbjct: 426 L-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPN 484
Query: 553 NRENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 485 GVEDYVHRIGRTGR 498
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 126 bits (303), Expect = 5e-28
Identities = 61/197 (30%), Positives = 111/197 (56%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+G +K V+DEAD +L+ F+ ++ + K++ D + L SATM V ++ R +
Sbjct: 161 KGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAAL 220
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
++PV+ V + T+E ++Q+YI I ++K L + + L+ +IFC+T
Sbjct: 221 KNPVKCAVSSKYQTVEKLQQYYIFIP-SKFKDTYLVYILNELAGNSFMIFCSTCNNTQRT 279
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ FT +HG M Q +R + +F+ + +L+ TD+ +RG+D+ V V+N+D
Sbjct: 280 ALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFD 339
Query: 544 LPTNRENYIHRIGRGGR 594
+PT+ ++YIHR+GR R
Sbjct: 340 IPTHSKDYIHRVGRTAR 356
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 125 bits (302), Expect = 7e-28
Identities = 70/192 (36%), Positives = 103/192 (53%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
S IK F LDEADE+L GF ++I + L Q +AT + ++S+ +
Sbjct: 142 SHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFFFTATFDEKTKKLSQEITNEAKM 201
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
I + T E I Q ++ + EE KL TL D +VIF T+R+VD L ++
Sbjct: 202 ISMSSGLETTEKIDQNFVVVSEEE-KLITLVKFLDFKKPTASVIFGRTKRRVDELASALQ 260
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
E F+ + GDM Q++R ++ +F+ +++ TD++ARGIDV V V N+DLP
Sbjct: 261 ELGFSAVGIQGDMVQKDRTSVLNRFKDQKVNIIVATDVMARGIDVSHVDLVFNFDLPEEI 320
Query: 559 ENYIHRIGRGGR 594
E Y HRIGR GR
Sbjct: 321 EYYTHRIGRTGR 332
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 125 bits (302), Expect = 7e-28
Identities = 64/197 (32%), Positives = 106/197 (53%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
R ++ +K VLDEADEML+ GFK+ I + + L SATM ++ + +M
Sbjct: 151 REVKLDALKYMVLDEADEMLNMGFKEDIDFILSKSDTGRNIWLFSATMAREIKRIVDTYM 210
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
P + + + + + I+ I ++ + K+E L D V+FC T+R +
Sbjct: 211 VQPEEVRINPKNIVNKNIEHQSIQLKASD-KIEALRRFLDYDEDMFGVVFCRTKRDTQNV 269
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
+ ++ + A+HGDM Q +R+ M++FR + ++LI TD+ ARGIDV ++ VI++
Sbjct: 270 ADQLNNNGYATEALHGDMSQAQRDAAMKRFRNKNLKLLIATDVAARGIDVDDITHVIHFA 329
Query: 544 LPTNRENYIHRIGRGGR 594
LP + E Y HR GR R
Sbjct: 330 LPDDPEFYTHRSGRTAR 346
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 125 bits (302), Expect = 7e-28
Identities = 63/197 (31%), Positives = 109/197 (55%)
Frame = +1
Query: 4 RGLRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFM 183
+ +R +++ VLDEAD ML GF I + +L Q +L SAT ++ ++++ +
Sbjct: 145 KAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAILPKKRQNLLFSATFSPEIRQLAKGLV 204
Query: 184 RDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWL 363
+P+ I V T ++Q+ ++ + K E L L QA++F T+ + +
Sbjct: 205 NNPIEISVTPRNATAVSVEQWLHPVDKKR-KTELLIQLIADGRWDQALVFSRTKHGANKI 263
Query: 364 TESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 543
T+ + + SA+HG+ Q R + F+ G R+L+ TD+ ARG+D++Q+ V+N+D
Sbjct: 264 TKQLEDAGIRASAIHGNKSQGARTRALADFKEGRIRILVATDIAARGLDIEQLPHVVNFD 323
Query: 544 LPTNRENYIHRIGRGGR 594
LP E+Y+HRIGR GR
Sbjct: 324 LPDVAEDYVHRIGRTGR 340
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 125 bits (302), Expect = 7e-28
Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 38/228 (16%)
Frame = +1
Query: 25 IKLFVLDEADEMLS--RGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
IKLFVLDEAD+++ Q+ + + L Q++L SAT D V + + F +
Sbjct: 300 IKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQILLFSATYNDSVRKFADQFAPKATK 359
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV----DWLT 366
I V++E+LTL+ +KQ+Y+ E +E K L +LY +++I+Q VIF N+++ +++T
Sbjct: 360 ISVRQEDLTLKCVKQYYLITENDEQKYYYLSELYCSMTISQCVIFVNSKKSAYNLYNFMT 419
Query: 367 ESMHE-----RDFTVSAMHGD---------MDQREREVIMRQFRTGSSRVLITTDLLARG 504
E+ H D +S + MD + R+ +M F+ G S+VLI TDLL+RG
Sbjct: 420 ENSHNVTLICADSIISRFTKNQIQKANVLGMDPKTRDTLMADFKKGISKVLICTDLLSRG 479
Query: 505 IDVQQVSCVINYDLP------------------TNRENYIHRIGRGGR 594
IDV +S VIN+DLP N E YIHRIGR GR
Sbjct: 480 IDVPSISLVINFDLPYIYQGRIGDTLNNTSNQRVNMETYIHRIGRTGR 527
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 125 bits (302), Expect = 7e-28
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD ML GF+ QI + L+ D + + SAT P ++ +++ F+ +P+ + V E
Sbjct: 237 VLDEADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGE 296
Query: 217 EL-TLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFT 393
EL T E I+Q + ++ E K E ++ + +IF T+R V L++ + +
Sbjct: 297 ELATNERIQQNVLLLQ-EHEKGEKCVEILKENQSKKIIIFAKTKRTVQQLSDFLKSKSIR 355
Query: 394 VSAMHGDMDQREREVIMRQFRTG-SSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYI 570
++HGD Q+ER V + +F+ + VL+ TD+ ARG+DV + V+NYD P + E+Y+
Sbjct: 356 CLSIHGDKTQQERVVALDKFKNARTGGVLVATDVAARGLDVTDIDLVLNYDFPGDIEDYV 415
Query: 571 HRIGRGGR 594
HRIGR R
Sbjct: 416 HRIGRTAR 423
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 125 bits (302), Expect = 7e-28
Identities = 64/190 (33%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Frame = +1
Query: 37 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVRILVQKE 216
VLDEAD M GF+ Q+ + + D Q +L SAT P + ++R ++ PV I V
Sbjct: 573 VLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGR 632
Query: 217 ELTLEGIKQFYIAIELEEWK----LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER 384
+ ++Q + + EE K LE L +LY+ + ++F + + D L + +R
Sbjct: 633 SVVASEVEQI-VEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKR 691
Query: 385 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNREN 564
+T +++HG DQ +R+ + ++ G VLI T ++ARG+DV+ + V+NYD P + E+
Sbjct: 692 GYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMED 751
Query: 565 YIHRIGRGGR 594
Y+HR+GR GR
Sbjct: 752 YVHRVGRTGR 761
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 125 bits (302), Expect = 7e-28
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
Frame = +1
Query: 28 KLFVLDEADEMLSRGFKDQIHDVFK---MLSADVQ-VILLSATMPDDVLEVSRCFMRDPV 195
K VLDEAD ML GF+ QI + + M V+ ++ SAT P ++ ++R F+ + +
Sbjct: 342 KYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYI 401
Query: 196 RILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTES 372
+ V + T E I Q + +E E K L DL + T + ++F T++ D L +
Sbjct: 402 FLAVGRVGSTSENITQKVVWVE-ESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDF 460
Query: 373 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 552
++ + +++HGD QR+RE + QFR+G S +L+ T + ARG+D+ V VIN+DLP+
Sbjct: 461 LYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPS 520
Query: 553 NRENYIHRIGRGGR 594
+ E Y+HRIGR GR
Sbjct: 521 DIEEYVHRIGRTGR 534
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 125 bits (301), Expect = 9e-28
Identities = 60/192 (31%), Positives = 108/192 (56%)
Frame = +1
Query: 19 STIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSRCFMRDPVR 198
ST+K VLDEADEML GF + + +F L Q +L SAT+P + E++ + +P
Sbjct: 165 STVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVLFSATLPHSIREIAEKHLHEPQH 224
Query: 199 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 378
+ + + T+ I Q ++ + ++ K + L + + F T++ L ++
Sbjct: 225 VKIAAKTQTVARIDQAHLMVHADQ-KTAAVLRLLEVEEFDALIAFVRTKQATLDLAGALE 283
Query: 379 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 558
+ + +A++GD+ Q +RE ++ + G +++ TD+ ARGIDV +++ V N D+P +
Sbjct: 284 AKGYKAAALNGDIAQNQRERVIESLKDGRLDIVVATDVAARGIDVPRITHVFNVDMPYDP 343
Query: 559 ENYIHRIGRGGR 594
E+Y+HRIGR GR
Sbjct: 344 ESYVHRIGRTGR 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,865,833
Number of Sequences: 1657284
Number of extensions: 12024551
Number of successful extensions: 34006
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 31652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33102
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -